Bean bushy stunt virus

Basic Information

Genus Begomovirus
NCBI Assembly GCF_018589415.1
Isolate Argentina
Release date 2021/6/1
Submitter Reyna,P., Bejerman,N., Laguna,G., Rodriguez Pardina,P.
Host
Download Genome |GFF3 |PEP |CDS

Genomic Organization

JBrowse

Genome

NC_055594
ACCGGATGGCCGCGCGATTTTTTTTACTTATACTGGCCCACAACTAACTGTACTCACCAATGAGAATGCGTCTGACGAGTCTAGATATTTGTAACTTGGTCGCTAAGTTGTGGGCCTACGTCTTTAAATTGAATGACGTTGCCCAAATGCTTTACTTCAAAATGCCTAAGCGGGATGCCCCATGGCGTAACATGGCGGGGACCTCCAAGGTAACCCGTAATGCTAATTATTCGCCTCGTGGTGGGCTAAAGGTCGACAAGGCCTCTGCTTGGGTGAATAGGCCCATGTACAGGAAGCCCAGGATCTATCGGACTCTCAGAGGCCCAGATGTTCCACGAGGCTGTGAAGGGCCTTGTAAGGTTCAATCCTACGAGCAACGTCATGACATCTCCCATGTTGGTAAGGTCATGTGTATTTCTGATGTTACTCGTGGTAACGGTATTACTCATCGTGTAGGAAAGCGTTTCTGTGTTAAGTCTGTGTACATATTAGGGAAGATCTGGATGGATGAGAACATCAAGTTGAAGAACCACACCAACAGTTGCATGTTTTGGTTGGTTCGAGACCGACGACCATATGGAACACCCATGGATTTCGGACAGGTATTCAATATGTTCGATAATGAGCCTAGCACTGCCACAGTCAAGAACGATCTACGTGATCGTTTCCAGGTTATGCACAAGTTCTACGCAAAGGTCACAGGTGGACAATATGCTAGTAACGAACAGGCGTTAGTCAAGCGTTTTTGGAAGGTCAACAATTATGTGGTTTATAACCACCAAGAAGCAGGGAAATACGAGAATCATACGGAAAACGCTTTATTATTGTATATGGCATGTACACATGCATCGAATCCTGTATACGCAACATTAAAAATTCGGATCTATTTCTATGATTCGATCACCAATTAATAAATTTTGAATTTTATTTCATGATTCTCAAGTACAACATTTACATAAGTTTTGTCTGTTGCAAAACTAACAGCTCTGATAACATTGTTAATACAAATAACACCTAAACGATCTAAATACAACATGACCAAATATTTAAATCTATTTAAATATGTCGTCCCAGAAACTGTCGTCAATGTCGTCCAGACTTGGAAATTGAGATAAGCCTTGTGGAGAGCCAACGCTTTCCTCAGGTTGTGGTTGAACCGGATCTGGACGTGGAAAATCCTCGTCCTGGTGTATACTGGGTCCTCTACGTGGTATATCCTGAAATAGAGGGGATTTTCTATCTCCCAGATATATACGCCACTCTCTGCTTGATGCGCAGTGATGCGTTCCCCGGTGCGTAAATCCATGGTCACTGCAGTTGATGTGAACGTAAATAGAGCAGCCACAAGGAAGGTCTATCCTTCTACGACGTGTTGCTCTTCTTTTAGCTGCTCTGTGCTGTGCTTTGATAGAGGGGGGCGTGGAGGAAGATAAATTTCGCATTATGAAGTGTCCACGATTTGAGAGATGCGTTTTCCTCTCTCTCAAGGAAATCTTTATAACTGGCCCCCTCTCCTGGATTGCACAGCACGATAGATGGGATCCCTCCTTTAATTTGAACTGGCTTTCCGTATTTGCAGTTTGATTGCCAGTCTCTTTGGGCCCCAATCAACTCTTTCCAATGCTTCAGCTTTAAATATTGCGGACTGACATCGTCAATGACGTTATACTCCACTGCATTGGAATAGACCTTTGAGTTAAAGTCGAGATGACCACTCAAATAATTATGTGGGCCTAGAGCACGTGCCCACATAGTCTTTCCGGTACGACTATCGCCCTCAATGATTATACTCACAGGTCTCGCCGGCCGCGCAGCGGCACCTCTCCCAAAATAATCGTCAGCCCAAGCTTTCATCTCATCTGGCACGTTAGTGAAGGAGGAGAGGTGAAACGGAGGAAGCCACGGTTCCGGAGCAACAGCAAACAACTTCTGGACATGTGTTCTTATTTTGTCCAGATGCAAAACATAATCTCTTGGCTGTTCTTCTCTTAATATATTGAGGGCCGTGGCTGCACAATCTGCGTTGAGAACCTTGGCATATGTATCGTTGGCAGATTGGCAACCTCCTCGAGCTGAACGTCCATCGACCTGGAAAACTCCATAATCAATGAAGTCTCCGTCTTTCTCCATATAGGTCTTGACATCTGAGGACGATTTAGCTCCCTGAATGTTCGGATGGAAATGTGCTGACCTTGATGGGGAAACCAAGTCGAAGAATCTTTGATTCTGGCATCTGTATTTTCCTTCGAACTGGATGAGCACGTGTAAATGAGGTTCCCCATCTTCGTGTAATTCTCTTGTTACACGAATGAACTTCTTATTAGTCGGCGTTTTTAACGCTTGCAACTGAGAAAGAGCTTCCTCTTTCGTTAATGAACAATGAGGGTATGTGAGAAAGAAGTTCTTCGCGTTAACTGAGAAGCGCTTCGGTGGTGGCATATTTGTAATATGAGAATGATCCCCAATTGCCTCCCCTTGAAACTTGGTGAAATGAATTGGGGAATGGGGATCAATTTATAGTAGAGTCCATTATAATTTTATGGGACACGTGGCGGCCATCCGCTATAATATT

Gene Information

NCBI Accession YP_010087836.1
Location 60-911
Protein Name CP
Coding Region ATGAGAATGCGTCTGACGAGTCTAGATATTTGTAACTTGGTCGCTAAGTTGTGGGCCTACGTCTTTAAATTGAATGACGTTGCCCAAATGCTTTACTTCAAAATGCCTAAGCGGGATGCCCCATGGCGTAACATGGCGGGGACCTCCAAGGTAACCCGTAATGCTAATTATTCGCCTCGTGGTGGGCTAAAGGTCGACAAGGCCTCTGCTTGGGTGAATAGGCCCATGTACAGGAAGCCCAGGATCTATCGGACTCTCAGAGGCCCAGATGTTCCACGAGGCTGTGAAGGGCCTTGTAAGGTTCAATCCTACGAGCAACGTCATGACATCTCCCATGTTGGTAAGGTCATGTGTATTTCTGATGTTACTCGTGGTAACGGTATTACTCATCGTGTAGGAAAGCGTTTCTGTGTTAAGTCTGTGTACATATTAGGGAAGATCTGGATGGATGAGAACATCAAGTTGAAGAACCACACCAACAGTTGCATGTTTTGGTTGGTTCGAGACCGACGACCATATGGAACACCCATGGATTTCGGACAGGTATTCAATATGTTCGATAATGAGCCTAGCACTGCCACAGTCAAGAACGATCTACGTGATCGTTTCCAGGTTATGCACAAGTTCTACGCAAAGGTCACAGGTGGACAATATGCTAGTAACGAACAGGCGTTAGTCAAGCGTTTTTGGAAGGTCAACAATTATGTGGTTTATAACCACCAAGAAGCAGGGAAATACGAGAATCATACGGAAAACGCTTTATTATTGTATATGGCATGTACACATGCATCGAATCCTGTATACGCAACATTAAAAATTCGGATCTATTTCTATGATTCGATCACCAATTAA
Protein Sequence MRMRLTSLDICNLVAKLWAYVFKLNDVAQMLYFKMPKRDAPWRNMAGTSKVTRNANYSPRGGLKVDKASAWVNRPMYRKPRIYRTLRGPDVPRGCEGPCKVQSYEQRHDISHVGKVMCISDVTRGNGITHRVGKRFCVKSVYILGKIWMDENIKLKNHTNSCMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATVKNDLRDRFQVMHKFYAKVTGGQYASNEQALVKRFWKVNNYVVYNHQEAGKYENHTENALLLYMACTHASNPVYATLKIRIYFYDSITN

NCBI Accession YP_010087837.1
Location 908-1306
Protein Name REn
Coding Region ATGGATTTACGCACCGGGGAACGCATCACTGCGCATCAAGCAGAGAGTGGCGTATATATCTGGGAGATAGAAAATCCCCTCTATTTCAGGATATACCACGTAGAGGACCCAGTATACACCAGGACGAGGATTTTCCACGTCCAGATCCGGTTCAACCACAACCTGAGGAAAGCGTTGGCTCTCCACAAGGCTTATCTCAATTTCCAAGTCTGGACGACATTGACGACAGTTTCTGGGACGACATATTTAAATAGATTTAAATATTTGGTCATGTTGTATTTAGATCGTTTAGGTGTTATTTGTATTAACAATGTTATCAGAGCTGTTAGTTTTGCAACAGACAAAACTTATGTAAATGTTGTACTTGAGAATCATGAAATAAAATTCAAAATTTATTAA
Protein Sequence MDLRTGERITAHQAESGVYIWEIENPLYFRIYHVEDPVYTRTRIFHVQIRFNHNLRKALALHKAYLNFQVWTTLTTVSGTTYLNRFKYLVMLYLDRLGVICINNVIRAVSFATDKTYVNVVLENHEIKFKIY

NCBI Accession YP_010087838.1
Location 1053-1442
Protein Name TrAP
Coding Region ATGCGAAATTTATCTTCCTCCACGCCCCCCTCTATCAAAGCACAGCACAGAGCAGCTAAAAGAAGAGCAACACGTCGTAGAAGGATAGACCTTCCTTGTGGCTGCTCTATTTACGTTCACATCAACTGCAGTGACCATGGATTTACGCACCGGGGAACGCATCACTGCGCATCAAGCAGAGAGTGGCGTATATATCTGGGAGATAGAAAATCCCCTCTATTTCAGGATATACCACGTAGAGGACCCAGTATACACCAGGACGAGGATTTTCCACGTCCAGATCCGGTTCAACCACAACCTGAGGAAAGCGTTGGCTCTCCACAAGGCTTATCTCAATTTCCAAGTCTGGACGACATTGACGACAGTTTCTGGGACGACATATTTAAATAG
Protein Sequence MRNLSSSTPPSIKAQHRAAKRRATRRRRIDLPCGCSIYVHINCSDHGFTHRGTHHCASSREWRIYLGDRKSPLFQDIPRRGPSIHQDEDFPRPDPVQPQPEESVGSPQGLSQFPSLDDIDDSFWDDIFK

NCBI Accession YP_010087839.1
Location 1384-2439
Protein Name Rep
Coding Region ATGCCACCACCGAAGCGCTTCTCAGTTAACGCGAAGAACTTCTTTCTCACATACCCTCATTGTTCATTAACGAAAGAGGAAGCTCTTTCTCAGTTGCAAGCGTTAAAAACGCCGACTAATAAGAAGTTCATTCGTGTAACAAGAGAATTACACGAAGATGGGGAACCTCATTTACACGTGCTCATCCAGTTCGAAGGAAAATACAGATGCCAGAATCAAAGATTCTTCGACTTGGTTTCCCCATCAAGGTCAGCACATTTCCATCCGAACATTCAGGGAGCTAAATCGTCCTCAGATGTCAAGACCTATATGGAGAAAGACGGAGACTTCATTGATTATGGAGTTTTCCAGGTCGATGGACGTTCAGCTCGAGGAGGTTGCCAATCTGCCAACGATACATATGCCAAGGTTCTCAACGCAGATTGTGCAGCCACGGCCCTCAATATATTAAGAGAAGAACAGCCAAGAGATTATGTTTTGCATCTGGACAAAATAAGAACACATGTCCAGAAGTTGTTTGCTGTTGCTCCGGAACCGTGGCTTCCTCCGTTTCACCTCTCCTCCTTCACTAACGTGCCAGATGAGATGAAAGCTTGGGCTGACGATTATTTTGGGAGAGGTGCCGCTGCGCGGCCGGCGAGACCTGTGAGTATAATCATTGAGGGCGATAGTCGTACCGGAAAGACTATGTGGGCACGTGCTCTAGGCCCACATAATTATTTGAGTGGTCATCTCGACTTTAACTCAAAGGTCTATTCCAATGCAGTGGAGTATAACGTCATTGACGATGTCAGTCCGCAATATTTAAAGCTGAAGCATTGGAAAGAGTTGATTGGGGCCCAAAGAGACTGGCAATCAAACTGCAAATACGGAAAGCCAGTTCAAATTAAAGGAGGGATCCCATCTATCGTGCTGTGCAATCCAGGAGAGGGGGCCAGTTATAAAGATTTCCTTGAGAGAGAGGAAAACGCATCTCTCAAATCGTGGACACTTCATAATGCGAAATTTATCTTCCTCCACGCCCCCCTCTATCAAAGCACAGCACAGAGCAGCTAA
Protein Sequence MPPPKRFSVNAKNFFLTYPHCSLTKEEALSQLQALKTPTNKKFIRVTRELHEDGEPHLHVLIQFEGKYRCQNQRFFDLVSPSRSAHFHPNIQGAKSSSDVKTYMEKDGDFIDYGVFQVDGRSARGGCQSANDTYAKVLNADCAATALNILREEQPRDYVLHLDKIRTHVQKLFAVAPEPWLPPFHLSSFTNVPDEMKAWADDYFGRGAAARPARPVSIIIEGDSRTGKTMWARALGPHNYLSGHLDFNSKVYSNAVEYNVIDDVSPQYLKLKHWKELIGAQRDWQSNCKYGKPVQIKGGIPSIVLCNPGEGASYKDFLEREENASLKSWTLHNAKFIFLHAPLYQSTAQSS

NCBI Accession YP_010087840.1
Location 1989-2282
Protein Name AC4
Coding Region ATGGGGAACCTCATTTACACGTGCTCATCCAGTTCGAAGGAAAATACAGATGCCAGAATCAAAGATTCTTCGACTTGGTTTCCCCATCAAGGTCAGCACATTTCCATCCGAACATTCAGGGAGCTAAATCGTCCTCAGATGTCAAGACCTATATGGAGAAAGACGGAGACTTCATTGATTATGGAGTTTTCCAGGTCGATGGACGTTCAGCTCGAGGAGGTTGCCAATCTGCCAACGATACATATGCCAAGGTTCTCAACGCAGATTGTGCAGCCACGGCCCTCAATATATTAA
Protein Sequence MGNLIYTCSSSSKENTDARIKDSSTWFPHQGQHISIRTFRELNRPQMSRPIWRKTETSLIMEFSRSMDVQLEEVANLPTIHMPRFSTQIVQPRPSIY

References More References in PubMed

1

Biological and molecular characterization of bean bushy stunt virus, a novel bipartite begomovirus infecting common bean in northwestern Argentina.

Reyna PG, et al.  Arch Virol. 2021 May;166(5):1409-1414. doi: 10.1007/s00705-021-05002-4. Epub 2021 Feb 28.

PMID: 33646405
2

Structure of tomato bushy stunt virus. V. Coat protein sequence determination and its structural implications.

Hopper P, et al.  J Mol Biol. 1984 Aug 25;177(4):701-13. doi: 10.1016/0022-2836(84)90045-7.

PMID: 6481803
3

Structure of southern bean mosaic virus at 2.8 A resolution.

Abad-Zapatero C, et al.  Nature. 1980 Jul 3;286(5768):33-9. doi: 10.1038/286033a0.

PMID: 19711553
4

Development of Bean pod mottle virus-based vectors for stable protein expression and sequence-specific virus-induced gene silencing in soybean.

Zhang C, et al.  Virology. 2006 Jan 20;344(2):401-11. doi: 10.1016/j.virol.2005.08.046. Epub 2005 Oct 14.

PMID: 16226780
5

Amino acid sequence of southern bean mosaic virus coat protein and its relation to the three-dimensional structure of the virus.

Hermodson MA, et al.  Virology. 1982 May;119(1):133-49. doi: 10.1016/0042-6822(82)90071-x.

PMID: 18635141
6

Structural comparisons of some small spherical plant viruses.

Rossmann MG, et al.  J Mol Biol. 1983 Apr 25;165(4):711-36. doi: 10.1016/s0022-2836(83)80276-9.

PMID: 6854630
7

Three-dimensional structure of baculovirus-expressed Norwalk virus capsids.

Prasad BV, et al.  J Virol. 1994 Aug;68(8):5117-25. doi: 10.1128/JVI.68.8.5117-5125.1994.

PMID: 8035511
8

Constraints on the assembly of spherical virus particles.

Rossmann MG.  Virology. 1984 Apr 15;134(1):1-11. doi: 10.1016/0042-6822(84)90267-8.

PMID: 6710869
9

Quantitative evaluation of six different viral suppressors of silencing using image analysis of transient GFP expression.

Dhillon T, et al.  Plant Cell Rep. 2009 Apr;28(4):639-47. doi: 10.1007/s00299-009-0675-5. Epub 2009 Feb 6.

PMID: 19198843
10

Evidence for participation of RNA 1-encoded elicitor in Cowpea mosaic virus-mediated concurrent protection.

Bruening G, et al.  Virology. 2000 Jan 20;266(2):299-309. doi: 10.1006/viro.1999.0099.

PMID: 10639316