Genus | Begomovirus |
---|---|
NCBI Assembly | GCF_004787035.1 |
Isolate | Peru: La Libertad, San Carlos Alto |
Release date | 2019/6/28 |
Submitter | Martinez-Ayala,A., Sanchez-Campos,S., Aragon-Caballero,L., Navas-Castillo,J., Moriones,E. |
Host | |
Download | Genome |GFF3 |PEP |CDS |
NCBI Accession | YP_009927293.1 |
---|---|
Location | 562-1188 |
Gene Name | BV1 |
Protein Name | NSP |
Coding Region | ATGCCAGTGTCAGCCCAACGGATACATGAGAACCAATATGGGCCTGAGTTTGTTATGGCCCAAAATACAGCCATATCTAGTTACATCACATATCCTACACTTGGTAAGGGTGACTCTTGTCGATCACGGAGTTATATTAAGTTAAAACGTCTGCGTTTCAAAGGTACACTAAAGATTGAACGTATTAATCCGGATGTGAATATGCAAGATTTAAGCCCGAAGATTGAAGGTGTATTTTCTATGGTAATTGTTGTTGATCGTAAACCTCATCTTGGGGCATCTGGACGTCTGCATACGTTTGATGAACTATTTGGAGCAAGGATACATAGCCATGGGAATTTGGTTGTTACTGCTGCACAGAGAGACCGTTTTTATATACGGCATGTGTTTAAGCAAGTTATGTCCGTTGAAAATGATTCTACAATGGTCGATTTGGAAGGAGTGACATATTTATCGAACAGGCGTTATAATTGCTGGTCTACATTTAAAGACGTTGATCGTGATTCATGTAATGGGGTTTATGATAATATTAGCAAAAATGCTGTGTTAGTCTATTATTGCTGGATGACGGATATTCTATCTAAGGCATCGACATTTGTATCATTTGATCTTGATTATATTGGATGA |
Protein Sequence | MPVSAQRIHENQYGPEFVMAQNTAISSYITYPTLGKGDSCRSRSYIKLKRLRFKGTLKIERINPDVNMQDLSPKIEGVFSMVIVVDRKPHLGASGRLHTFDELFGARIHSHGNLVVTAAQRDRFYIRHVFKQVMSVENDSTMVDLEGVTYLSNRRYNCWSTFKDVDRDSCNGVYDNISKNAVLVYYCWMTDILSKASTFVSFDLDYIG |
NCBI Accession | YP_009927294.1 |
---|---|
Location | 1267-2148 |
Gene Name | BC1 |
Protein Name | MP |
Coding Region | ATGGGTTCACAGCTAGATTTCCCACCAACAGCGTTTAATTATGTCGAATCTCAACGTGATGAATATCAATTATCTCACGACTTAACTGAGATTATTTTGCAGTTTCCTTCAACAGCTTCACAACTTACTGCAAGACTGAGTCGTAGCTGTATGAAAATTGACCATTGCGTCATTGAATACAGACAACAAGTACCGATTAACGCATCTGGTTCTGTAATAGTGGAGATTCATGATAAAAGAATGACTGATAATGAGTCATTGCAAGCGTCATGGACATTTCCCATAAGATGTAACATAGACCTCCACTATTTCTCTTCGTCATTCTTTTCGCTTAAAGACCCAATTCCATGGAAATTATATTATAGAGTTAGCGACACGAATGTTCATCAAAGGACACATTTTGCCAAATTCAAAGGCAAGCTGAAATTATCGACGGCTAAACATTCCGTGGATATTCCTTTCAGACCCCCAACTGTAAAAATATTGTCTAAGCAGTTTACCGAGAAAGATATAGATTTCTCGCATGTTGGGTACGGCAAATATGAAAGGAAACTCATCAGGTCCGCATCCAGTTCAAGATATGGGCTACACAGCCCAATTACAATAGCACCAGGTGAAACATGGGCAACACGAAGTACTATCGGGTCTGGTCATACAGATGCGGACTCTGATATTGAGAGCGCACTACATCCTTACAAAGAACTACACAGAATAGGTACGAGCTTATTAGACCCAGGTGACTCCGCATCAATTGTAGGTGCGCGACGAGCAGAGTCCAACATAACAATGTCTATGGCCCAGTTAAATGAATTGGTTAAGACTGCGGCCCAGGAATGTATTAAAAATAACTGTACTCCTACTGAGACCAAATCCTTGAAATAA |
Protein Sequence | MGSQLDFPPTAFNYVESQRDEYQLSHDLTEIILQFPSTASQLTARLSRSCMKIDHCVIEYRQQVPINASGSVIVEIHDKRMTDNESLQASWTFPIRCNIDLHYFSSSFFSLKDPIPWKLYYRVSDTNVHQRTHFAKFKGKLKLSTAKHSVDIPFRPPTVKILSKQFTEKDIDFSHVGYGKYERKLIRSASSSRYGLHSPITIAPGETWATRSTIGSGHTDADSDIESALHPYKELHRIGTSLLDPGDSASIVGARRAESNITMSMAQLNELVKTAAQECIKNNCTPTETKSLK |
NCBI Accession | YP_009666355.1 |
---|---|
Location | 158-907 |
Gene Name | AV1 |
Protein Name | CP |
Coding Region | ATGCCAAAGCGGGATGCCCCATGGCGTACTATGGCGGGGACCTCCAAGGTGTCTCGTAATGCCAACTATTCCCCTCGTGGTGGTCCAAAGTTTGACAAGGCCTCTGCTTGGGTGAACAGGCCCATGTATAGGAAGCCCAGGATTTACCGGACTCTACGAGGGCCCGATGTTCCAAGAGGTTGTGAAGGGCCTTGTAAGGTGCAGTCTTACGAGCAACGTCATGATATTTCCCATGTTGGTAAAGTTATGTGTATATCTGATGTCACGCGTGGTAACGGTATTACCCATCGTGTAGGTAAGCGTTTTTGTGTTAAGTCTGTGTACATTTTAGGTAAGATATGGATGGACGAGAATATCAAGTTGAAGAACCACACCAACAGCGTGATGTTCTGGTTGGTGAGAGACCGTAGACCTTATTCCACGCCTATGGACTTTGGTCAAGTATTCAACATGTTTGATAATGAACCCAGTACTGCCACGGTGAAAAATGATTTGCGTGACCGTTATCAAGTTATGCACAAGTTTTATGCTAAGGTTACTGGTGGACAATATGCAAGTAACGAACAGGCGTTGGTCAAACGTTTCTGGAAGGTTAACAACTATGTGGTCTACAACCATCAGGAAGCGGGGAAATACGAGAATCATACGGAGAATGCGTTACTATTGTATATGGCATGTACTCATGCGTCTAATCCTGTGTATGCGACATTGAAAATTCGGATCTATTTTTATGATTCGATATTAAATTAA |
Protein Sequence | MPKRDAPWRTMAGTSKVSRNANYSPRGGPKFDKASAWVNRPMYRKPRIYRTLRGPDVPRGCEGPCKVQSYEQRHDISHVGKVMCISDVTRGNGITHRVGKRFCVKSVYILGKIWMDENIKLKNHTNSVMFWLVRDRRPYSTPMDFGQVFNMFDNEPSTATVKNDLRDRYQVMHKFYAKVTGGQYASNEQALVKRFWKVNNYVVYNHQEAGKYENHTENALLLYMACTHASNPVYATLKIRIYFYDSILN |
NCBI Accession | YP_009666356.1 |
---|---|
Location | 904-1326 |
Gene Name | AC3 |
Protein Name | TrAP |
Coding Region | ATGTCCACATCAACTGCTGCAACGACGGATTTACGCACAGGGGAACTCATCACTGTGCCTCAAGCAGAGAATGGCGTATATACCTGGGAGATAGAAAATCCCCTCTATTTCAAAATAACCAACGTAGAGAAGCCTCTCTACACGAGGACAACAATATTCCACGTCCAGATACGCTTCAACCACAACCTGAGGAAAGCGTTGGATCTCCACAAGGCATTTCTCAATTTCCAAGTTTGGACGACATTGACGACAGCTTCTGGGCAGATATATTTAAGTAGATTTAAATATTTAGTATTGTCGTTTTTAGATAGAGTAGGTGTTATTGGACTCAACAATGTAATCAGAGCTGTTCGTTACGCAACAGACAGAGCATATGTAAATTATGTACTTGAGAATCATGAAATAAAATTCAAAATTTATTAA |
Protein Sequence | MSTSTAATTDLRTGELITVPQAENGVYTWEIENPLYFKITNVEKPLYTRTTIFHVQIRFNHNLRKALDLHKAFLNFQVWTTLTTASGQIYLSRFKYLVLSFLDRVGVIGLNNVIRAVRYATDRAYVNYVLENHEIKFKIY |
NCBI Accession | YP_009666357.1 |
---|---|
Location | 1049-1438 |
Gene Name | AC2 |
Protein Name | REn |
Coding Region | ATGCGAAATTCATCACTCTCAACGCCCCCTTGTATCAAAGCACAGCACACAGCAGCGAAACGTAGAGCACCTAGACGTAGACGCATCGACCTTAATTGTGGGTGTTCTATTTATGTCCACATCAACTGCTGCAACGACGGATTTACGCACAGGGGAACTCATCACTGTGCCTCAAGCAGAGAATGGCGTATATACCTGGGAGATAGAAAATCCCCTCTATTTCAAAATAACCAACGTAGAGAAGCCTCTCTACACGAGGACAACAATATTCCACGTCCAGATACGCTTCAACCACAACCTGAGGAAAGCGTTGGATCTCCACAAGGCATTTCTCAATTTCCAAGTTTGGACGACATTGACGACAGCTTCTGGGCAGATATATTTAAGTAG |
Protein Sequence | MRNSSLSTPPCIKAQHTAAKRRAPRRRRIDLNCGCSIYVHINCCNDGFTHRGTHHCASSREWRIYLGDRKSPLFQNNQRREASLHEDNNIPRPDTLQPQPEESVGSPQGISQFPSLDDIDDSFWADIFK |
NCBI Accession | YP_009666358.1 |
---|---|
Location | 1374-2435 |
Gene Name | AC1 |
Protein Name | Rep |
Coding Region | ATGCCCTTACCAAAGCGTTTTCAAGTAAGTGCGAAGAACTTCTTCCTCACATACCCTCATTGTCCATTAACCAAAGAAGAAGCTCTTGCACAGATACAGCAACTCAATACACCAACAAATAAGAAGTTCATTCGCGTTACAAGAGAACTCCATGAGGATGGGCAACCTCATCTACACGTGCTTATCCAGTTCGAAGGAAAATTCAGATGCCAAAATCCAAGATTCTTCGACTTGGTCTCCCCAACAAGGTCAGCACATTTCCATCCAAACATTCAGGGAGCTAAGAGCTCGTCAGATGTCAAGACCTACATGGAGAAAGACGGAGACTTCATTGATTTTGGAATTTTCCAAGTCGATGGAAGATCAGCTAGAGGAGGTTGCCAATCTGCCAATGATACGTACGCCAAGGTTCTCAATGCACAGTGTGCATCAACGGCACTTAATATATTAAGAGAAGAACAGCCAAGAGATTATGTTCTTCATTTAGACAAAATTAGGGGGCATATTAATAAGTTATTTCAAAAGGCTCCAGAACCTTGGGTACCTCCATTCCACCTCTCCTCGTTCAATAATGTCCCAAAAGAAATGCAAGATTGGGCTGATGATTATTTTGGGAGAGGTGCCGCTGCGCGGCCGGAAAGACCTATTAGTATCATCATCGAAGGTGATAGTCGAACAGGGAAGACAATGTGGGCGCGTGCACTAGGGCCACATAATTATTTAAGCGGACATCTCGACTTTAATTCAAATGTGTACTCAAATAATGCAGAGTACAACGTCATTGATGATGTCAGTCCGCAATATTTAAAGATGAAACATTGGAAAGAGATAATTGGGGCTCAAAAGGACTGGCAATCAAACTGCAAATACGGGAAGCCAGTTCAAATTAAAGGAGGAATTCCCGCTATCGTGCTGTGCAATCCAGGAGAGGGGGCCAGTTATAAATATTTCCTTGACAGACAGGAAAATGCATCGCTAAAATCGTGGACACTCCATAATGCGAAATTCATCACTCTCAACGCCCCCTTGTATCAAAGCACAGCACACAGCAGCGAAACGTAG |
Protein Sequence | MPLPKRFQVSAKNFFLTYPHCPLTKEEALAQIQQLNTPTNKKFIRVTRELHEDGQPHLHVLIQFEGKFRCQNPRFFDLVSPTRSAHFHPNIQGAKSSSDVKTYMEKDGDFIDFGIFQVDGRSARGGCQSANDTYAKVLNAQCASTALNILREEQPRDYVLHLDKIRGHINKLFQKAPEPWVPPFHLSSFNNVPKEMQDWADDYFGRGAAARPERPISIIIEGDSRTGKTMWARALGPHNYLSGHLDFNSNVYSNNAEYNVIDDVSPQYLKMKHWKEIIGAQKDWQSNCKYGKPVQIKGGIPAIVLCNPGEGASYKYFLDRQENASLKSWTLHNAKFITLNAPLYQSTAHSSET |
NCBI Accession | YP_009666359.1 |
---|---|
Location | 1985-2284 |
Gene Name | AC4 |
Protein Name | AC4 |
Coding Region | ATGAGGATGGGCAACCTCATCTACACGTGCTTATCCAGTTCGAAGGAAAATTCAGATGCCAAAATCCAAGATTCTTCGACTTGGTCTCCCCAACAAGGTCAGCACATTTCCATCCAAACATTCAGGGAGCTAAGAGCTCGTCAGATGTCAAGACCTACATGGAGAAAGACGGAGACTTCATTGATTTTGGAATTTTCCAAGTCGATGGAAGATCAGCTAGAGGAGGTTGCCAATCTGCCAATGATACGTACGCCAAGGTTCTCAATGCACAGTGTGCATCAACGGCACTTAATATATTAA |
Protein Sequence | MRMGNLIYTCLSSSKENSDAKIQDSSTWSPQQGQHISIQTFRELRARQMSRPTWRKTETSLILEFSKSMEDQLEEVANLPMIRTPRFSMHSVHQRHLIY |
1 |
Kamran A, et al. Plant Dis. 2018 Feb;102(2):318-326. doi: 10.1094/PDIS-03-17-0418-RE. Epub 2017 Nov 21. PMID: 30673532 |
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2 |
A Previously Undescribed Polerovirus (Solemoviridae) Infecting Theobroma cacao Germplasm. Adegbola RO, et al. Plant Dis. 2022 Aug 23. doi: 10.1094/PDIS-06-22-1449-PDN. Online ahead of print. PMID: 35997671 |
3 |
Li Y, et al. Front Microbiol. 2021 Feb 26;12:623875. doi: 10.3389/fmicb.2021.623875. eCollection 2021. PMID: 33717012 |
4 |
Muntingia yellow spot virus: a novel New World begomovirus infecting Muntingia calabura L. Romay G, et al. Arch Virol. 2021 Jun;166(6):1759-1762. doi: 10.1007/s00705-021-05039-5. Epub 2021 Mar 20. PMID: 33745066 |
5 |
First report of youcai mosaic virus in firecracker flower (Crossandra infundibuliformis) in Taiwan. Chen YK, et al. Plant Dis. 2022 May 31. doi: 10.1094/PDIS-03-22-0704-PDN. Online ahead of print. PMID: 35640947 |
6 |
Nolasco G, et al. J Virol Methods. 1993 Dec 15;45(2):201-18. doi: 10.1016/0166-0934(93)90104-y. PMID: 8113346 |