Genus | Begomovirus |
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NCBI Assembly | GCF_000879915.1 |
Isolate | China |
Release date | 2015/2/22 |
Submitter | Ding,M., Yue,N., Zhang,Z. |
Host | |
Download | Genome |GFF3 |PEP |CDS |
NCBI Accession | YP_001856211.1 |
---|---|
Location | 132-479 |
Gene Name | AV2 |
Protein Name | AV2 protein |
Coding Region | ATGTGGGATCCATTGCTTAATGAGTTCCCCGACACCGTACATGGGTTCAGGTGTATGCTTGCAATAAAATACTTGCAGCTTGTAGAAAATACGTATTCGCCGGATACGTTGGGTTACGATCTCATACGGGATCTTATCTTGGTTATACGTGCCAGGGATTATGTCGAAGCGTCCCGCCGATATAGTCATTTCCACACCCGCCTCCAAGGTGCGTCGCCGTCTGAACTTCGACAGCCCTTACACACGTCGTGCTGCTGTCCCCACTGTCCGCGTCACCAGAAGACAAATATGGACCAACAGGCCCATGTATCGAAAACCCACGATGTACCGGATGTACAGAAGCCCTGA |
Protein Sequence | MWDPLLNEFPDTVHGFRCMLAIKYLQLVENTYSPDTLGYDLIRDLILVIRARDYVEASRRYSHFHTRLQGASPSELRQPLHTSCCCPHCPRHQKTNMDQQAHVSKTHDVPDVQKP |
NCBI Accession | YP_001856212.1 |
---|---|
Location | 292-1062 |
Gene Name | AV1 |
Protein Name | coat protein |
Coding Region | ATGTCGAAGCGTCCCGCCGATATAGTCATTTCCACACCCGCCTCCAAGGTGCGTCGCCGTCTGAACTTCGACAGCCCTTACACACGTCGTGCTGCTGTCCCCACTGTCCGCGTCACCAGAAGACAAATATGGACCAACAGGCCCATGTATCGAAAACCCACGATGTACCGGATGTACAGAAGCCCTGATGTTCCAAAGGGTTGTGAAGGCCCATGTAAGGTGCAGTCCTATGAGGCCCGTCATGATGTGTCCCATACCGGTAAGGTCATATGTGTCACGGATGTTACACGTGGTAATGGTATTACGCATCGAGTTGGTAAGAGGTTTTGTGTCAAATCCATTTACGTCATTGGGAAGATATGGATGGATGAAAATATTAAATTGAAAAATCACACCAATACAGTTATGTTTTTTTTAGTTAGAGATCGGCGTCCGAGTGGTACTCCGATGGATTTTCAGCAGGTGTTTAATTGTTATGACAACGAGCCAAGCACCGGTACTGTGAAGAATGATATCAGAGACAGGTTTCAAGTGATTCGCAAGTTCAATTATATGGTTACTGGTGGGCAATATGCGTCTAAAGAACAGGCATTAGTGAAGAAATTCATGCGGGTTAATACCCATGTTGTGTATAATCATCAAGAACAGGCGAAGTATGAAAATCATACTGAGAATGCATTATTGTTGTATATGGTGTCTACTCATGCGAGTAATCCTGTATATGCGACTTTGAAAGTCCGCATCTATTTCTATGATTCACAAATGAATTAA |
Protein Sequence | MSKRPADIVISTPASKVRRRLNFDSPYTRRAAVPTVRVTRRQIWTNRPMYRKPTMYRMYRSPDVPKGCEGPCKVQSYEARHDVSHTGKVICVTDVTRGNGITHRVGKRFCVKSIYVIGKIWMDENIKLKNHTNTVMFFLVRDRRPSGTPMDFQQVFNCYDNEPSTGTVKNDIRDRFQVIRKFNYMVTGGQYASKEQALVKKFMRVNTHVVYNHQEQAKYENHTENALLLYMVSTHASNPVYATLKVRIYFYDSQMN |
NCBI Accession | YP_001856213.1 |
---|---|
Location | 1059-1463 |
Gene Name | AC3 |
Protein Name | AC3 protein |
Coding Region | ATGGATTCACGCACCGGGGAACTACTCACTGCAACTCAATCAGAGAATGGCGTGTATATCTGGACGGTCAAAAATCCCCTATATTTCAAGATAACCAAACACCACGAGAGACCATTTCTGAGGAAACACGACATCATCACATTACAAGTCCAATTCAACTACAACCTGAGGAAAGCGTTGGGGATACACAAATGTTTTCTAACCTGCCAAATCTGGACTCATTTACATCCTCAGACCTCGCGTTTCTTAAGAGTATTTAAATACCAATTTCTTAAATATTTAGATAGATTAGGCGTGATTAGCATTAACAATTGTATTAGGGCTTTTAGATATGTATTATACGATGTATTGAATGGAACAATAGATGTAATTGAAAATCATGATATAAAATTCAATATTTATTAA |
Protein Sequence | MDSRTGELLTATQSENGVYIWTVKNPLYFKITKHHERPFLRKHDIITLQVQFNYNLRKALGIHKCFLTCQIWTHLHPQTSRFLRVFKYQFLKYLDRLGVISINNCIRAFRYVLYDVLNGTIDVIENHDIKFNIY |
NCBI Accession | YP_001856214.1 |
---|---|
Location | 1204-1608 |
Gene Name | AC2 |
Protein Name | AC2 protein |
Coding Region | ATGCACAATTCGTCACCCTCAACGGGCCACTCTACTCAGGTTCCTATCAAGGTGCAACACAGAATTGCCAAGAAGACAACCAGACGACGACGAGTTGATCTACCTTGTGGCTGTTCATACTTCGTTGCTTTAGGCTGTCACAATCATGGATTCACGCACCGGGGAACTACTCACTGCAACTCAATCAGAGAATGGCGTGTATATCTGGACGGTCAAAAATCCCCTATATTTCAAGATAACCAAACACCACGAGAGACCATTTCTGAGGAAACACGACATCATCACATTACAAGTCCAATTCAACTACAACCTGAGGAAAGCGTTGGGGATACACAAATGTTTTCTAACCTGCCAAATCTGGACTCATTTACATCCTCAGACCTCGCGTTTCTTAAGAGTATTTAA |
Protein Sequence | MHNSSPSTGHSTQVPIKVQHRIAKKTTRRRRVDLPCGCSYFVALGCHNHGFTHRGTTHCNSIREWRVYLDGQKSPIFQDNQTPRETISEETRHHHITSPIQLQPEESVGDTQMFSNLPNLDSFTSSDLAFLKSI |
NCBI Accession | YP_001856215.1 |
---|---|
Location | 1511-2596 |
Gene Name | AC1 |
Protein Name | Rep protein |
Coding Region | ATGGCTCCTCCTAAACGTTTCCAAATATATGCTAAAAACTATTTCATCACTTATCCCAAGTGTTCTCTCTCCAAAGAAGACGCACTTTCCCAATTACAAAACCTAGTCACCCCAACTAACAAGAAATATATCAGAATCTGCAGAGAGCTTCACGACGATGGGTCTCCTCATCTCCACGTGCTTATCCAATTCGAAGGAAAATACAAATGCCAGAATAACAGATTCTTCGACCTGGTATCCCCAACCAGGTCAGCACATTTCCATCCAAACATTCAGGGAGCTAAATCCAGCTCCGACGTCAAGTCCTATATCAAGAAAGACGGAGACATCATCGATTGGGGAGAGTTTCAAATCGATGCAAGATCTGCAAGAGGGGGACAGCAATCAGCCAACGACGCTTACGCCAAGGCGCTTAACAGCAGCAGTAAGTCAGAGGCTCTTAATGTAATTAAAGAATTAGCCCCCAAGGATTATGTATTACAATTTCATAATTTAAATTCCAATTTAGATAGGATTTTTGCACCTCCATTAGAGATTTTTAGTTGTCCTTTTTTATCTTCATCGTTTGATCAAGTTCCAGAAGAACTTGAAGAATGGGTTTCCGATAATGTAAGGGATGCCGCTGCGCGGCCTTTAAGACCGATAAGTATAGTCATAGAGGGTGATAGTAGAACGGGGAAGACTATGTGGGCCAGGTCATTAGGACTACATAATTATCTGTGCGGACATTTGGATCTCAGTCCAAAGGTATACAGGAATGATGCATGGTATAACGTCATTGATGACGTCGATCCCCACTACCTAAAGCACTTTAAGGAATTCATGGGGGCCCAAAGGGACTGGCAAAGCAACACAAAGTACGGGAAGCCAATTCAAATTAAAGGTGGAATTCCAACTATCTTCCTTTGCAATCCAGGACCCAATTCCAGCTATAAAGAGTATCTAGAAGAGGAAAAGAATTCCGCACTCAAAGATTGGGCTTTAAAAAATGCACAATTCGTCACCCTCAACGGGCCACTCTACTCAGGTTCCTATCAAGGTGCAACACAGAATTGCCAAGAAGACAACCAGACGACGACGAGTTGA |
Protein Sequence | MAPPKRFQIYAKNYFITYPKCSLSKEDALSQLQNLVTPTNKKYIRICRELHDDGSPHLHVLIQFEGKYKCQNNRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYIKKDGDIIDWGEFQIDARSARGGQQSANDAYAKALNSSSKSEALNVIKELAPKDYVLQFHNLNSNLDRIFAPPLEIFSCPFLSSSFDQVPEELEEWVSDNVRDAAARPLRPISIVIEGDSRTGKTMWARSLGLHNYLCGHLDLSPKVYRNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQSNTKYGKPIQIKGGIPTIFLCNPGPNSSYKEYLEEEKNSALKDWALKNAQFVTLNGPLYSGSYQGATQNCQEDNQTTTS |
NCBI Accession | YP_001856216.1 |
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Location | 2149-2439 |
Gene Name | AC4 |
Protein Name | AC4 protein |
Coding Region | ATGGGTCTCCTCATCTCCACGTGCTTATCCAATTCGAAGGAAAATACAAATGCCAGAATAACAGATTCTTCGACCTGGTATCCCCAACCAGGTCAGCACATTTCCATCCAAACATTCAGGGAGCTAAATCCAGCTCCGACGTCAAGTCCTATATCAAGAAAGACGGAGACATCATCGATTGGGGAGAGTTTCAAATCGATGCAAGATCTGCAAGAGGGGGACAGCAATCAGCCAACGACGCTTACGCCAAGGCGCTTAACAGCAGCAGTAAGTCAGAGGCTCTTAATGTAA |
Protein Sequence | MGLLISTCLSNSKENTNARITDSSTWYPQPGQHISIQTFRELNPAPTSSPISRKTETSSIGESFKSMQDLQEGDSNQPTTLTPRRLTAAVSQRLLM |
1 |
Xie Y, et al. Arch Virol. 2003 Oct;148(10):2047-54. doi: 10.1007/s00705-003-0153-2. PMID: 14551824 |
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2 |
Identification of a novel pepper-infecting monopartite begomovirus in China. Li P, et al. Arch Virol. 2021 Jun;166(6):1751-1754. doi: 10.1007/s00705-021-04989-0. Epub 2021 Mar 20. PMID: 33743050 |
3 |
Seepiban C, et al. Virol J. 2017 May 30;14(1):99. doi: 10.1186/s12985-017-0763-z. PMID: 28558726 |
4 |
Incidence and Molecular Identification of Begomoviruses Infecting Tomato and Pepper in Myanmar. Kwak HR, et al. Plants (Basel). 2022 Apr 10;11(8):1031. doi: 10.3390/plants11081031. PMID: 35448759 |
5 |
First Report of Tobacco curly shoot virus Infecting Pepper in China. Qing L, et al. Plant Dis. 2010 May;94(5):637. doi: 10.1094/PDIS-94-5-0637A. PMID: 30754455 |