Genus | Begomovirus |
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NCBI Assembly | GCF_000839505.1 |
Release date | 2015/2/12 |
Submitter | Torres-Pacheco,I., Garzon-Tiznado,J.A., Herrera-Estrella,L., Rivera-Bustamante,R.F., Rivera-Bustamante,R. |
Download | Genome |GFF3 |PEP |CDS |
NCBI Accession | NP_040320.1 |
---|---|
Location | 230-985 |
Gene Name | AR1 |
Protein Name | hypothetical protein |
Coding Region | ATGCCTAAGCGTGATGCTCCTTGGCGATTAACGGCGGGGACCGCCAAGATTAGCCGAACTGGCAATAATTCACGGGCTCTTATCATGGGCCCGAGTACTAGCAGGGCCTCAGCTTGGGTTAATCGCCCAATGTACAGGAAGCCCCGGATTTATCGTATGTACAGAACTCCGGATGTGCCGAAAGGTTGTGAAGGTCCCTGTAAGGTTCAATCGTTTGAACAACGACATGACGTCTCTCATGTTGGTAAGGTTATTTGTATATCCGACGTAACTCGTGGTAATGGTATTACCCATCGTGTTGGCAAACGATTCTGCGTTAAGTCTGTCTATATTCTGGGCAAAATCTGGATGGATGAAAATATTAAGTTGAAGAACCATACCAACAGTGTCATGTTTTGGTTGGTTAGGGATAGGAGACCCTACGGTACGCCTATGGATTTTGGCCAAGTCTTTAACATGTATGACAACGAGCCCAGTACCGCTACTGTGAAGAACGATCTTCGGGATCGTTATCAAGTTATGCATAGATTCTATGCTAAGGTCACTGGTGGGCAATATGCAAGCAACGAGCAAGCCTTGGTTAGGCGTTTCTGGAAGGTGAACAACCATGTTGTGTATAACCATCAAGAAGCTGGGAAATATGAGAACCACACGGAGAATGCGCTGTTATTGTATATGGCATGTACTCATGCATCTAATCCCGTGTATGCAACACTCAAAATTCGGGTCTATTTTTATGACTCGATAATGAATTAA |
Protein Sequence | MPKRDAPWRLTAGTAKISRTGNNSRALIMGPSTSRASAWVNRPMYRKPRIYRMYRTPDVPKGCEGPCKVQSFEQRHDVSHVGKVICISDVTRGNGITHRVGKRFCVKSVYILGKIWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMYDNEPSTATVKNDLRDRYQVMHRFYAKVTGGQYASNEQALVRRFWKVNNHVVYNHQEAGKYENHTENALLLYMACTHASNPVYATLKIRVYFYDSIMN |
NCBI Accession | NP_040321.1 |
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Location | 338-853 |
Gene Name | AL4 |
Protein Name | hypothetical protein |
Coding Region | ATGGTTATACACAACATGGTTGTTCACCTTCCAGAAACGCCTAACCAAGGCTTGCTCGTTGCTTGCATATTGCCCACCAGTGACCTTAGCATAGAATCTATGCATAACTTGATAACGATCCCGAAGATCGTTCTTCACAGTAGCGGTACTGGGCTCGTTGTCATACATGTTAAAGACTTGGCCAAAATCCATAGGCGTACCGTAGGGTCTCCTATCCCTAACCAACCAAAACATGACACTGTTGGTATGGTTCTTCAACTTAATATTTTCATCCATCCAGATTTTGCCCAGAATATAGACAGACTTAACGCAGAATCGTTTGCCAACACGATGGGTAATACCATTACCACGAGTTACGTCGGATATACAAATAACCTTACCAACATGAGAGACGTCATGTCGTTGTTCAAACGATTGAACCTTACAGGGACCTTCACAACCTTTCGGCACATCCGGAGTTCTGTACATACGATAAATCCGGGGCTTCCTGTACATTGGGCGATTAACCCAAGCTGA |
Protein Sequence | MVIHNMVVHLPETPNQGLLVACILPTSDLSIESMHNLITIPKIVLHSSGTGLVVIHVKDLAKIHRRTVGSPIPNQPKHDTVGMVLQLNIFIHPDFAQNIDRLNAESFANTMGNTITTSYVGYTNNLTNMRDVMSLFKRLNLTGTFTTFRHIRSSVHTINPGLPVHWAINPS |
NCBI Accession | NP_040322.1 |
---|---|
Location | 982-1380 |
Gene Name | AL3 |
Protein Name | hypothetical protein |
Coding Region | ATGGATTTACGCACCGGGGTACCCATCACTGCAGCTCAAGCAGCGAATGGCGTTTTTATCTGGGAGCTTCGAAATCCCCTATATTTCAAAATACGGCTAGTGGAGACGCCAATGTACACACGCAGCCGGGTATTTCACATTCAAGTCAGAGCAAACCACAACATGAGGACAGCGTTGGGTCTCCACAAAGCCTACTTCAACTTCCAAGTCTGGACGACGTTGACGACGATTTCTGGGCAGATTTACTTAAATAGATTTAAATTGCTTGTCATGTTTTATCTAGATAACTTAGGTCTTATTTCAGTTAACAATGTAATTAGGGCTGTTTCGTTTGCTACAGACAAACGTTATGTCAATGCTGTACTTGAGAATCATGAAATAATATACAAACTTTATTAA |
Protein Sequence | MDLRTGVPITAAQAANGVFIWELRNPLYFKIRLVETPMYTRSRVFHIQVRANHNMRTALGLHKAYFNFQVWTTLTTISGQIYLNRFKLLVMFYLDNLGLISVNNVIRAVSFATDKRYVNAVLENHEIIYKLY |
NCBI Accession | NP_040323.1 |
---|---|
Location | 1127-1543 |
Gene Name | AL2 |
Protein Name | hypothetical protein |
Coding Region | ATGACTGGGTCCAAAAAAACGCCATCTACGTCACCATCGAAGAAGCTATCTTCACCACCGGAAGTCAAACTTCGCCATAGATTTGCAAAGAGACAGATACGACGTAGAAGGATTGATCTCGCTTGCGGCTGTTCAATTTATATACATATTAACTGTGTTAACAATGGATTTACGCACCGGGGTACCCATCACTGCAGCTCAAGCAGCGAATGGCGTTTTTATCTGGGAGCTTCGAAATCCCCTATATTTCAAAATACGGCTAGTGGAGACGCCAATGTACACACGCAGCCGGGTATTTCACATTCAAGTCAGAGCAAACCACAACATGAGGACAGCGTTGGGTCTCCACAAAGCCTACTTCAACTTCCAAGTCTGGACGACGTTGACGACGATTTCTGGGCAGATTTACTTAAATAG |
Protein Sequence | MTGSKKTPSTSPSKKLSSPPEVKLRHRFAKRQIRRRRIDLACGCSIYIHINCVNNGFTHRGTHHCSSSSEWRFYLGASKSPIFQNTASGDANVHTQPGISHSSQSKPQHEDSVGSPQSLLQLPSLDDVDDDFWADLLK |
NCBI Accession | NP_040324.1 |
---|---|
Location | 1464-2513 |
Gene Name | AL1 |
Protein Name | hypothetical protein |
Coding Region | ATGCCATTACCTAAACGATTTCGTTTAAATGCCAAGAATTATTTCCTCACCTATCCACAATGTTCCATTTCCAAAGAAGAGCGTCTCGCTCAACTACAAAACCTCTCGACGCCGGTAAACAAGAAGTACATCAAAATTTGCAAAGAATCTCATGAAGATGGGCAACCTCATCTGCACGTGCTTATTCAGTTCGAAGGAAAATACCAATGCACGAACAACCGATTCTTTGACCTCGTATCCTCTACCAGATCAGCACATTTCCATCCGAACATTCAGGGAGCTAAATCAAGCTCCGACGTCAAGACGTACATCGACAAAGACGGCGATACCGTAGAATGGGGAGAATTCCAAATAGACGGCAGATCTGCTAGAGGAGGACAGCAGTCTGCTAATGACACATATGCTAAGGCGTTAAATTCAGCATCTGCAGAAGAAGCTCTGCAGATCATAAAGGAAGAACAACCTCAGCATTTCTTCCTCCAATTTCATAACATTGTGTCAAACGCTAATCGGATATTCCAAACTCCCCCGGAACCGTGGGTTCCTCCATTTCAACAGGCGTCCTTTAATAATGTGCCTGCAATAATGACACAATGGGTGTCTGATAATGTATGTGATGCCGCTGCGCGGCCAATGAGACCATTGTCATTAGTGGTCGAGGGTCCTTCACGGACAGGCAAAACATTATGGGCCCGAAGTCTCGGCCCACACAATTACATATGTGGTCATATGGATCTCAGCCCAAAAATCTACTCCAATAATGCATGGTATAACGTCATTGATGACATCCCTCCGCATTATGTTAAGCACTTTAAAGAGTTTATGGGGGCCCAACGGGATTGGCAATCAAACTGCAAATACGGCAAACCAATTCAAATTAAAGGTGGGATACCCACTATCTTTCTTTGCAATCCGGGCCCCCAGTCTTCCTATAAAGACTACCTCAGCGAAGAGAAAAATAGGAGCCTCAATGACTGGGTCCAAAAAAACGCCATCTACGTCACCATCGAAGAAGCTATCTTCACCACCGGAAGTCAAACTTCGCCATAG |
Protein Sequence | MPLPKRFRLNAKNYFLTYPQCSISKEERLAQLQNLSTPVNKKYIKICKESHEDGQPHLHVLIQFEGKYQCTNNRFFDLVSSTRSAHFHPNIQGAKSSSDVKTYIDKDGDTVEWGEFQIDGRSARGGQQSANDTYAKALNSASAEEALQIIKEEQPQHFFLQFHNIVSNANRIFQTPPEPWVPPFQQASFNNVPAIMTQWVSDNVCDAAARPMRPLSLVVEGPSRTGKTLWARSLGPHNYICGHMDLSPKIYSNNAWYNVIDDIPPHYVKHFKEFMGAQRDWQSNCKYGKPIQIKGGIPTIFLCNPGPQSSYKDYLSEEKNRSLNDWVQKNAIYVTIEEAIFTTGSQTSP |
NCBI Accession | NP_040354.1 |
---|---|
Location | 447-1217 |
Gene Name | BR1 |
Protein Name | BR1 protein |
Coding Region | ATGTATTCTACTAGATTTAGACGTGGGTTATCCTATGTTCCACGGCGTTATAATCCACGTAATTATGGTTTTAAACGTACATTCGTCGTTAAACGTGGTGATGCTAAACGACGTCAGACTCAAGTGAAGAAACTAACAGAAGATGTTAAAATGTCATCACAACGCATCCATGAAAATCAATATGGTCCAGAATTTGTCATGGCGCATAATACAGCAATATCTACATTCATCAATTATCCCCAACTGTGTAAGACTCAGCCCAATCGTAGTAGGTCATATATTAAGTTAAAATCGTTACATTTTAAGGGAACCTTAAAGATCGAACGTGTTGGGTCTGAGGTAAATATGGCTGGGTTAAATCCGAAGATTGAGGGTGTGTTTACTGTGGTTTTAGTTGTTGACCGTAAGCCACATTTGAATCCTACTGGTAACTTGCTACAGTTTGACGAGTTATTTGGTGCAAGAATTCACAGTCTAGGGAACTTAGCCGTTACCCCGGCGTTGAAAGAACGGTTCTACATACTGCATGTGTTGAAGCGAGTTATCTCCGTTGAGAAGGATAGTATGATGCTGGACCTAGAAGGATCCACTTGTCTCTCTAGTCGGCGTTATAATTGTTGGTCTACATTTAAGGACCTTGATCCTTCGTCATGTAACGGCGTCTATGATAATATAAGCAAAAACGCCATATTAGTTTATTATTGTTGGATGTCGGATGCTATGTCTAAGGCATCCACATTTGTATCATTTGATTTGGACTATTTTGGTTAA |
Protein Sequence | MYSTRFRRGLSYVPRRYNPRNYGFKRTFVVKRGDAKRRQTQVKKLTEDVKMSSQRIHENQYGPEFVMAHNTAISTFINYPQLCKTQPNRSRSYIKLKSLHFKGTLKIERVGSEVNMAGLNPKIEGVFTVVLVVDRKPHLNPTGNLLQFDELFGARIHSLGNLAVTPALKERFYILHVLKRVISVEKDSMMLDLEGSTCLSSRRYNCWSTFKDLDPSSCNGVYDNISKNAILVYYCWMSDAMSKASTFVSFDLDYFG |
NCBI Accession | NP_597687.1 |
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Location | 1277-2158 |
Gene Name | BL1 |
Protein Name | BL1 protein |
Coding Region | ATGGATTCATGGTTGGCGAATCCTCCTAGCGCATTCAATTATATAGAGTCACATAGAGATGAATATCAGCTCTCTCATGACTTAACGGAGATAATACTTCAATTTCCGTCAACGGCGTCGCAGTACGCTGCCAGACTTAGTCGTAGCTGTATGAAAATTGACCATTGCGTTATCGAGTATAGACAGCAAGTTCCGATAAACGCCACTGGGTCGGTCATAGTGGAAATCCATGACAAACGAATGACAGACAATGAATCATTACAAGCTTCTTGGACATTTCCACTAAGATGTAACATCGATCTCCATTATTTCTCAGCATCCTTCTTCTCCTTGAAGGACCCCATACCCTGGAAGCTATATTACAGAGTCTCCGATACTAACGTACATCAGAACACCCATTTTGCCAAGTTCAAAGGGAAATTGAAGTTGTCCACAGCTAAACACTCCGTGGATATACCTTTCCGGGCTCCGACGGTGAAGATTTTATCGAAACAGTTCACCCATAACGATGTGGACTTTACACATGTGGACTACGGCAGGTGGGAGAGAAAACCATTGAGGTCAGCATCCATGTCAAGGTTCGGCATTACAGGCCCAATTGAATTAAAACCAGGTGAATCCTGGGCTTGTAGAAGCACCATAGGAACCACTCACACAGATGCTGACAACCAAGGACATAGCGCATTACATCCGTATAAAGATCTTCATCAGTTAGGCGGAAGTGTTTTGGACCCAGGTGATTCAGCATCACAAGTGGGTCTAACACGCTCTCAATCAAATATAACTATGTCCTTGGCCCAGTTGAATGAGCTTGTAAGGACTACGGTCCATGAATGTATTAACAGTAATTGTAATCCGACACAACCGAAGTCGCTAAGATAA |
Protein Sequence | MDSWLANPPSAFNYIESHRDEYQLSHDLTEIILQFPSTASQYAARLSRSCMKIDHCVIEYRQQVPINATGSVIVEIHDKRMTDNESLQASWTFPLRCNIDLHYFSASFFSLKDPIPWKLYYRVSDTNVHQNTHFAKFKGKLKLSTAKHSVDIPFRAPTVKILSKQFTHNDVDFTHVDYGRWERKPLRSASMSRFGITGPIELKPGESWACRSTIGTTHTDADNQGHSALHPYKDLHQLGGSVLDPGDSASQVGLTRSQSNITMSLAQLNELVRTTVHECINSNCNPTQPKSLR |
1 |
Rivero-Montejo SJ, et al. Plant Physiol Biochem. 2023 Oct;203:108074. doi: 10.1016/j.plaphy.2023.108074. Epub 2023 Oct 8. PMID: 37832367 |
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2 |
Early and late gene expression in pepper huasteco yellow vein virus. Shimada-Beltrán H, et al. J Gen Virol. 2007 Nov;88(Pt 11):3145-3153. doi: 10.1099/vir.0.83003-0. PMID: 17947542 |
3 |
Superinfection by PHYVV Alters the Recovery Process in PepGMV-Infected Pepper Plants. Rodríguez-Gandarilla MG, et al. Viruses. 2020 Mar 5;12(3):286. doi: 10.3390/v12030286. PMID: 32151060 |
4 |
Nava A, et al. Arch Virol. 2013 Feb;158(2):399-406. doi: 10.1007/s00705-012-1501-x. Epub 2012 Oct 14. PMID: 23064695 |
5 |
Rodelo-Urrego M, et al. Virus Evol. 2015 Jun 1;1(1):vev004. doi: 10.1093/ve/vev004. eCollection 2015. PMID: 27774278 |
6 |
Bañuelos-Hernández B, et al. Arch Virol. 2012 Sep;157(9):1835-41. doi: 10.1007/s00705-012-1358-z. Epub 2012 Jun 10. PMID: 22684489 |
7 |
Chatterji A, et al. J Biol Chem. 2001 Jul 6;276(27):25631-8. doi: 10.1074/jbc.M100030200. Epub 2001 May 7. PMID: 11342533 |
8 |
Mendoza-Figueroa JS, et al. Pestic Biochem Physiol. 2018 Feb;145:56-65. doi: 10.1016/j.pestbp.2018.01.005. Epub 2018 Feb 4. PMID: 29482732 |
9 |
Carrillo-Tripp J, et al. Phytopathology. 2007 Jan;97(1):51-9. doi: 10.1094/PHYTO-97-0051. PMID: 18942936 |
10 |
A New Begomovirus Causes Tomato Leaf Curl Disease in Baja California Sur, Mexico. Holguín-Peña RJ, et al. Plant Dis. 2005 Mar;89(3):341. doi: 10.1094/PD-89-0341A. PMID: 30795368 |