Beet curly top Iran virus
Basic Information
| Genus | Becurtovirus |
|---|---|
| NCBI Assembly | GCF_000879795.1 |
| Isolate | Iran: Kerman |
| Release date | 2015/2/22 |
| Submitter | Yazdi,H.R., Heydarnejad,J., Massumi,H., Bolok Yazdi,H.R., Hosseini Abhari,E. |
| Host | |
| Download | Genome |GFF3 |PEP |CDS |
Genomic Organization
JBrowse
Genome
NC_010417
Gene Information
| NCBI Accession | YP_001715617.1 |
|---|---|
| Location | 168-437 |
| Gene Name | V3 |
| Protein Name | movement protein |
| Coding Region | ATGATGGTCTGTATTCCCGACTGGTTATTTCTACTTTTCGTATTTAGTACGATTCTTCAGTCGGGAATTAATTTCTATGGTACCTTTCAGAGTGAGCGAATTTCCGCGAAGCTATCCAGCCTTGCTAGCCGTTTCGACGAGCTGTTTCTTGCGTTACAACAAGTGGTGTTTGCTCGGAATCGAGTCTCAAGTTCGCGAGCCGTTGACTCTAGAGGAAGGCGAGGACTTTCTTCAATTCCAGAAGGAAGTGAAGAAATTGCTGAAGCTTAA |
| Protein Sequence | MMVCIPDWLFLLFVFSTILQSGINFYGTFQSERISAKLSSLASRFDELFLALQQVVFARNRVSSSRAVDSRGRRGLSSIPEGSEEIAEA |
| NCBI Accession | YP_001715618.1 |
|---|---|
| Location | 244-609 |
| Gene Name | V2 |
| Protein Name | ss-ds DNA regulator |
| Coding Region | ATGGTACCTTTCAGAGTGAGCGAATTTCCGCGAAGCTATCCAGCCTTGCTAGCCGTTTCGACGAGCTGTTTCTTGCGTTACAACAAGTGGTGTTTGCTCGGAATCGAGTCTCAAGTTCGCGAGCCGTTGACTCTAGAGGAAGGCGAGGACTTTCTTCAATTCCAGAAGGAAGTGAAGAAATTGCTGAAGCTTAAGGTTAGTTTTAAGCGTAAGTGTTGTTTGTACGAGGACATATACAAGAAGTATGGCGGTTCAGAGTCAAAAGAGAAAGTATACTCCTCCGGCCAGTTGGACGAGGAAGAGGAAGACGACCGGTGGGAGGACAGTTTGGAAGAAATACCAATGGAAGAGACCGGTGCGAAGTAA |
| Protein Sequence | MVPFRVSEFPRSYPALLAVSTSCFLRYNKWCLLGIESQVREPLTLEEGEDFLQFQKEVKKLLKLKVSFKRKCCLYEDIYKKYGGSESKEKVYSSGQLDEEEEDDRWEDSLEEIPMEETGAK |
| NCBI Accession | YP_001715619.1 |
|---|---|
| Location | 488-1240 |
| Gene Name | V1 |
| Protein Name | coat protein |
| Coding Region | ATGGCGGTTCAGAGTCAAAAGAGAAAGTATACTCCTCCGGCCAGTTGGACGAGGAAGAGGAAGACGACCGGTGGGAGGACAGTTTGGAAGAAATACCAATGGAAGAGACCGGTGCGAAGTAACCGGGCTGTGAAGTTGAAGATGTATGACGACATGTTAGGTGCATCTGGAGTTGGATCTACCATCAGTAATGATGGGATGATCACTATGTTGAACAACTATGTTCAAGGAATTGGTGATAGCCAGAGGTCAAACAACTTGACCGTTACGAGGCATTTGAAGTTTGATATGTCTCTTATGGCTAGTGGTGCATTTTGGGCGAGTCCTAACTATATGACTCAATATCATTGGGTTATTGTGGATCGTGATGTTGGTTCTACGTTTCCGACTCAGTTGAGTACTATCTTTGATATTCCGACTGGTGGTCAGGCTATGCCTTCCACCTATCGGATTAGGAGGGATGCGAATGAACGATTTATCGTGAAGAAGAAGTGGCAGACTCATCTGATGTCTACTGGTACTGATTATGGAGGAAAGCAGACCTATAAGGCGCCTTCAATGCCTAATTATAAGAAGGCTATGAACATTAATATTCGGAATATCAATGTCAAGACATTGTGGAAGGACACTGGAGGTGGCAAATATGAAGATGTGAAGGAGAATGCTATTCTTTACGTAGTGGTTAATGATAATACTGATAATACAAATATGTATGCTACTTTGTTTGGTAATTGTAGGGCTTATTTCTATTGA |
| Protein Sequence | MAVQSQKRKYTPPASWTRKRKTTGGRTVWKKYQWKRPVRSNRAVKLKMYDDMLGASGVGSTISNDGMITMLNNYVQGIGDSQRSNNLTVTRHLKFDMSLMASGAFWASPNYMTQYHWVIVDRDVGSTFPTQLSTIFDIPTGGQAMPSTYRIRRDANERFIVKKKWQTHLMSTGTDYGGKQTYKAPSMPNYKKAMNINIRNINVKTLWKDTGGGKYEDVKENAILYVVVNDNTDNTNMYATLFGNCRAYFY |
| NCBI Accession | YP_001715620.1 |
|---|---|
| Location | 1486-1791 |
| Gene Name | C2 |
| Protein Name | hypothetical Rep protein |
| Coding Region | ATGTCTGGCATGGTATTAGATTGGTCTCTATACGATATAGACCACACTACATACCATATAATAGACGATATCCGCTATCAAAAAATACAACAGGAGTTGTTTAAATCTATTATCGGATGTAACGAAGATTATAGTGTTTGGATAAAACATAAACCAAACTTAGTCATTCAAGGCGGAAGACCTTGTATTGCTATTACTAATCCAGATATGGACTGGATACCTTGTATGAGTGAATCTATGAAAGATTGGTTTTACGCTAATTGCGATGTATATTACTTAGCAAGTGATGAAGTTTGGTATAGTTAA |
| Protein Sequence | MSGMVLDWSLYDIDHTTYHIIDDIRYQKIQQELFKSIIGCNEDYSVWIKHKPNLVIQGGRPCIAITNPDMDWIPCMSESMKDWFYANCDVYYLASDEVWYS |
| NCBI Accession | YP_001715621.1 |
|---|---|
| Location | 1806-2714 |
| Gene Name | C1 |
| Protein Name | hypothetical RepA protein |
| Coding Region | ATGCCACGTGCTCCAAACAGAAACAGACCTACCCCTAACCAACCCGGTTATTTACGTTTTCAAAAGAAAAATGCTTTTCTCACATATTCCCAAATAGGTGGGGATTTTAAAGATTATATATTCGAGAAACTGAAGACCTTATTAGAATCATATGTGATTCTATCCCTTGCAGTATCACTAGAACATCATCAGCCTACTGAAGAACAACCTGAAGGAGGATTCCACACACACTGTATTATCCAGTGTGACAAGAAACTCGACGTCAATGGGAACCTGTTTTTCAACATCATACTCCCAGACGGTCGAACGATTCACCCAAGAATCGACGGACTCAACGCCCCAAAGCGAGCATTCGAGTATATCACCAAGGAGGACACGAGCCCTAGAACATTTGGAGAGCTTCGACTGGGAGGGCGCTCTCCAAACAGTATTGGCAACAGCAACGTGGAATGGAGACGAATTCTTGATTCATCCAACACCAAGGAGGAGTTCTTCAGTAACATACGAGAGTCCTGCCCAACAGATTTCGTTCTCAGATGGCCTTCCATTCTATCCTTCGCCAACAATCATTTCAGGCCAGTTGTGCAACCTTACACACCCAGATGGACGGAGTTCTCTAGGCTACCTGACACAATCAAAGAGTGGGCGGAACAAAATATATATTTCGTAAGTTCAGATTGTTTACATTACGAAATATGTGAGAATTGCAGGGGAGCAATTCTTCAAGACAGACAAATGACTCTTGAAGAATACTTCCACCTAGATCGACTTAGTGGCGATCTAGCATGTAGTGAAGACACTAACGTACTTAATTTGTCCAGGAGCCAGACAACAGACCAGTCCGACCAAGAAGTCTCTACATATGCGGACCCTCCAGAACAGGAAAGACCCAGTGGGCAAGATCTCTAG |
| Protein Sequence | MPRAPNRNRPTPNQPGYLRFQKKNAFLTYSQIGGDFKDYIFEKLKTLLESYVILSLAVSLEHHQPTEEQPEGGFHTHCIIQCDKKLDVNGNLFFNIILPDGRTIHPRIDGLNAPKRAFEYITKEDTSPRTFGELRLGGRSPNSIGNSNVEWRRILDSSNTKEEFFSNIRESCPTDFVLRWPSILSFANNHFRPVVQPYTPRWTEFSRLPDTIKEWAEQNIYFVSSDCLHYEICENCRGAILQDRQMTLEEYFHLDRLSGDLACSEDTNVLNLSRSQTTDQSDQEVSTYADPPEQERPSGQDL |
References More References in PubMed
| 1 |
Functional Analysis of V2 Protein of Beet Curly Top Iran Virus. Bahari A, et al. Plants (Basel). 2022 Dec 2;11(23):3351. doi: 10.3390/plants11233351. PMID: 36501393 |
|---|---|
| 2 |
Yıldırım K, et al. J Virol Methods. 2022 Feb;300:114380. doi: 10.1016/j.jviromet.2021.114380. Epub 2021 Nov 24. PMID: 34838538 |
| 3 |
Ebrahimi S, et al. Viruses. 2023 Sep 26;15(10):1996. doi: 10.3390/v15101996. PMID: 37896771 |
| 4 |
Diversity of beet curly top Iran virus isolated from different hosts in Iran. Gharouni Kardani S, et al. Virus Genes. 2013 Jun;46(3):571-5. doi: 10.1007/s11262-013-0875-5. Epub 2013 Jan 18. PMID: 23329008 |
| 5 |
Yıldırım K, et al. Int J Mol Sci. 2023 Mar 30;24(7):6515. doi: 10.3390/ijms24076515. PMID: 37047489 |
| 6 |
Eini O, et al. N Biotechnol. 2022 Mar 25;67:1-11. doi: 10.1016/j.nbt.2021.12.002. Epub 2021 Dec 8. PMID: 34896246 |
| 7 |
Anabestani A, et al. Viruses. 2017 Oct 16;9(10):299. doi: 10.3390/v9100299. PMID: 29035342 |
| 8 |
Splicing features in the expression of the complementary-sense genes of Beet curly top Iran virus. Bozorgi N, et al. Virus Genes. 2017 Apr;53(2):323-327. doi: 10.1007/s11262-016-1422-y. Epub 2016 Dec 21. PMID: 28004232 |
| 9 |
Turnip curly top virus, a highly divergent geminivirus infecting turnip in Iran. Briddon RW, et al. Virus Res. 2010 Sep;152(1-2):169-75. doi: 10.1016/j.virusres.2010.05.016. Epub 2010 Jun 8. PMID: 20566344 |
| 10 |
Ebrahimi S, et al. Virus Genes. 2022 Dec;58(6):550-559. doi: 10.1007/s11262-022-01927-3. Epub 2022 Aug 12. PMID: 35960462 |