Beet curly top Iran virus
Basic Information
| Genus |
Becurtovirus
|
| NCBI Assembly |
GCF_000879795.1 |
| Isolate |
Iran: Kerman |
| Release date |
2015/2/22 |
| Submitter |
Yazdi,H.R., Heydarnejad,J., Massumi,H., Bolok Yazdi,H.R., Hosseini Abhari,E. |
| Host |
|
| Download |
Genome
|GFF3
|PEP
|CDS |
Genomic Organization
JBrowse
Genome
CCCCGCGTTTACCTTTCCACGTGGCGTATGCTGAGTGGGCGGACGGTTGAGTGGGGAACACGCTTTACTTTAAATTAAAGTAAAGTAGCACTAAGTGGGACCCACTTTTTTTATTTCTTTAAAGACTTTCTTTTTAAGTCTTCTAGATGCGTATATTATACGTATAAATGATGGTCTGTATTCCCGACTGGTTATTTCTACTTTTCGTATTTAGTACGATTCTTCAGTCGGGAATTAATTTCTATGGTACCTTTCAGAGTGAGCGAATTTCCGCGAAGCTATCCAGCCTTGCTAGCCGTTTCGACGAGCTGTTTCTTGCGTTACAACAAGTGGTGTTTGCTCGGAATCGAGTCTCAAGTTCGCGAGCCGTTGACTCTAGAGGAAGGCGAGGACTTTCTTCAATTCCAGAAGGAAGTGAAGAAATTGCTGAAGCTTAAGGTTAGTTTTAAGCGTAAGTGTTGTTTGTACGAGGACATATACAAGAAGTATGGCGGTTCAGAGTCAAAAGAGAAAGTATACTCCTCCGGCCAGTTGGACGAGGAAGAGGAAGACGACCGGTGGGAGGACAGTTTGGAAGAAATACCAATGGAAGAGACCGGTGCGAAGTAACCGGGCTGTGAAGTTGAAGATGTATGACGACATGTTAGGTGCATCTGGAGTTGGATCTACCATCAGTAATGATGGGATGATCACTATGTTGAACAACTATGTTCAAGGAATTGGTGATAGCCAGAGGTCAAACAACTTGACCGTTACGAGGCATTTGAAGTTTGATATGTCTCTTATGGCTAGTGGTGCATTTTGGGCGAGTCCTAACTATATGACTCAATATCATTGGGTTATTGTGGATCGTGATGTTGGTTCTACGTTTCCGACTCAGTTGAGTACTATCTTTGATATTCCGACTGGTGGTCAGGCTATGCCTTCCACCTATCGGATTAGGAGGGATGCGAATGAACGATTTATCGTGAAGAAGAAGTGGCAGACTCATCTGATGTCTACTGGTACTGATTATGGAGGAAAGCAGACCTATAAGGCGCCTTCAATGCCTAATTATAAGAAGGCTATGAACATTAATATTCGGAATATCAATGTCAAGACATTGTGGAAGGACACTGGAGGTGGCAAATATGAAGATGTGAAGGAGAATGCTATTCTTTACGTAGTGGTTAATGATAATACTGATAATACAAATATGTATGCTACTTTGTTTGGTAATTGTAGGGCTTATTTCTATTGATTATTAGAAATGCCCAATGATGTTGAAGTTGAATAAAAAATTTATTATTAAATTTGTTTGTGTAAGATTGAAATGTAGATATGTAAATATCTAGTATAATTGCCTTGGAAAACAAAAAACGAAAAAATGATTGCCGGAAAACGAAAAAAAAACCCCTCAGAAATTAGACCCCCGGAAAATCAATATATTTATATTAATCTGCAGCCCATCCACGAAGTGGATGTTACATATTTCGAAGAAATATCTTAACTATACCAAACTTCATCACTTGCTAAGTAATATACATCGCAATTAGCGTAAAACCAATCTTTCATAGATTCACTCATACAAGGTATCCAGTCCATATCTGGATTAGTAATAGCAATACAAGGTCTTCCGCCTTGAATGACTAAGTTTGGTTTATGTTTTATCCAAACACTATAATCTTCGTTACATCCGATAATAGATTTAAACAACTCCTGTTGTATTTTTTGATAGCGGATATCGTCTATTATATGGTATGTAGTGTGGTCTATATCGTATAGAGACCAATCTAATACCATGCCAGACATATAGTGGTGTCGGCCTAGAGATCTTGCCCACTGGGTCTTTCCTGTTCTGGAGGGTCCGCATATGTAGAGACTTCTTGGTCGGACTGGTCTGTTGTCTGGCTCCTGGACAAATTAAGTACGTTAGTGTCTTCACTACATGCTAGATCGCCACTAAGTCGATCTAGGTGGAAGTATTCTTCAAGAGTCATTTGTCTGTCTTGAAGAATTGCTCCCCTGCAATTCTCACATATTTCGTAATGTAAACAATCTGAACTTACGAAATATATATTTTGTTCCGCCCACTCTTTGATTGTGTCAGGTAGCCTAGAGAACTCCGTCCATCTGGGTGTGTAAGGTTGCACAACTGGCCTGAAATGATTGTTGGCGAAGGATAGAATGGAAGGCCATCTGAGAACGAAATCTGTTGGGCAGGACTCTCGTATGTTACTGAAGAACTCCTCCTTGGTGTTGGATGAATCAAGAATTCGTCTCCATTCCACGTTGCTGTTGCCAATACTGTTTGGAGAGCGCCCTCCCAGTCGAAGCTCTCCAAATGTTCTAGGGCTCGTGTCCTCCTTGGTGATATACTCGAATGCTCGCTTTGGGGCGTTGAGTCCGTCGATTCTTGGGTGAATCGTTCGACCGTCTGGGAGTATGATGTTGAAAAACAGGTTCCCATTGACGTCGAGTTTCTTGTCACACTGGATAATACAGTGTGTGTGGAATCCTCCTTCAGGTTGTTCTTCAGTAGGCTGATGATGTTCTAGTGATACTGCAAGGGATAGAATCACATATGATTCTAATAAGGTCTTCAGTTTCTCGAATATATAATCTTTAAAATCCCCACCTATTTGGGAATATGTGAGAAAAGCATTTTTCTTTTGAAAACGTAAATAACCGGGTTGGTTAGGGGTAGGTCTGTTTCTGTTTGGAGCACGTGGCATGTTTGTTTTTGTTTCCCTCTTCCGTACAATGAATGAAAAGAAATTGTATATATGAGAGGAAGAGGAACTTAAGAGGAATGAGGAACTGAAGAGGGAGGTAGAGGGATAAATAGGTAAACGCGGATAAGATT
Gene Information
|
NCBI Accession
|
YP_001715617.1
|
|
Location
|
168-437 |
|
Gene Name
|
V3 |
|
Protein Name
|
movement protein |
|
Coding Region
|
ATGATGGTCTGTATTCCCGACTGGTTATTTCTACTTTTCGTATTTAGTACGATTCTTCAGTCGGGAATTAATTTCTATGGTACCTTTCAGAGTGAGCGAATTTCCGCGAAGCTATCCAGCCTTGCTAGCCGTTTCGACGAGCTGTTTCTTGCGTTACAACAAGTGGTGTTTGCTCGGAATCGAGTCTCAAGTTCGCGAGCCGTTGACTCTAGAGGAAGGCGAGGACTTTCTTCAATTCCAGAAGGAAGTGAAGAAATTGCTGAAGCTTAA |
|
Protein Sequence
|
MMVCIPDWLFLLFVFSTILQSGINFYGTFQSERISAKLSSLASRFDELFLALQQVVFARNRVSSSRAVDSRGRRGLSSIPEGSEEIAEA |
|
NCBI Accession
|
YP_001715618.1
|
|
Location
|
244-609 |
|
Gene Name
|
V2 |
|
Protein Name
|
ss-ds DNA regulator |
|
Coding Region
|
ATGGTACCTTTCAGAGTGAGCGAATTTCCGCGAAGCTATCCAGCCTTGCTAGCCGTTTCGACGAGCTGTTTCTTGCGTTACAACAAGTGGTGTTTGCTCGGAATCGAGTCTCAAGTTCGCGAGCCGTTGACTCTAGAGGAAGGCGAGGACTTTCTTCAATTCCAGAAGGAAGTGAAGAAATTGCTGAAGCTTAAGGTTAGTTTTAAGCGTAAGTGTTGTTTGTACGAGGACATATACAAGAAGTATGGCGGTTCAGAGTCAAAAGAGAAAGTATACTCCTCCGGCCAGTTGGACGAGGAAGAGGAAGACGACCGGTGGGAGGACAGTTTGGAAGAAATACCAATGGAAGAGACCGGTGCGAAGTAA |
|
Protein Sequence
|
MVPFRVSEFPRSYPALLAVSTSCFLRYNKWCLLGIESQVREPLTLEEGEDFLQFQKEVKKLLKLKVSFKRKCCLYEDIYKKYGGSESKEKVYSSGQLDEEEEDDRWEDSLEEIPMEETGAK |
|
NCBI Accession
|
YP_001715619.1
|
|
Location
|
488-1240 |
|
Gene Name
|
V1 |
|
Protein Name
|
coat protein |
|
Coding Region
|
ATGGCGGTTCAGAGTCAAAAGAGAAAGTATACTCCTCCGGCCAGTTGGACGAGGAAGAGGAAGACGACCGGTGGGAGGACAGTTTGGAAGAAATACCAATGGAAGAGACCGGTGCGAAGTAACCGGGCTGTGAAGTTGAAGATGTATGACGACATGTTAGGTGCATCTGGAGTTGGATCTACCATCAGTAATGATGGGATGATCACTATGTTGAACAACTATGTTCAAGGAATTGGTGATAGCCAGAGGTCAAACAACTTGACCGTTACGAGGCATTTGAAGTTTGATATGTCTCTTATGGCTAGTGGTGCATTTTGGGCGAGTCCTAACTATATGACTCAATATCATTGGGTTATTGTGGATCGTGATGTTGGTTCTACGTTTCCGACTCAGTTGAGTACTATCTTTGATATTCCGACTGGTGGTCAGGCTATGCCTTCCACCTATCGGATTAGGAGGGATGCGAATGAACGATTTATCGTGAAGAAGAAGTGGCAGACTCATCTGATGTCTACTGGTACTGATTATGGAGGAAAGCAGACCTATAAGGCGCCTTCAATGCCTAATTATAAGAAGGCTATGAACATTAATATTCGGAATATCAATGTCAAGACATTGTGGAAGGACACTGGAGGTGGCAAATATGAAGATGTGAAGGAGAATGCTATTCTTTACGTAGTGGTTAATGATAATACTGATAATACAAATATGTATGCTACTTTGTTTGGTAATTGTAGGGCTTATTTCTATTGA |
|
Protein Sequence
|
MAVQSQKRKYTPPASWTRKRKTTGGRTVWKKYQWKRPVRSNRAVKLKMYDDMLGASGVGSTISNDGMITMLNNYVQGIGDSQRSNNLTVTRHLKFDMSLMASGAFWASPNYMTQYHWVIVDRDVGSTFPTQLSTIFDIPTGGQAMPSTYRIRRDANERFIVKKKWQTHLMSTGTDYGGKQTYKAPSMPNYKKAMNINIRNINVKTLWKDTGGGKYEDVKENAILYVVVNDNTDNTNMYATLFGNCRAYFY |
|
NCBI Accession
|
YP_001715620.1
|
|
Location
|
1486-1791 |
|
Gene Name
|
C2 |
|
Protein Name
|
hypothetical Rep protein |
|
Coding Region
|
ATGTCTGGCATGGTATTAGATTGGTCTCTATACGATATAGACCACACTACATACCATATAATAGACGATATCCGCTATCAAAAAATACAACAGGAGTTGTTTAAATCTATTATCGGATGTAACGAAGATTATAGTGTTTGGATAAAACATAAACCAAACTTAGTCATTCAAGGCGGAAGACCTTGTATTGCTATTACTAATCCAGATATGGACTGGATACCTTGTATGAGTGAATCTATGAAAGATTGGTTTTACGCTAATTGCGATGTATATTACTTAGCAAGTGATGAAGTTTGGTATAGTTAA |
|
Protein Sequence
|
MSGMVLDWSLYDIDHTTYHIIDDIRYQKIQQELFKSIIGCNEDYSVWIKHKPNLVIQGGRPCIAITNPDMDWIPCMSESMKDWFYANCDVYYLASDEVWYS |
|
NCBI Accession
|
YP_001715621.1
|
|
Location
|
1806-2714 |
|
Gene Name
|
C1 |
|
Protein Name
|
hypothetical RepA protein |
|
Coding Region
|
ATGCCACGTGCTCCAAACAGAAACAGACCTACCCCTAACCAACCCGGTTATTTACGTTTTCAAAAGAAAAATGCTTTTCTCACATATTCCCAAATAGGTGGGGATTTTAAAGATTATATATTCGAGAAACTGAAGACCTTATTAGAATCATATGTGATTCTATCCCTTGCAGTATCACTAGAACATCATCAGCCTACTGAAGAACAACCTGAAGGAGGATTCCACACACACTGTATTATCCAGTGTGACAAGAAACTCGACGTCAATGGGAACCTGTTTTTCAACATCATACTCCCAGACGGTCGAACGATTCACCCAAGAATCGACGGACTCAACGCCCCAAAGCGAGCATTCGAGTATATCACCAAGGAGGACACGAGCCCTAGAACATTTGGAGAGCTTCGACTGGGAGGGCGCTCTCCAAACAGTATTGGCAACAGCAACGTGGAATGGAGACGAATTCTTGATTCATCCAACACCAAGGAGGAGTTCTTCAGTAACATACGAGAGTCCTGCCCAACAGATTTCGTTCTCAGATGGCCTTCCATTCTATCCTTCGCCAACAATCATTTCAGGCCAGTTGTGCAACCTTACACACCCAGATGGACGGAGTTCTCTAGGCTACCTGACACAATCAAAGAGTGGGCGGAACAAAATATATATTTCGTAAGTTCAGATTGTTTACATTACGAAATATGTGAGAATTGCAGGGGAGCAATTCTTCAAGACAGACAAATGACTCTTGAAGAATACTTCCACCTAGATCGACTTAGTGGCGATCTAGCATGTAGTGAAGACACTAACGTACTTAATTTGTCCAGGAGCCAGACAACAGACCAGTCCGACCAAGAAGTCTCTACATATGCGGACCCTCCAGAACAGGAAAGACCCAGTGGGCAAGATCTCTAG |
|
Protein Sequence
|
MPRAPNRNRPTPNQPGYLRFQKKNAFLTYSQIGGDFKDYIFEKLKTLLESYVILSLAVSLEHHQPTEEQPEGGFHTHCIIQCDKKLDVNGNLFFNIILPDGRTIHPRIDGLNAPKRAFEYITKEDTSPRTFGELRLGGRSPNSIGNSNVEWRRILDSSNTKEEFFSNIRESCPTDFVLRWPSILSFANNHFRPVVQPYTPRWTEFSRLPDTIKEWAEQNIYFVSSDCLHYEICENCRGAILQDRQMTLEEYFHLDRLSGDLACSEDTNVLNLSRSQTTDQSDQEVSTYADPPEQERPSGQDL |