Beet curly top Iran virus
Basic Information
| Genus | Becurtovirus |
|---|---|
| NCBI Assembly | GCF_000879795.1 |
| Isolate | Iran: Kerman |
| Release date | 2015/2/22 |
| Submitter | Yazdi,H.R., Heydarnejad,J., Massumi,H., Bolok Yazdi,H.R., Hosseini Abhari,E. |
| Host | |
| Download | Genome |GFF3 |PEP |CDS |
Genomic Organization
JBrowse
Genome
NC_010417
Gene Information
| NCBI Accession | YP_001715617.1 |
|---|---|
| Location | 168-437 |
| Gene Name | V3 |
| Protein Name | movement protein |
| Coding Region | ATGATGGTCTGTATTCCCGACTGGTTATTTCTACTTTTCGTATTTAGTACGATTCTTCAGTCGGGAATTAATTTCTATGGTACCTTTCAGAGTGAGCGAATTTCCGCGAAGCTATCCAGCCTTGCTAGCCGTTTCGACGAGCTGTTTCTTGCGTTACAACAAGTGGTGTTTGCTCGGAATCGAGTCTCAAGTTCGCGAGCCGTTGACTCTAGAGGAAGGCGAGGACTTTCTTCAATTCCAGAAGGAAGTGAAGAAATTGCTGAAGCTTAA |
| Protein Sequence | MMVCIPDWLFLLFVFSTILQSGINFYGTFQSERISAKLSSLASRFDELFLALQQVVFARNRVSSSRAVDSRGRRGLSSIPEGSEEIAEA |
| NCBI Accession | YP_001715618.1 |
|---|---|
| Location | 244-609 |
| Gene Name | V2 |
| Protein Name | ss-ds DNA regulator |
| Coding Region | ATGGTACCTTTCAGAGTGAGCGAATTTCCGCGAAGCTATCCAGCCTTGCTAGCCGTTTCGACGAGCTGTTTCTTGCGTTACAACAAGTGGTGTTTGCTCGGAATCGAGTCTCAAGTTCGCGAGCCGTTGACTCTAGAGGAAGGCGAGGACTTTCTTCAATTCCAGAAGGAAGTGAAGAAATTGCTGAAGCTTAAGGTTAGTTTTAAGCGTAAGTGTTGTTTGTACGAGGACATATACAAGAAGTATGGCGGTTCAGAGTCAAAAGAGAAAGTATACTCCTCCGGCCAGTTGGACGAGGAAGAGGAAGACGACCGGTGGGAGGACAGTTTGGAAGAAATACCAATGGAAGAGACCGGTGCGAAGTAA |
| Protein Sequence | MVPFRVSEFPRSYPALLAVSTSCFLRYNKWCLLGIESQVREPLTLEEGEDFLQFQKEVKKLLKLKVSFKRKCCLYEDIYKKYGGSESKEKVYSSGQLDEEEEDDRWEDSLEEIPMEETGAK |
| NCBI Accession | YP_001715619.1 |
|---|---|
| Location | 488-1240 |
| Gene Name | V1 |
| Protein Name | coat protein |
| Coding Region | ATGGCGGTTCAGAGTCAAAAGAGAAAGTATACTCCTCCGGCCAGTTGGACGAGGAAGAGGAAGACGACCGGTGGGAGGACAGTTTGGAAGAAATACCAATGGAAGAGACCGGTGCGAAGTAACCGGGCTGTGAAGTTGAAGATGTATGACGACATGTTAGGTGCATCTGGAGTTGGATCTACCATCAGTAATGATGGGATGATCACTATGTTGAACAACTATGTTCAAGGAATTGGTGATAGCCAGAGGTCAAACAACTTGACCGTTACGAGGCATTTGAAGTTTGATATGTCTCTTATGGCTAGTGGTGCATTTTGGGCGAGTCCTAACTATATGACTCAATATCATTGGGTTATTGTGGATCGTGATGTTGGTTCTACGTTTCCGACTCAGTTGAGTACTATCTTTGATATTCCGACTGGTGGTCAGGCTATGCCTTCCACCTATCGGATTAGGAGGGATGCGAATGAACGATTTATCGTGAAGAAGAAGTGGCAGACTCATCTGATGTCTACTGGTACTGATTATGGAGGAAAGCAGACCTATAAGGCGCCTTCAATGCCTAATTATAAGAAGGCTATGAACATTAATATTCGGAATATCAATGTCAAGACATTGTGGAAGGACACTGGAGGTGGCAAATATGAAGATGTGAAGGAGAATGCTATTCTTTACGTAGTGGTTAATGATAATACTGATAATACAAATATGTATGCTACTTTGTTTGGTAATTGTAGGGCTTATTTCTATTGA |
| Protein Sequence | MAVQSQKRKYTPPASWTRKRKTTGGRTVWKKYQWKRPVRSNRAVKLKMYDDMLGASGVGSTISNDGMITMLNNYVQGIGDSQRSNNLTVTRHLKFDMSLMASGAFWASPNYMTQYHWVIVDRDVGSTFPTQLSTIFDIPTGGQAMPSTYRIRRDANERFIVKKKWQTHLMSTGTDYGGKQTYKAPSMPNYKKAMNINIRNINVKTLWKDTGGGKYEDVKENAILYVVVNDNTDNTNMYATLFGNCRAYFY |
| NCBI Accession | YP_001715620.1 |
|---|---|
| Location | 1486-1791 |
| Gene Name | C2 |
| Protein Name | hypothetical Rep protein |
| Coding Region | ATGTCTGGCATGGTATTAGATTGGTCTCTATACGATATAGACCACACTACATACCATATAATAGACGATATCCGCTATCAAAAAATACAACAGGAGTTGTTTAAATCTATTATCGGATGTAACGAAGATTATAGTGTTTGGATAAAACATAAACCAAACTTAGTCATTCAAGGCGGAAGACCTTGTATTGCTATTACTAATCCAGATATGGACTGGATACCTTGTATGAGTGAATCTATGAAAGATTGGTTTTACGCTAATTGCGATGTATATTACTTAGCAAGTGATGAAGTTTGGTATAGTTAA |
| Protein Sequence | MSGMVLDWSLYDIDHTTYHIIDDIRYQKIQQELFKSIIGCNEDYSVWIKHKPNLVIQGGRPCIAITNPDMDWIPCMSESMKDWFYANCDVYYLASDEVWYS |
| NCBI Accession | YP_001715621.1 |
|---|---|
| Location | 1806-2714 |
| Gene Name | C1 |
| Protein Name | hypothetical RepA protein |
| Coding Region | ATGCCACGTGCTCCAAACAGAAACAGACCTACCCCTAACCAACCCGGTTATTTACGTTTTCAAAAGAAAAATGCTTTTCTCACATATTCCCAAATAGGTGGGGATTTTAAAGATTATATATTCGAGAAACTGAAGACCTTATTAGAATCATATGTGATTCTATCCCTTGCAGTATCACTAGAACATCATCAGCCTACTGAAGAACAACCTGAAGGAGGATTCCACACACACTGTATTATCCAGTGTGACAAGAAACTCGACGTCAATGGGAACCTGTTTTTCAACATCATACTCCCAGACGGTCGAACGATTCACCCAAGAATCGACGGACTCAACGCCCCAAAGCGAGCATTCGAGTATATCACCAAGGAGGACACGAGCCCTAGAACATTTGGAGAGCTTCGACTGGGAGGGCGCTCTCCAAACAGTATTGGCAACAGCAACGTGGAATGGAGACGAATTCTTGATTCATCCAACACCAAGGAGGAGTTCTTCAGTAACATACGAGAGTCCTGCCCAACAGATTTCGTTCTCAGATGGCCTTCCATTCTATCCTTCGCCAACAATCATTTCAGGCCAGTTGTGCAACCTTACACACCCAGATGGACGGAGTTCTCTAGGCTACCTGACACAATCAAAGAGTGGGCGGAACAAAATATATATTTCGTAAGTTCAGATTGTTTACATTACGAAATATGTGAGAATTGCAGGGGAGCAATTCTTCAAGACAGACAAATGACTCTTGAAGAATACTTCCACCTAGATCGACTTAGTGGCGATCTAGCATGTAGTGAAGACACTAACGTACTTAATTTGTCCAGGAGCCAGACAACAGACCAGTCCGACCAAGAAGTCTCTACATATGCGGACCCTCCAGAACAGGAAAGACCCAGTGGGCAAGATCTCTAG |
| Protein Sequence | MPRAPNRNRPTPNQPGYLRFQKKNAFLTYSQIGGDFKDYIFEKLKTLLESYVILSLAVSLEHHQPTEEQPEGGFHTHCIIQCDKKLDVNGNLFFNIILPDGRTIHPRIDGLNAPKRAFEYITKEDTSPRTFGELRLGGRSPNSIGNSNVEWRRILDSSNTKEEFFSNIRESCPTDFVLRWPSILSFANNHFRPVVQPYTPRWTEFSRLPDTIKEWAEQNIYFVSSDCLHYEICENCRGAILQDRQMTLEEYFHLDRLSGDLACSEDTNVLNLSRSQTTDQSDQEVSTYADPPEQERPSGQDL |
References More References in PubMed
| 1 |
Functional Analysis of V2 Protein of Beet Curly Top Iran Virus. Bahari A, et al. Plants (Basel). 2022 Dec 2;11(23):3351. doi: 10.3390/plants11233351. PMID: 36501393 |
|---|---|
| 2 |
Yıldırım K, et al. J Virol Methods. 2022 Feb;300:114380. doi: 10.1016/j.jviromet.2021.114380. Epub 2021 Nov 24. PMID: 34838538 |
| 3 |
Ebrahimi S, et al. Viruses. 2023 Sep 26;15(10):1996. doi: 10.3390/v15101996. PMID: 37896771 |
| 4 |
Yıldırım K, et al. Int J Mol Sci. 2023 Mar 30;24(7):6515. doi: 10.3390/ijms24076515. PMID: 37047489 |
| 5 |
Han J, et al. J Gen Virol. 2024 Jul;105(7):002012. doi: 10.1099/jgv.0.002012. PMID: 39073409 |
| 6 |
Strausbaugh CA, et al. Plant Dis. 2017 Aug;101(8):1373-1382. doi: 10.1094/PDIS-03-17-0381-RE. Epub 2017 May 25. PMID: 30678603 |
| 7 |
Pest categorisation of Beet curly top virus (non-EU isolates). EFSA Panel on Plant Health (PLH), et al. EFSA J. 2017 Oct 11;15(10):e04998. doi: 10.2903/j.efsa.2017.4998. eCollection 2017 Oct. PMID: 32625295 |
| 8 |
Regulatory Roles of Small Non-coding RNAs in Sugar Beet Resistance Against Beet curly top virus. Majumdar R, et al. Front Plant Sci. 2022 Jan 10;12:780877. doi: 10.3389/fpls.2021.780877. eCollection 2021. PMID: 35082811 |
| 9 |
Splicing features in the expression of the complementary-sense genes of Beet curly top Iran virus. Bozorgi N, et al. Virus Genes. 2017 Apr;53(2):323-327. doi: 10.1007/s11262-016-1422-y. Epub 2016 Dec 21. PMID: 28004232 |
| 10 |
Montazeri R, et al. Iran J Biotechnol. 2024 Jul 1;22(3):e3831. doi: 10.30498/ijb.2024.425159.3831. eCollection 2024 Jul. PMID: 39737209 |