Genus | Begomovirus |
---|---|
NCBI Assembly | GCF_001876915.1 |
Isolate | Colombia |
Release date | 2016/11/13 |
Submitter | Vaca-Vaca,J.C., Carrasco-Lozano,E.C., Lopez-Lopez,K., Carrasco-Lozano,E. |
Host | |
Download | Genome |GFF3 |PEP |CDS |
NCBI Accession | YP_009316180.1 |
---|---|
Location | 186-941 |
Protein Name | AV1 |
Coding Region | ATGCCTAAGCGGGATGCCCCATGGCGCTCGATGGCGGGAACCTCAAAGGTTAGTCGCAATGCCAATTACTCTCCTCGTTCAGGCAGTGGCCCAAAGTTAAATAGGGCCTCTGAATGGGTTAACAGGCCCATGTACAGGAAGCCCAGGATCTACCGGACGCTTAGGACTCCTGATGTCCCACGAGGATGTGAAGGCCCGTGTAAGGTACAGTCCTACGAACAGCGTCACGACATATCCCATGTTGGCAAGGTAATGTGTATCTCTGATGTCACACGTGGTAATGGTATCACCCACCGTGTCGGCAAGCGTTTCTGTGTTAAGTCTGTGTATATCCTAGGCAAGATATGGATGGATGAGAACATCAAGCTCAAGAACCACACGAACAGTGTTATGTTCTGGTTGGTCCGAGACCGTAGACCGTATGGAACTCCCATGGACTTTGGCCAGGTGTTCAACATGTTCGACAACGAGCCCAGTACAGCTACGGTTAAGAACGATCTCCGCGATCGTTACCAGGTCATGCATAAGTTCTATGGGAAGGTGACAGGTGGACAATATGCCAGCAATGAACAGGCAATCGTCAAGCGTTTCTGGAAGGTCAACAACCACGTTGTCTACAACCATCAAGAGGCTGGCAAATATGAGAATCACACGGAGAACGCCTTGTTATTGTACATGGCATGTACCCATGCATCTAACCCCGTCTATGCAACTCTCAAGATTCGGATCTATTTTTACGATTCGATTTTGAATTAA |
Protein Sequence | MPKRDAPWRSMAGTSKVSRNANYSPRSGSGPKLNRASEWVNRPMYRKPRIYRTLRTPDVPRGCEGPCKVQSYEQRHDISHVGKVMCISDVTRGNGITHRVGKRFCVKSVYILGKIWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATVKNDLRDRYQVMHKFYGKVTGGQYASNEQAIVKRFWKVNNHVVYNHQEAGKYENHTENALLLYMACTHASNPVYATLKIRIYFYDSILN |
NCBI Accession | YP_009316181.1 |
---|---|
Location | 938-1336 |
Protein Name | AC3 |
Coding Region | ATGGATTCACGCACAGGGGAGTTCATCACTGCACGTCAGGCAGAGAATGGCGTGTATATCTGGGAGATAGAAAATCCCCTATATTTCAAGATAATTCAAGTAGAGGACCTGCGATATACGATGACCAGGGTATATCACGTGCAAATACGGTTCAACCACAACCTGAGGAGAGCGTTGCATCTCCACAAAGCTTACCTGAACTTCCAAGTCTGGACAGTATCCCTGACAGCTTCTGGGTTGACTTATTTAAATAGGTTTAGACATTTAGTCCTCATGTATTTAGATCAGTTAGGCGTAATTTCTATTAACAATGTCATTAGAGCTGTTCGATTCGCAACAGACAGGGTTTATGTATCTCATGTACTGGAAAATCATTCAATAAAATATAAATTTTATTAA |
Protein Sequence | MDSRTGEFITARQAENGVYIWEIENPLYFKIIQVEDLRYTMTRVYHVQIRFNHNLRRALHLHKAYLNFQVWTVSLTASGLTYLNRFRHLVLMYLDQLGVISINNVIRAVRFATDRVYVSHVLENHSIKYKFY |
NCBI Accession | YP_009316182.1 |
---|---|
Location | 1083-1472 |
Protein Name | AC2 |
Coding Region | ATGCGATCTTCATCACCCTCGAATCCCCCCTCTATCAAGATAGCACACAGACAGGCTAAGAGGCGTGCGATCAGACGACGACGCATTGACTTGCAGTGCGGGTGCTCCATTTACTTCCACATAGGCTGCACGGGACATGGATTCACGCACAGGGGAGTTCATCACTGCACGTCAGGCAGAGAATGGCGTGTATATCTGGGAGATAGAAAATCCCCTATATTTCAAGATAATTCAAGTAGAGGACCTGCGATATACGATGACCAGGGTATATCACGTGCAAATACGGTTCAACCACAACCTGAGGAGAGCGTTGCATCTCCACAAAGCTTACCTGAACTTCCAAGTCTGGACAGTATCCCTGACAGCTTCTGGGTTGACTTATTTAAATAG |
Protein Sequence | MRSSSPSNPPSIKIAHRQAKRRAIRRRRIDLQCGCSIYFHIGCTGHGFTHRGVHHCTSGREWRVYLGDRKSPIFQDNSSRGPAIYDDQGISRANTVQPQPEESVASPQSLPELPSLDSIPDSFWVDLFK |
NCBI Accession | YP_009316183.1 |
---|---|
Location | 1414-2469 |
Protein Name | AC1 |
Coding Region | ATGCCACCGCCTAGGAAATTCAGAGTGAATGCCAAGAACTATTTCCTCACTTATCCACAATGCTCTCTTACTAAAGCAGAAGTACTTTCCCAAATTCAACACATTAAAACCCCAGTTAATAAGAAGTTCATCAAGGTCTCCAGGGAATTACACGAAAATGGGGAGCCTCATCTCCACGTCCTCATCCAGTTCGAAGGGAAATACCAATGCCAGAATAACAGATTCTTCGATCTGGTCTCCCCAACTAGGTCAGCACATTTCCATCCGAACATTCAGGGAGCTAAGTCGAGCTCCGACGTCAAGTCTTACATCGACAAGGACGGAGACACAGTTGAATGGGGACAGTTCCAGATCGACGGCAGGTCTGCTAGAGGAGGTCAGCAGTCTACTAACGACACATATGCCAAGGCGTTGAATGCAGGATCAGCAGAGGCTGCCCTGCAAATAATAAAGGAAGAACAACCGCAACATTTCTTCCTTCAGCATCACAACCTGGTTGCTAACGCAACCAGAATATTCCAAAAGGCTCCTGAACCGTGGGTTCCTCCGTTTCCACTCTCCTCCTTCACTAACGTGCCCGACGAGATGCAAGAGTGGGCAGATAGTTATTTTTCTTTGAGTCCAGCTGCGCGGCCGGAAAGACCTATTAGTATCATCGTCGAAGGTGATTCTAGGACGGGGAAGACGATGTGGGCACGTGCGTTAGGCCCACATAATTATCTCAGTGGACACCTAGACTTCAATTCCCGGGTTTTCTCAGACGAAGTGGAGTATAACGTAATAGATGACGTCGCACCGCACTATCTAAAGCTAAAGCACTGGAAAGAATTGATAGGGGCTCAAAAGATGTGGCAGTCAAATTGCAAGTACGGTAAGCCAGTCCTTATTAAAGGGGGGATTCCATCAATCGTGCTTTGCAATCCTGGTGAGGGTGCCAGCTATAAAGATTTCCTGAACAAAGCGGAAAATGCATCGCTCAGAAACTGGACGTTAAAGAATGCGATCTTCATCACCCTCGAATCCCCCCTCTATCAAGATAGCACACAGACAGGCTAA |
Protein Sequence | MPPPRKFRVNAKNYFLTYPQCSLTKAEVLSQIQHIKTPVNKKFIKVSRELHENGEPHLHVLIQFEGKYQCQNNRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYIDKDGDTVEWGQFQIDGRSARGGQQSTNDTYAKALNAGSAEAALQIIKEEQPQHFFLQHHNLVANATRIFQKAPEPWVPPFPLSSFTNVPDEMQEWADSYFSLSPAARPERPISIIVEGDSRTGKTMWARALGPHNYLSGHLDFNSRVFSDEVEYNVIDDVAPHYLKLKHWKELIGAQKMWQSNCKYGKPVLIKGGIPSIVLCNPGEGASYKDFLNKAENASLRNWTLKNAIFITLESPLYQDSTQTG |
NCBI Accession | YP_009316184.1 |
---|---|
Location | 2055-2441 |
Protein Name | AC4 |
Coding Region | ATGCCAAGAACTATTTCCTCACTTATCCACAATGCTCTCTTACTAAAGCAGAAGTACTTTCCCAAATTCAACACATTAAAACCCCAGTTAATAAGAAGTTCATCAAGGTCTCCAGGGAATTACACGAAAATGGGGAGCCTCATCTCCACGTCCTCATCCAGTTCGAAGGGAAATACCAATGCCAGAATAACAGATTCTTCGATCTGGTCTCCCCAACTAGGTCAGCACATTTCCATCCGAACATTCAGGGAGCTAAGTCGAGCTCCGACGTCAAGTCTTACATCGACAAGGACGGAGACACAGTTGAATGGGGACAGTTCCAGATCGACGGCAGGTCTGCTAGAGGAGGTCAGCAGTCTACTAACGACACATATGCCAAGGCGTTGA |
Protein Sequence | MPRTISSLIHNALLLKQKYFPKFNTLKPQLIRSSSRSPGNYTKMGSLISTSSSSSKGNTNARITDSSIWSPQLGQHISIRTFRELSRAPTSSLTSTRTETQLNGDSSRSTAGLLEEVSSLLTTHMPRR |
NCBI Accession | YP_009316185.1 |
---|---|
Location | 388-1158 |
Protein Name | BV1 |
Coding Region | ATGTATCCCTCGAGGAATAAACGTGGTTTGTCCTTCACCCCACGTCGATTTTATGCTCGAAACACTGTGTTCAACCGCCCGCATTCTGGAAAACGTCAAGCCTGGAAACGTCGAGGTGCCAATTCAAACAAGTCGGATGATGAGCCCAGAATGTCGTCCCAACGCATACATGAGAATCAGTATGGGCCAGAATTCGTTATGCCCCATAACCAAGCCATTTCTACGTTTATCAGCTACCCATGCGTTGGTAAGACCGAGCCCAACCGAAGTAGGTCCTATATTAAGTTGAAACGACTCCGTTTCAAGGGTACTGTGAAGATTGAACGTGTTCAACCAGATATGAACATGGATGGTTCTACCCCCAAAGTGGAAGGAGTGTTTACTCTCGTGGTGGTTATGGATCGCAAACCCCACCTGGGTGCATCTGGGTGTCTGCATACATTCGACGAGCTGTTCGGTGCAAGGATCCATAGCCATGGTAACCTGAGCATAACCCCCTCTCTGAAAGACCGTTTCTACATACGACACGTATTCAAACGTGTATTGTCCGTGGAGAAGGATACGATGATGGTCGACGTGGAAGGATCTACAACGCTCTCTAACAGGCGTTTTAATTGCTGGTCCACATTCAAGGATCTTGATCATGACTCATGCAACGGTGTTTATGATAACATTAGCAAGAACGCCCTGTTAGTTTATTATTGTTGGATGTCAGATACTGTGTCTAAGGCATCAACATTTGTATCGTTTGACCTTGATTATATAGGTTGA |
Protein Sequence | MYPSRNKRGLSFTPRRFYARNTVFNRPHSGKRQAWKRRGANSNKSDDEPRMSSQRIHENQYGPEFVMPHNQAISTFISYPCVGKTEPNRSRSYIKLKRLRFKGTVKIERVQPDMNMDGSTPKVEGVFTLVVVMDRKPHLGASGCLHTFDELFGARIHSHGNLSITPSLKDRFYIRHVFKRVLSVEKDTMMVDVEGSTTLSNRRFNCWSTFKDLDHDSCNGVYDNISKNALLVYYCWMSDTVSKASTFVSFDLDYIG |
NCBI Accession | YP_009316186.1 |
---|---|
Location | 1225-2106 |
Protein Name | BC1 |
Coding Region | ATGGATTCTCAGTTAGTAAATCCTCCAAGTGCCTTTAACTACATAGAGTCCCATCGGGACGAGTACCAGCTTTCTCATGACCTAACTGAGATAATTATGCAATTCCCGTCGACGGCGTCTCAGTTAACAGCCAGACTCAGTCGGAGTTGCATGAAAATAGACCACTGCGTCATAGAGTACCGACAACAGGTTCCAATTAACGCGACGGGATCTGTTATAGTGGAGATTCATGACAAGAGAATGACCGACAACGAGTCTTTGCAGGCGTCGTGGACTTTTCCGATCAGATGCAACATAGATCTCCACTATTTCTCATCTTCCTTCTTTTCCCTCAAAGATCCTATTCCTTGGAAACTCTATTACAGAGTTTGTGATACGAATGTTCATCAGAGGACCCACTTCGCCAAGTTCAAAGGGAAATTGAAACTATCCACGGCTAAACACTCCGTAGATATCCCCTTCCGGGCACCGACGGTTAAGATCTTGTCCAAACAGTTCACCGACAAAGACGTGGATTTCTCCCACGTGGACTATGGGAGATGGGAAAGGAAGATAATAAGGTCCGCATCCATGTCCAGGATTGGGCTTCCGGGCCCAATTGAAATAAAGCCAGGAGAGTCGTGGGCTTCAAGGAGTACAGTTGGGCTAAGTAATTCGGATGCGGACTCGGAGGTGGAGAACGCAATGCATCCATATAGACATCTCAGTAGGCTGGGAACGAGCGTGTTAGACCCAGGGGAGTCTGCTTCGATTGTAGGAGCCCAGCGAGCCGAATCCAACATTACTATGACAGTGGGCCAGTTGAACGAGCTTGTTCGATCCACTGTACAAGAATGTATTAATAGTAATTGTAAGGCTACTCAGCCCAAATCACTACAATAA |
Protein Sequence | MDSQLVNPPSAFNYIESHRDEYQLSHDLTEIIMQFPSTASQLTARLSRSCMKIDHCVIEYRQQVPINATGSVIVEIHDKRMTDNESLQASWTFPIRCNIDLHYFSSSFFSLKDPIPWKLYYRVCDTNVHQRTHFAKFKGKLKLSTAKHSVDIPFRAPTVKILSKQFTDKDVDFSHVDYGRWERKIIRSASMSRIGLPGPIEIKPGESWASRSTVGLSNSDADSEVENAMHPYRHLSRLGTSVLDPGESASIVGAQRAESNITMTVGQLNELVRSTVQECINSNCKATQPKSLQ |
1 |
Melo AM, et al. Arch Virol. 2016 Sep;161(9):2605-8. doi: 10.1007/s00705-016-2919-3. Epub 2016 Jun 8. PMID: 27278930 |
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2 |
First Report of Passiflora latent virus in Passion fruit (Passiflora edulis) in China. Bao S, et al. Plant Dis. 2023 Jun 27. doi: 10.1094/PDIS-05-23-0896-PDN. Online ahead of print. PMID: 37368448 |
3 |
Roy A, et al. Plant Dis. 2022 Dec 5. doi: 10.1094/PDIS-09-22-2267-PDN. Online ahead of print. PMID: 36471457 |
4 |
Vaca-Vaca JC, et al. Arch Virol. 2017 Feb;162(2):573-576. doi: 10.1007/s00705-016-3098-y. Epub 2016 Oct 14. PMID: 27743253 |
5 |
Chen S, et al. Virol J. 2018 Nov 1;15(1):168. doi: 10.1186/s12985-018-1084-6. PMID: 30382859 |
6 |
A new species of Neohydatothrips (Thysanoptera: Thripidae) from India. Rachana RR. Zootaxa. 2021 Jan 28;4920(2):zootaxa.4920.2.10. doi: 10.11646/zootaxa.4920.2.10. PMID: 33756672 |