Genus | Begomovirus |
---|---|
NCBI Assembly | GCF_000841085.1 |
Release date | 2015/2/12 |
Submitter | Saxena,S., Hallan,V. |
Host | |
Download | Genome |GFF3 |PEP |CDS |
NCBI Accession | NP_689456.1 |
---|---|
Location | 150-506 |
Gene Name | AV2 |
Protein Name | pre-coat protein |
Coding Region | ATGTGGGATCCATTGTTGAACGAGTTTCCCGAAACCGTCCACGGTTTTATATGTATGTTAGCAGTTAAATATCTGCAGTTATTAAAAAAGACTTATTCTCCTGACACATTAGGTTACGATTTATTTAGGGATTTAATTTCAGTTATTAGGGCTAGAAATTATGTCGAAGCGACCAGCAGATATATTCATTTCCACGCCCGCTTCGAAGGTACGCCGCCGTCTCAACTTCGACAGCCCGTATGTGAGCCGTGCTGCTGCCCCCATTGTCCGCGTCACCAAAGCAAAAGCATGGGCGAACAGGCCCATGAACAGAAAGCCCAGGATGTACAGGATGTACAGAAGTCCAGATGTCCCTAG |
Protein Sequence | MWDPLLNEFPETVHGFICMLAVKYLQLLKKTYSPDTLGYDLFRDLISVIRARNYVEATSRYIHFHARFEGTPPSQLRQPVCEPCCCPHCPRHQSKSMGEQAHEQKAQDVQDVQKSRCP |
NCBI Accession | NP_689457.1 |
---|---|
Location | 301-618 |
Gene Name | AC5 |
Protein Name | AC5 protein |
Coding Region | ATGGGTCAGCCCATTTCCACGAGTAACATCACTAATACACATAACTTTACCTATATGCTGAATGTCATGTCTAGACTCAAAAGACTGGACCTTACATGGGCCTTCACATCCTCTAGGGACATCTGGACTTCTGTACATCCTGTACATCCTGGGCTTTCTGTTCATGGGCCTGTTCGCCCATGCTTTTGCTTTGGTGACGCGGACAATGGGGGCAGCAGCACGGCTCACATACGGGCTGTCGAAGTTGAGACGGCGGCGTACCTTCGAAGCGGGCGTGGAAATGAATATATCTGCTGGTCGCTTCGACATAATTTCTAG |
Protein Sequence | MGQPISTSNITNTHNFTYMLNVMSRLKRLDLTWAFTSSRDIWTSVHPVHPGLSVHGPVRPCFCFGDADNGGSSTAHIRAVEVETAAYLRSGRGNEYICWSLRHNF |
NCBI Accession | NP_689458.1 |
---|---|
Location | 310-1080 |
Gene Name | AV1 |
Protein Name | Coat protein |
Coding Region | ATGTCGAAGCGACCAGCAGATATATTCATTTCCACGCCCGCTTCGAAGGTACGCCGCCGTCTCAACTTCGACAGCCCGTATGTGAGCCGTGCTGCTGCCCCCATTGTCCGCGTCACCAAAGCAAAAGCATGGGCGAACAGGCCCATGAACAGAAAGCCCAGGATGTACAGGATGTACAGAAGTCCAGATGTCCCTAGAGGATGTGAAGGCCCATGTAAGGTCCAGTCTTTTGAGTCTAGACATGACATTCAGCATATAGGTAAAGTTATGTGTATTAGTGATGTTACTCGTGGAAATGGGCTGACCCATAGAGTTGGTAAGCGTTTTTGTGTTAAGTCTGTTAATGTTTTGGGCAAGATCTGGATGGATGAAAATATTAAGACTAAGGATCACACGAATAGTGTGATGTTCTTTTTAGTTAGGGATCGTAGACCTGTAGATAAACCACAAGATTTTGGAGAGGTATTTAACATGTTTGATAATGAGCCCAGTACGGCTACTGTGAAGAATGTTCATCGTGATAGGTATCAAGTTCTTCGGAAATGGCATGCAACTGTTACGGGTGGACAATATGCGTCAAAGGAACAAGCCCTCGTGAAGAAGTTTGTTAGGGTTAACAATTATGTTGTATATAACCAGCAAGAAGCTGGCAAGTATGAGAATCATTCTGAGAATGCGTTAATGTTGTATATGGCATGTACTCATGCCTCTAACCCAGTGTATGCTACTTTGAAGATACGGATCTATTTCTATGATTCCGTAACAAATTAA |
Protein Sequence | MSKRPADIFISTPASKVRRRLNFDSPYVSRAAAPIVRVTKAKAWANRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDIQHIGKVMCISDVTRGNGLTHRVGKRFCVKSVNVLGKIWMDENIKTKDHTNSVMFFLVRDRRPVDKPQDFGEVFNMFDNEPSTATVKNVHRDRYQVLRKWHATVTGGQYASKEQALVKKFVRVNNYVVYNQQEAGKYENHSENALMLYMACTHASNPVYATLKIRIYFYDSVTN |
NCBI Accession | NP_689459.1 |
---|---|
Location | 1077-1481 |
Gene Name | AC3 |
Protein Name | replicase-associated protein |
Coding Region | ATGGATTCACGCACAGGGGAACTCATCACTGCAGCTCAAGCAGAGAATGGCGTGTTTATCTGGGAGATTCAAAATCCCCTGTATTTCAAGATAACAGAACACCACAACCGTCCATTCACAATGAAAGAAGACATAATCAAAGTCCAAATACAGTTCAACTACAACCTGAGGAAAGCGTTGGGGATGCACAAATGTTTTCTAGTCTACCGAATCTGGATGACTTCACAGCCTCAGACTGGTCGTTTCTTAGGGGTCTTTAAGACTCAAGTTTTAAAATATTTAGATAATTTAGGAGTTAACAGTATTAATAATGTAATCAGATCAGTTGATCATGTTTTATGGGATGTATTACAACACATTGTATATGTAGAACAATCATATTCAATAAAATTTAATATTTATTAA |
Protein Sequence | MDSRTGELITAAQAENGVFIWEIQNPLYFKITEHHNRPFTMKEDIIKVQIQFNYNLRKALGMHKCFLVYRIWMTSQPQTGRFLGVFKTQVLKYLDNLGVNSINNVIRSVDHVLWDVLQHIVYVEQSYSIKFNIY |
NCBI Accession | NP_689460.1 |
---|---|
Location | 1222-1626 |
Gene Name | AC2 |
Protein Name | replicase-associated protein |
Coding Region | ATGCGATCTTCGTCACCCTCGAAGGCCCACTCTACTCAGGTTCCAATCAAAGTGCAGCACAGGCTAGCCAAGAAGAGGAACAGACGTCGTCGTGTTGATCTCCCTTGTGGATGTTCATATTTCATAGCACTAGCCTGTCACAATTATGGATTCACGCACAGGGGAACTCATCACTGCAGCTCAAGCAGAGAATGGCGTGTTTATCTGGGAGATTCAAAATCCCCTGTATTTCAAGATAACAGAACACCACAACCGTCCATTCACAATGAAAGAAGACATAATCAAAGTCCAAATACAGTTCAACTACAACCTGAGGAAAGCGTTGGGGATGCACAAATGTTTTCTAGTCTACCGAATCTGGATGACTTCACAGCCTCAGACTGGTCGTTTCTTAGGGGTCTTTAA |
Protein Sequence | MRSSSPSKAHSTQVPIKVQHRLAKKRNRRRRVDLPCGCSYFIALACHNYGFTHRGTHHCSSSREWRVYLGDSKSPVFQDNRTPQPSIHNERRHNQSPNTVQLQPEESVGDAQMFSSLPNLDDFTASDWSFLRGL |
NCBI Accession | NP_689461.1 |
---|---|
Location | 1529-2614 |
Gene Name | AC1 |
Protein Name | replicase |
Coding Region | ATGCCTCGTCTTAACTCTTTTTGTGTTAATGCCAAAAATATCTTCCTCACTTATCCAAAATGCCCAATACCCAAAGAGCAAATGCTCGAGATTCTTCAGTCAATAAATTGCCCATCTGATAAATTATTTATCAGAGTGGCACAAGAAAAACACCAAGATGGGTCTCTGCATATCCATGCCCTCATCCAGTTCAAAGGTAAATCCAAGTTCAGAAACACCAGACATTTCGATGTCACTCACCCTAATAACTCCACCCAATTCAACCCAAACTTCCAGGGAGCTAAGTCCAGCTCTGATGTCAAGTCCTACATCGAGGAGGACAGTGATTACATCGACTGGGGTCAGTTTCAGATCGATGGAAGATATGGTCGAGGAGGTCAACAGACAGCTAATGATGCAGCAGCAGAGGCCCTAAATGCAGGTTCAGCTGACGCAGCTTTAGCAATAAATAGGGAAAAACTCCCTAAAGATTTTATTTTTCAATATCATAATTTAAAATGTAATTTAGATAGGATTTTTACACCTCCTGTAGAGGTTTATGTTTCTCCTTTTTTATCTTCTTCTTTTAATCAAGTTCCTGAAGAACTTGAAGAATGGGCTGTTGAGAATGTAATGGGTGCCGCTGCGCGGACTTTGAGACCCATGAGTATTGTCATAGAGGGTGATAGTAGAACAGGAAAGACGATGTGGGCTAGGTCTTTGGGTCCACATAATTATCTGTGTGGTCACTTAGACCTTAGTCCTAAGGTCTACAATAATGATGCCTGGTACAACGTCATTGATGACGTCGATCCGCATTATTTAAAGCACTTTAAGGAATTCATGGGGGCCCAAAGGGACTGGCAATCAAATACAAAGTACGGAAAGCCAGTTCAAATTAAAGGAGGAATACCCACTATCTTCCTCTGCAATCCAGGACCCAACTCAAGCTATAAAGAGTTCTTGGACGAAGAGAAAAATAACGCACTGAAAAATTGGGCTTTAAAGAATGCGATCTTCGTCACCCTCGAAGGCCCACTCTACTCAGGTTCCAATCAAAGTGCAGCACAGGCTAGCCAAGAAGAGGAACAGACGTCGTCGTGTTGA |
Protein Sequence | MPRLNSFCVNAKNIFLTYPKCPIPKEQMLEILQSINCPSDKLFIRVAQEKHQDGSLHIHALIQFKGKSKFRNTRHFDVTHPNNSTQFNPNFQGAKSSSDVKSYIEEDSDYIDWGQFQIDGRYGRGGQQTANDAAAEALNAGSADAALAINREKLPKDFIFQYHNLKCNLDRIFTPPVEVYVSPFLSSSFNQVPEELEEWAVENVMGAAARTLRPMSIVIEGDSRTGKTMWARSLGPHNYLCGHLDLSPKVYNNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLDEEKNNALKNWALKNAIFVTLEGPLYSGSNQSAAQASQEEEQTSSC |
NCBI Accession | NP_689462.1 |
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Location | 2200-2457 |
Gene Name | AC4 |
Protein Name | AC4 protein |
Coding Region | ATGGGTCTCTGCATATCCATGCCCTCATCCAGTTCAAAGGTAAATCCAAGTTCAGAAACACCAGACATTTCGATGTCACTCACCCTAATAACTCCACCCAATTCAACCCAAACTTCCAGGGAGCTAAGTCCAGCTCTGATGTCAAGTCCTACATCGAGGAGGACAGTGATTACATCGACTGGGGTCAGTTTCAGATCGATGGAAGATATGGTCGAGGAGGTCAACAGACAGCTAATGATGCAGCAGCAGAGGCCCTAA |
Protein Sequence | MGLCISMPSSSSKVNPSSETPDISMSLTLITPPNSTQTSRELSPALMSSPTSRRTVITSTGVSFRSMEDMVEEVNRQLMMQQQRP |
1 |
Soni SK, et al. Plants (Basel). 2022 Feb 22;11(5):579. doi: 10.3390/plants11050579. PMID: 35270048 |
---|---|
2 |
A molecular insight into papaya leaf curl-a severe viral disease. Varun P, et al. Protoplasma. 2017 Nov;254(6):2055-2070. doi: 10.1007/s00709-017-1126-8. Epub 2017 May 25. PMID: 28540512 |
3 |
Identification of Cotton leaf curl Gezira virus in Papaya in Oman. Khan AJ, et al. Plant Dis. 2012 Nov;96(11):1704. doi: 10.1094/PDIS-05-12-0438-PDN. PMID: 30727467 |
4 |
Hamim I, et al. Arch Virol. 2019 Jun;164(6):1661-1665. doi: 10.1007/s00705-019-04235-8. Epub 2019 Apr 4. PMID: 30949815 |
5 |
Akram A, et al. Arch Virol. 2020 Aug;165(8):1877-1881. doi: 10.1007/s00705-020-04633-3. Epub 2020 May 23. PMID: 32447620 |
6 |
First Report of Papaya leaf curl virus Infecting Papaya Plants in Taiwan. Chang LS, et al. Plant Dis. 2003 Feb;87(2):204. doi: 10.1094/PDIS.2003.87.2.204A. PMID: 30812941 |
7 |
Varun P, et al. 3 Biotech. 2018 May;8(5):243. doi: 10.1007/s13205-018-1254-7. Epub 2018 May 8. PMID: 29744275 |
8 |
Alabi OJ, et al. Plant Dis. 2017 Jul;101(7):1094-1102. doi: 10.1094/PDIS-01-17-0118-RE. Epub 2017 Apr 19. PMID: 30682949 |
9 |
Ammara UE, et al. Plant Dis. 2015 Mar;99(3):421. doi: 10.1094/PDIS-09-14-0912-PDN. PMID: 30699712 |
10 |
Cheng YH, et al. Plant Dis. 2014 Dec;98(12):1746. doi: 10.1094/PDIS-05-13-0554-PDN. PMID: 30703901 |