Andrographis yellow vein leaf curl virus


Basic Information

Genus Begomovirus
NCBI Assembly GCF_001441075.1
Isolate India: Barabanki
Release date 2015/11/7
Submitter Khan,A., Saeed,S.T., Samad,A.
Host
Vector
Download Genome |GFF3 |PEP |CDS

Genomic Organization


JBrowse


Genome

NC_028262
ACCGGATGGCCGCGCTTTTTTTTGTTAGACCCGCAAAGTCCCCACTGACAACCTCCTATAGACCAATGAGAATCGTTCCCCATAGTCTCATTGTTATGTGGTCCCCCTATAAACTTAGTGCGCAAGTTTTGCTTCGCATTCACAATGTGGGACCCACTATTGAATGAGTTTCCAGAAACCGTTCATGGGTTTCGGTGCATGTTGGCAATGAAATTTCTGAAGTTAGTAGAAGAAACGTATTCCCGTGATACATTGGGGTATGATTTAATTAGTGATTTGATATCTGTTGTTCGTGCTAGGAACTATGACGAAGCGTCCAGGAGATACCATAATTTCAATGCCCGCATCCAAGGTACGACGTCGTCTCAGCTTCGACAGCCCGTTTGCGAGCCGTGCTTATGCCCCCACTGCCCGCGCCACCAGGGAAAGGGCATGGGCGAACAGGCCCATGGTCGGAAAGCCCAAAATATACAGATTGTACAGAAGTCCAGACGTTCCGAGGGGATGTGAGGGCCCATGTAAGGTTCAGTCATTGGAGTCCAGAACTGATATTCAGCATATAGGTAAAGTCATGTGTGTCAGTGATGTTACCCGTGGTGTTGGGCTGACCCACCGAGTGGGTAAAAGGTTTTGTGTTAAATCCGTTTATGTCTTGGGTAAAATATGGATGGATGAAAATATCAAGACCAGGATTCACACTAATAGTGTGATGTTCTTCCTTGTCAGTGATAGTAAGCCTGTTGATAAGCCCCCAGATTTCGGTGAAGTTTTTAATATGTTTGACAATGAGCCCAGTACAGCTACTGTGAAGAATATGCATCGTGATAGGTACCAGGTGTTAAGGAAATGGCATGCTACGGTGACAGGTGGTCAGTATGCATCCAAGGAGCAGGCTCTGGTGAAGAAGTTTGTTAGAGTCAATAACTATGTTGTTTACAACCAGCAGGAGGCTGGCAAATATGAGAACCATAGTGAGAATGCATTAATGTTGTATATGGCATGTACCCATGCGTCTAATCCTGTGTATGCTACTCTGAAGATACGGATCTATTTTTACGATTCAGTATCAAATTAATAAAGTTTATATTTTATATCATAAGGCATTTCTACATCAATGGTGTCTTCCATTACAATTTCTAATACATGTCTAAAAGTCCTGATACAATTATTCAAACTAATGACCCCTAAATTATCTAAATATCTCAAAACTTGAGTCTTAAATACTCTTAAGAAACGCCCAGTCTGAGGATGTAAACGAGTGAAGATCCTGAAGCCCAGAAAACACTTGTGTATCCCCAGAGCCTTCCTCAGGTTGTGATTGAACTGGATCCGGATGTTGATGATGTCGTGGTTCATTAGGAATGGCCTGTTGTGGTGTTGTATTATCTTGAAATACAGGGGATTTTGAATCTCCCAGATATACGCGCCATTCTCTGCCTGAGCTGCAGTGATGGACTCCCCTGTGCGTGAATCCATGGTTGTGGCAGTTGATGTGTACGTAGTATGAGCACCCACACGGTAGATCAACCCTCTTACGCCGGATGGCTCTACGCTTAGCAGCTCTGTGTCGGACCTTGATTGGTACCTGAGTAGAGTGGGCCTTCGAGGGTGATGAAGGTGGCATTTTTTAAAGCCCAGGCTTTCAGTGCGCTATTCTTCTCTTCATCCAAGAACTCTTTATAGCTTGAATTGGGTCCTGGATTGCAGAGGAAGATAGTGGGAATGCCACCTTTAATTTGAACTGGCTTTCCGTACTTAGTGTTGCTTTGCCAGTCTCTTTGGGCCCCCATGAATTCTTTAAAGTGCTTTAGGTAGTGGGGATCTACGTCATCAATGACGTTGTACCAGGCATCATTATTGTATACCTTTGGACTAAGGTCTAGATGTCCACACAAATAATTATGTGGTCCCAATGATCTAGCCCACATCGTCTTCCCCGTTCGACTGTCACCCTCTATCACAATACTTATGGGTCTCAAAGGCCGCGCAGCGGCACTGACAACGTTCTCGGCAGCCCACTCCTCAAGTTCTTCTGGAACTTGATCAAAGGAAGAAGAAGAAAAAGGAGAAACATAAACCTCCACCGGAGGTGTAAAGATCCTATCTAAATTACATTTTAAATTATGATATTGAAAAATAAAATCTTTAGGGAGTTTTTCCCTAATTATTGCTAAAGCAGCTTCAGCCGAGCCTGCATTTAGGGCCTCTGCTGCAGCATCATCAGCTGTCTGTTGACCTCCTCGAGCAGATCTTCCATCGATCTGAAACTGACCCCAGTCGATGTAATCACCGTCCTTCTCGATGTAGGACTTGACATCAGAGCTGGACTTTGCTCCCTGGAAGTTTGGATGGAAATGAGTTGAGGTATTAGGGTGAGTTACATCGAAATGTCTGGGGTTTCTGAATTTGGATTTACCTTCGAACTGGATAAGGGCATGAAGATGCAGAGACCCATCTTCGTGTTTTTCTTGTGATATTCTGATGAATAATTTATCAGATGGACAGGTTTTGGATTTGGGTAGTTCGAGCATTTGCTCTTTTGGTAATGGACATTTCGGATAAGTGAGGAAGATATTTTTGGCCTTCACTTGGAATTGGTGTGTACGAGGCATATTGAATTGGGTGCTCTCAAAACTCTATGGAATGGGGTGCTTTGGGTACCTAATTATACCGAGTACCCAAATGGCATATTCGTAATTTCAAAATAAAATTCAAGTTCCTCACGCTCCCAAAAGCGGCCATCCGTATAATATT

Gene Information

NCBI Accession YP_009177709.1
Location 145-510
Gene Name AV2
Protein Name pre-coat protein
Coding Region ATGTGGGACCCACTATTGAATGAGTTTCCAGAAACCGTTCATGGGTTTCGGTGCATGTTGGCAATGAAATTTCTGAAGTTAGTAGAAGAAACGTATTCCCGTGATACATTGGGGTATGATTTAATTAGTGATTTGATATCTGTTGTTCGTGCTAGGAACTATGACGAAGCGTCCAGGAGATACCATAATTTCAATGCCCGCATCCAAGGTACGACGTCGTCTCAGCTTCGACAGCCCGTTTGCGAGCCGTGCTTATGCCCCCACTGCCCGCGCCACCAGGGAAAGGGCATGGGCGAACAGGCCCATGGTCGGAAAGCCCAAAATATACAGATTGTACAGAAGTCCAGACGTTCCGAGGGGATGTGA
Protein Sequence MWDPLLNEFPETVHGFRCMLAMKFLKLVEETYSRDTLGYDLISDLISVVRARNYDEASRRYHNFNARIQGTTSSQLRQPVCEPCLCPHCPRHQGKGMGEQAHGRKAQNIQIVQKSRRSEGM

NCBI Accession YP_009177710.1
Location 305-1075
Gene Name AV1
Protein Name coat protein
Coding Region ATGACGAAGCGTCCAGGAGATACCATAATTTCAATGCCCGCATCCAAGGTACGACGTCGTCTCAGCTTCGACAGCCCGTTTGCGAGCCGTGCTTATGCCCCCACTGCCCGCGCCACCAGGGAAAGGGCATGGGCGAACAGGCCCATGGTCGGAAAGCCCAAAATATACAGATTGTACAGAAGTCCAGACGTTCCGAGGGGATGTGAGGGCCCATGTAAGGTTCAGTCATTGGAGTCCAGAACTGATATTCAGCATATAGGTAAAGTCATGTGTGTCAGTGATGTTACCCGTGGTGTTGGGCTGACCCACCGAGTGGGTAAAAGGTTTTGTGTTAAATCCGTTTATGTCTTGGGTAAAATATGGATGGATGAAAATATCAAGACCAGGATTCACACTAATAGTGTGATGTTCTTCCTTGTCAGTGATAGTAAGCCTGTTGATAAGCCCCCAGATTTCGGTGAAGTTTTTAATATGTTTGACAATGAGCCCAGTACAGCTACTGTGAAGAATATGCATCGTGATAGGTACCAGGTGTTAAGGAAATGGCATGCTACGGTGACAGGTGGTCAGTATGCATCCAAGGAGCAGGCTCTGGTGAAGAAGTTTGTTAGAGTCAATAACTATGTTGTTTACAACCAGCAGGAGGCTGGCAAATATGAGAACCATAGTGAGAATGCATTAATGTTGTATATGGCATGTACCCATGCGTCTAATCCTGTGTATGCTACTCTGAAGATACGGATCTATTTTTACGATTCAGTATCAAATTAA
Protein Sequence MTKRPGDTIISMPASKVRRRLSFDSPFASRAYAPTARATRERAWANRPMVGKPKIYRLYRSPDVPRGCEGPCKVQSLESRTDIQHIGKVMCVSDVTRGVGLTHRVGKRFCVKSVYVLGKIWMDENIKTRIHTNSVMFFLVSDSKPVDKPPDFGEVFNMFDNEPSTATVKNMHRDRYQVLRKWHATVTGGQYASKEQALVKKFVRVNNYVVYNQQEAGKYENHSENALMLYMACTHASNPVYATLKIRIYFYDSVSN

NCBI Accession YP_009177711.1
Location 1072-1476
Gene Name AC3
Protein Name replication enhancer protein
Coding Region ATGGATTCACGCACAGGGGAGTCCATCACTGCAGCTCAGGCAGAGAATGGCGCGTATATCTGGGAGATTCAAAATCCCCTGTATTTCAAGATAATACAACACCACAACAGGCCATTCCTAATGAACCACGACATCATCAACATCCGGATCCAGTTCAATCACAACCTGAGGAAGGCTCTGGGGATACACAAGTGTTTTCTGGGCTTCAGGATCTTCACTCGTTTACATCCTCAGACTGGGCGTTTCTTAAGAGTATTTAAGACTCAAGTTTTGAGATATTTAGATAATTTAGGGGTCATTAGTTTGAATAATTGTATCAGGACTTTTAGACATGTATTAGAAATTGTAATGGAAGACACCATTGATGTAGAAATGCCTTATGATATAAAATATAAACTTTATTAA
Protein Sequence MDSRTGESITAAQAENGAYIWEIQNPLYFKIIQHHNRPFLMNHDIINIRIQFNHNLRKALGIHKCFLGFRIFTRLHPQTGRFLRVFKTQVLRYLDNLGVISLNNCIRTFRHVLEIVMEDTIDVEMPYDIKYKLY

NCBI Accession YP_009177712.1
Location 1217-1624
Gene Name AC2
Protein Name transcriptional activator protein
Coding Region ATGCCACCTTCATCACCCTCGAAGGCCCACTCTACTCAGGTACCAATCAAGGTCCGACACAGAGCTGCTAAGCGTAGAGCCATCCGGCGTAAGAGGGTTGATCTACCGTGTGGGTGCTCATACTACGTACACATCAACTGCCACAACCATGGATTCACGCACAGGGGAGTCCATCACTGCAGCTCAGGCAGAGAATGGCGCGTATATCTGGGAGATTCAAAATCCCCTGTATTTCAAGATAATACAACACCACAACAGGCCATTCCTAATGAACCACGACATCATCAACATCCGGATCCAGTTCAATCACAACCTGAGGAAGGCTCTGGGGATACACAAGTGTTTTCTGGGCTTCAGGATCTTCACTCGTTTACATCCTCAGACTGGGCGTTTCTTAAGAGTATTTAA
Protein Sequence MPPSSPSKAHSTQVPIKVRHRAAKRRAIRRKRVDLPCGCSYYVHINCHNHGFTHRGVHHCSSGREWRVYLGDSKSPVFQDNTTPQQAIPNEPRHHQHPDPVQSQPEEGSGDTQVFSGLQDLHSFTSSDWAFLKSI

NCBI Accession YP_009177713.1
Location 1554-2612
Gene Name AC1
Protein Name replication associated protein
Coding Region ATGCCTCGTACACACCAATTCCAAGTGAAGGCCAAAAATATCTTCCTCACTTATCCGAAATGTCCATTACCAAAAGAGCAAATGCTCGAACTACCCAAATCCAAAACCTGTCCATCTGATAAATTATTCATCAGAATATCACAAGAAAAACACGAAGATGGGTCTCTGCATCTTCATGCCCTTATCCAGTTCGAAGGTAAATCCAAATTCAGAAACCCCAGACATTTCGATGTAACTCACCCTAATACCTCAACTCATTTCCATCCAAACTTCCAGGGAGCAAAGTCCAGCTCTGATGTCAAGTCCTACATCGAGAAGGACGGTGATTACATCGACTGGGGTCAGTTTCAGATCGATGGAAGATCTGCTCGAGGAGGTCAACAGACAGCTGATGATGCTGCAGCAGAGGCCCTAAATGCAGGCTCGGCTGAAGCTGCTTTAGCAATAATTAGGGAAAAACTCCCTAAAGATTTTATTTTTCAATATCATAATTTAAAATGTAATTTAGATAGGATCTTTACACCTCCGGTGGAGGTTTATGTTTCTCCTTTTTCTTCTTCTTCCTTTGATCAAGTTCCAGAAGAACTTGAGGAGTGGGCTGCCGAGAACGTTGTCAGTGCCGCTGCGCGGCCTTTGAGACCCATAAGTATTGTGATAGAGGGTGACAGTCGAACGGGGAAGACGATGTGGGCTAGATCATTGGGACCACATAATTATTTGTGTGGACATCTAGACCTTAGTCCAAAGGTATACAATAATGATGCCTGGTACAACGTCATTGATGACGTAGATCCCCACTACCTAAAGCACTTTAAAGAATTCATGGGGGCCCAAAGAGACTGGCAAAGCAACACTAAGTACGGAAAGCCAGTTCAAATTAAAGGTGGCATTCCCACTATCTTCCTCTGCAATCCAGGACCCAATTCAAGCTATAAAGAGTTCTTGGATGAAGAGAAGAATAGCGCACTGAAAGCCTGGGCTTTAAAAAATGCCACCTTCATCACCCTCGAAGGCCCACTCTACTCAGGTACCAATCAAGGTCCGACACAGAGCTGCTAA
Protein Sequence MPRTHQFQVKAKNIFLTYPKCPLPKEQMLELPKSKTCPSDKLFIRISQEKHEDGSLHLHALIQFEGKSKFRNPRHFDVTHPNTSTHFHPNFQGAKSSSDVKSYIEKDGDYIDWGQFQIDGRSARGGQQTADDAAAEALNAGSAEAALAIIREKLPKDFIFQYHNLKCNLDRIFTPPVEVYVSPFSSSSFDQVPEELEEWAAENVVSAAARPLRPISIVIEGDSRTGKTMWARSLGPHNYLCGHLDLSPKVYNNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLDEEKNSALKAWALKNATFITLEGPLYSGTNQGPTQSC

References More References in PubMed

1

A New Isolate of Eclipta yellow vein virus Along with a Betasatellite Associated with Yellow Vein Leaf Curl Disease of Andrographis paniculata in India.

Khan A, et al.  Plant Dis. 2014 May;98(5):698. doi: 10.1094/PDIS-08-13-0848-PDN.

PMID: 30708521

2

New Record of Catharanthus yellow mosaic virus and a Betasatellite Associated with Lethal Leaf Yellowing of Kalmegh (Andrographis paniculata) in Northern India.

Khan A, et al.  Plant Dis. 2015 Feb;99(2):292. doi: 10.1094/PDIS-08-14-0862-PDN.

PMID: 30699593