Papaya leaf curl China virus
Basic Information
| Genus | Begomovirus |
|---|---|
| NCBI Assembly | GCF_000846865.1 |
| Isolate | China:Guangxi |
| Release date | 2015/2/12 |
| Submitter | Wang,X., Xie,Y., Zhou,X. |
| Host | |
| Download | Genome |GFF3 |PEP |CDS |
Genomic Organization
JBrowse
Genome
NC_005321
ACCGGATGGCCGCGATTTTTTTTAAAGTGGTCCCCGCATGCGCTGGTGTCCAATCCTATCCGCTCCTCAAAGCTTAATTATTAAGTGGTCCCCTATATAACTTGGTCCCCAAGTACTAAAGCTAAACATGTGGGATCCTTTACTAAACGAGTTTCCCGAGACCGTACATGGTTTCAGGTGTATGCTAGCAATTAAGTATTTGCAACTGGTAGAAAATACGTACTCTCCAGATACATTAGGGCACGACTTAATTCGTGATTTAATTTCAGTTATTCGTGCTAGAGATTATGTCGAAGCGACCCGCCGATATAGTCATTTCCACACCCGCATCCAAGGTGCGTCGCCGGCTGAATTTCGACAGCCCGTATGTCAGCCGTGCTGCTGCCCCCACTGTCCTCGTCACAAACAAAAGGAGGTCATGGGTGAATCGGCCCATGTACCGAAAGCCCAGGATGTACAGGATGTACAAAAGCCCTGATGTGCCTCGTGGTTGTGAGGGTCCATGTAAGGTCCAGTCGTATGAACAGCGTCATGATGTAGCACACGTAGGTAAGGTAATTTGTGTGTCGGATGTTACCCGTGGTAATGGTTTGACTCATCGAGTCGGGAAGAGGTTTTGTGTTAAATCAGTCTATGTTTTGGGCAAGATATGGATGGATGAGAACATTAAGACCAAGAATCATACCAACACAGTCATGTTTTTTCTAGTTCGTGATAGGAGACCATTTGGCACTCCACAGGATTTTGGCCAGGTGTTTAACATGTATGATAATGAGCCTAGCACTGCTACTGTGAAGAACGACAACAGGGATCGCTTTCAAGTTCTACGGCGTTTTCAGGCGACTGTTACGGGTGGTCAGTATGCAAGTAAGGAGCAAGCAATAGTTAGGAAATTTATGAAGGTTAACAACCATGTGACTTATAACCATCAAGAGGCTGCGAAGTATGATAACCACACAGAGAATGCTTTGTTATTGTATATGGCATGTACTCATGCTAGTAATCCAGTGTATGCTACTTTGAAGATCAGGATCTATTTCTATGATTCTGTTCAGAATTAATAAAGATTGAATTTTATTATATGAGAATGTGTTACATATTCTGTTTTCTCCAATACATCCCATAATACATGATTACATGCTCTAATTACATTGTTAATACTAATTACACCCATATTATCTAAATATTTCATACATTGAACCCTAAATACTCTTAAGAAACGCCAAGTCTGAGGTTGTAAGCGAGTCCAGATCTGGAAGATCAGAAAACACTGGTGTATTCCCAATGCTTTCCTCAGGTTGTGGTTGAATTGTATTTGGATCGTTATGATGYCGTGGTTGGTGTTGAATGGTCTCTCGTGGTGCTTGGTTATCTTGAAATATAGGGGATTTTTGATCGTCCAGGTATACACGCCACTCTCGCATTGAGTTGCAGTGAGTAATTCCCCTGTGCGAAAATCCATGATTTGCACAATCTATGCCGAAGTAGTATGAGCACCCGCACGTTAGATCAACTCTCCGTCTCCGAATGGGCCTCCTCTTGGCTATTCTGTGTTGCACTTTGATTGGTACCTGAGTACAATGGGCTGTTGAGGGTGATGAATTCCGCATTCTTTAATGCCCAATCTTTTAATGCTGAATTTTTATCCTCATTCAAGTACTCTTTATATGATGATGTTGGGCCTGGATTGCATAGGAAGATAGTTGGGATTCCACCTTTAATTTGAATGGCTTTCCCGTACTTAGTGTTGCTTTGCCAGTCCCTTTGGGCCCCCATGAATTCTTTAAAGTGCTTTAGATAGTGGGGGTCTACGTCATCAATGACGTTATACCAAGCATCATTACTGTATACTTTTGGGCTTAGATCAAGATGTCCACACAAATAATTGTGTGGTCCCAGTGATCTGGCCCACATTGTTTTACCCGTACGACTATCACCTTCTATCACAATACTCTTGGGTCTCCACGGCCGCGCAGCGGCACCACTCACGTTCTCAGAAACCCACTCTTCAAGTTCTTCTGGAACTTGATCGAATGAAGAAGAAAGAAAAGGACAAACAAAAACCTCTATAGGAGGTGCAAAAATCCTATCTAAATTACTATTTAAATTATGAAACTGTAAAACGAAATCTTTAGGAGCCTTCTCCTTTAATATATTGAGGGCCGCTGGTTTGGACCTTGCATTGATTGCCTCGGCATATGCGTCGTTGGCAGATTGGCAACCTCCTCTAGCTGATCTTCCATCGATTTGGAAAACTCCATGATCAAGCACGTCTCCGTCTTTTTCCATGTATGCTTTAACATCTGTTGAGGTTTTAGCTCCCTGAATGTTCGGATGGAAATGTGCTGACCTGCTTGGGGAGGTGAGATCGAAGAATCTGTTGTTTTGGCACTTGAATTTGCCTCCGAACTGTATGAGGACATGCAGGTGAGGAGACCCATCTCCGTGTAGTTCCCTGCAAATACGTATGAATAATTTATTAGTCGGGGTTGATAAGGCTGAGATTTGGGAAAATGCCTCTTCTTTAGTAAGGGAGCAGTGTGGATAAGTGAGGGAATAATTCTTGGCATTTATTAAAAATTTTTTTGGCTGAGGCATATTGACTGGTCAATCGGGTCCTCTCAAACTTGGCTATGCAATCGGGGAATGGGTCCTTATTTATAGTTCAGGACCTAAATGGCATTATTGTAATTCCCAAAAGAAATTCAAAATTTGAATTTTGAATCCAAAAGCGGCCATCCGTATAATATT
Gene Information
| NCBI Accession | NP_955743.1 |
|---|---|
| Location | 128-478 |
| Gene Name | AV2 |
| Protein Name | AV2 protein |
| Coding Region | ATGTGGGATCCTTTACTAAACGAGTTTCCCGAGACCGTACATGGTTTCAGGTGTATGCTAGCAATTAAGTATTTGCAACTGGTAGAAAATACGTACTCTCCAGATACATTAGGGCACGACTTAATTCGTGATTTAATTTCAGTTATTCGTGCTAGAGATTATGTCGAAGCGACCCGCCGATATAGTCATTTCCACACCCGCATCCAAGGTGCGTCGCCGGCTGAATTTCGACAGCCCGTATGTCAGCCGTGCTGCTGCCCCCACTGTCCTCGTCACAAACAAAAGGAGGTCATGGGTGAATCGGCCCATGTACCGAAAGCCCAGGATGTACAGGATGTACAAAAGCCCTGA |
| Protein Sequence | MWDPLLNEFPETVHGFRCMLAIKYLQLVENTYSPDTLGHDLIRDLISVIRARDYVEATRRYSHFHTRIQGASPAEFRQPVCQPCCCPHCPRHKQKEVMGESAHVPKAQDVQDVQKP |
| NCBI Accession | NP_955744.1 |
|---|---|
| Location | 288-1061 |
| Gene Name | AV1 |
| Protein Name | AV1 protein |
| Coding Region | ATGTCGAAGCGACCCGCCGATATAGTCATTTCCACACCCGCATCCAAGGTGCGTCGCCGGCTGAATTTCGACAGCCCGTATGTCAGCCGTGCTGCTGCCCCCACTGTCCTCGTCACAAACAAAAGGAGGTCATGGGTGAATCGGCCCATGTACCGAAAGCCCAGGATGTACAGGATGTACAAAAGCCCTGATGTGCCTCGTGGTTGTGAGGGTCCATGTAAGGTCCAGTCGTATGAACAGCGTCATGATGTAGCACACGTAGGTAAGGTAATTTGTGTGTCGGATGTTACCCGTGGTAATGGTTTGACTCATCGAGTCGGGAAGAGGTTTTGTGTTAAATCAGTCTATGTTTTGGGCAAGATATGGATGGATGAGAACATTAAGACCAAGAATCATACCAACACAGTCATGTTTTTTCTAGTTCGTGATAGGAGACCATTTGGCACTCCACAGGATTTTGGCCAGGTGTTTAACATGTATGATAATGAGCCTAGCACTGCTACTGTGAAGAACGACAACAGGGATCGCTTTCAAGTTCTACGGCGTTTTCAGGCGACTGTTACGGGTGGTCAGTATGCAAGTAAGGAGCAAGCAATAGTTAGGAAATTTATGAAGGTTAACAACCATGTGACTTATAACCATCAAGAGGCTGCGAAGTATGATAACCACACAGAGAATGCTTTGTTATTGTATATGGCATGTACTCATGCTAGTAATCCAGTGTATGCTACTTTGAAGATCAGGATCTATTTCTATGATTCTGTTCAGAATTAA |
| Protein Sequence | MSKRPADIVISTPASKVRRRLNFDSPYVSRAAAPTVLVTNKRRSWVNRPMYRKPRMYRMYKSPDVPRGCEGPCKVQSYEQRHDVAHVGKVICVSDVTRGNGLTHRVGKRFCVKSVYVLGKIWMDENIKTKNHTNTVMFFLVRDRRPFGTPQDFGQVFNMYDNEPSTATVKNDNRDRFQVLRRFQATVTGGQYASKEQAIVRKFMKVNNHVTYNHQEAAKYDNHTENALLLYMACTHASNPVYATLKIRIYFYDSVQN |
| NCBI Accession | NP_955745.1 |
|---|---|
| Location | 1058-1462 |
| Gene Name | AC3 |
| Protein Name | AC3 protein |
| Coding Region | ATGGATTTTCGCACAGGGGAATTACTCACTGCAACTCAATGCGAGAGTGGCGTGTATACCTGGACGATCAAAAATCCCCTATATTTCAAGATAACCAAGCACCACGAGAGACCATTCAACACCAACCACGRCATCATAACGATCCAAATACAATTCAACCACAACCTGAGGAAAGCATTGGGAATACACCAGTGTTTTCTGATCTTCCAGATCTGGACTCGCTTACAACCTCAGACTTGGCGTTTCTTAAGAGTATTTAGGGTTCAATGTATGAAATATTTAGATAATATGGGTGTAATTAGTATTAACAATGTAATTAGAGCATGTAATCATGTATTATGGGATGTATTGGAGAAAACAGAATATGTAACACATTCTCATATAATAAAATTCAATCTTTATTAA |
| Protein Sequence | MDFRTGELLTATQCESGVYTWTIKNPLYFKITKHHERPFNTNHXIITIQIQFNHNLRKALGIHQCFLIFQIWTRLQPQTWRFLRVFRVQCMKYLDNMGVISINNVIRACNHVLWDVLEKTEYVTHSHIIKFNLY |
| NCBI Accession | NP_955746.1 |
|---|---|
| Location | 1203-1610 |
| Gene Name | AC2 |
| Protein Name | AC2 protein |
| Coding Region | ATGCGGAATTCATCACCCTCAACAGCCCATTGTACTCAGGTACCAATCAAAGTGCAACACAGAATAGCCAAGAGGAGGCCCATTCGGAGACGGAGAGTTGATCTAACGTGCGGGTGCTCATACTACTTCGGCATAGATTGTGCAAATCATGGATTTTCGCACAGGGGAATTACTCACTGCAACTCAATGCGAGAGTGGCGTGTATACCTGGACGATCAAAAATCCCCTATATTTCAAGATAACCAAGCACCACGAGAGACCATTCAACACCAACCACGRCATCATAACGATCCAAATACAATTCAACCACAACCTGAGGAAAGCATTGGGAATACACCAGTGTTTTCTGATCTTCCAGATCTGGACTCGCTTACAACCTCAGACTTGGCGTTTCTTAAGAGTATTTAG |
| Protein Sequence | MRNSSPSTAHCTQVPIKVQHRIAKRRPIRRRRVDLTCGCSYYFGIDCANHGFSHRGITHCNSMREWRVYLDDQKSPIFQDNQAPRETIQHQPRHHNDPNTIQPQPEESIGNTPVFSDLPDLDSLTTSDLAFLKSI |
| NCBI Accession | NP_955747.1 |
|---|---|
| Location | 1510-2598 |
| Gene Name | AC1 |
| Protein Name | AC1 protein |
| Coding Region | ATGCCTCAGCCAAAAAAATTTTTAATAAATGCCAAGAATTATTCCCTCACTTATCCACACTGCTCCCTTACTAAAGAAGAGGCATTTTCCCAAATCTCAGCCTTATCAACCCCGACTAATAAATTATTCATACGTATTTGCAGGGAACTACACGGAGATGGGTCTCCTCACCTGCATGTCCTCATACAGTTCGGAGGCAAATTCAAGTGCCAAAACAACAGATTCTTCGATCTCACCTCCCCAAGCAGGTCAGCACATTTCCATCCGAACATTCAGGGAGCTAAAACCTCAACAGATGTTAAAGCATACATGGAAAAAGACGGAGACGTGCTTGATCATGGAGTTTTCCAAATCGATGGAAGATCAGCTAGAGGAGGTTGCCAATCTGCCAACGACGCATATGCCGAGGCAATCAATGCAAGGTCCAAACCAGCGGCCCTCAATATATTAAAGGAGAAGGCTCCTAAAGATTTCGTTTTACAGTTTCATAATTTAAATAGTAATTTAGATAGGATTTTTGCACCTCCTATAGAGGTTTTTGTTTGTCCTTTTCTTTCTTCTTCATTCGATCAAGTTCCAGAAGAACTTGAAGAGTGGGTTTCTGAGAACGTGAGTGGTGCCGCTGCGCGGCCGTGGAGACCCAAGAGTATTGTGATAGAAGGTGATAGTCGTACGGGTAAAACAATGTGGGCCAGATCACTGGGACCACACAATTATTTGTGTGGACATCTTGATCTAAGCCCAAAAGTATACAGTAATGATGCTTGGTATAACGTCATTGATGACGTAGACCCCCACTATCTAAAGCACTTTAAAGAATTCATGGGGGCCCAAAGGGACTGGCAAAGCAACACTAAGTACGGGAAAGCCATTCAAATTAAAGGTGGAATCCCAACTATCTTCCTATGCAATCCAGGCCCAACATCATCATATAAAGAGTACTTGAATGAGGATAAAAATTCAGCATTAAAAGATTGGGCATTAAAGAATGCGGAATTCATCACCCTCAACAGCCCATTGTACTCAGGTACCAATCAAAGTGCAACACAGAATAGCCAAGAGGAGGCCCATTCGGAGACGGAGAGTTGA |
| Protein Sequence | MPQPKKFLINAKNYSLTYPHCSLTKEEAFSQISALSTPTNKLFIRICRELHGDGSPHLHVLIQFGGKFKCQNNRFFDLTSPSRSAHFHPNIQGAKTSTDVKAYMEKDGDVLDHGVFQIDGRSARGGCQSANDAYAEAINARSKPAALNILKEKAPKDFVLQFHNLNSNLDRIFAPPIEVFVCPFLSSSFDQVPEELEEWVSENVSGAAARPWRPKSIVIEGDSRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQSNTKYGKAIQIKGGIPTIFLCNPGPTSSYKEYLNEDKNSALKDWALKNAEFITLNSPLYSGTNQSATQNSQEEAHSETES |
| NCBI Accession | NP_955748.1 |
|---|---|
| Location | 2148-2441 |
| Gene Name | AC4 |
| Protein Name | AC4 protein |
| Coding Region | ATGGGTCTCCTCACCTGCATGTCCTCATACAGTTCGGAGGCAAATTCAAGTGCCAAAACAACAGATTCTTCGATCTCACCTCCCCAAGCAGGTCAGCACATTTCCATCCGAACATTCAGGGAGCTAAAACCTCAACAGATGTTAAAGCATACATGGAAAAAGACGGAGACGTGCTTGATCATGGAGTTTTCCAAATCGATGGAAGATCAGCTAGAGGAGGTTGCCAATCTGCCAACGACGCATATGCCGAGGCAATCAATGCAAGGTCCAAACCAGCGGCCCTCAATATATTAA |
| Protein Sequence | MGLLTCMSSYSSEANSSAKTTDSSISPPQAGQHISIRTFRELKPQQMLKHTWKKTETCLIMEFSKSMEDQLEEVANLPTTHMPRQSMQGPNQRPSIY |
References More References in PubMed
| 1 |
Zhang L, et al. Plant Pathol J. 2024 Oct;40(5):551-558. doi: 10.5423/PPJ.NT.04.2024.0066. Epub 2024 Oct 1. PMID: 39397308 |
|---|---|
| 2 |
Molecular identification of tobacco leaf curl disease in Sichuan province of China. Jing C, et al. Virol J. 2016 Jan 6;13:4. doi: 10.1186/s12985-015-0461-7. PMID: 26738931 |
| 3 |
Zhang H, et al. J Zhejiang Univ Sci B. 2010 Feb;11(2):109-14. doi: 10.1631/jzus.B0900176. PMID: 20104645 |
| 4 |
Guo T, et al. Sci Rep. 2015 Oct 21;5:15432. doi: 10.1038/srep15432. PMID: 26486606 |
| 5 |
Global scenario of viruses infecting papaya. Nivetha T, et al. 3 Biotech. 2025 Jul;15(7):208. doi: 10.1007/s13205-025-04370-x. Epub 2025 Jun 11. PMID: 40521212 |
| 6 |
Swapna Geetanjali A, et al. Virus Genes. 2013 Aug;47(1):184-8. doi: 10.1007/s11262-013-0901-7. Epub 2013 Mar 26. PMID: 23529301 |
| 7 |
[Molecular characteristics of DNA-A of tomato leaf curl Guangdong virus isolate G2]. He ZF, et al. Wei Sheng Wu Xue Bao. 2005 Feb;45(1):48-52. PMID: 15847162 |
| 8 |
Vector development and vitellogenin determine the transovarial transmission of begomoviruses. Wei J, et al. Proc Natl Acad Sci U S A. 2017 Jun 27;114(26):6746-6751. doi: 10.1073/pnas.1701720114. Epub 2017 Jun 12. PMID: 28607073 |
| 9 |
Molecular characterization of two distinct begomoviruses from Papaya in China. Wang X, et al. Virus Genes. 2004 Dec;29(3):303-9. doi: 10.1007/s11262-004-7432-1. PMID: 15550769 |
| 10 |
He YZ, et al. Proc Natl Acad Sci U S A. 2020 Jul 21;117(29):16928-16937. doi: 10.1073/pnas.1820132117. Epub 2020 Jul 7. PMID: 32636269 |