Papaya leaf curl China virus
Basic Information
| Genus | Begomovirus |
|---|---|
| NCBI Assembly | GCF_000846865.1 |
| Isolate | China:Guangxi |
| Release date | 2015/2/12 |
| Submitter | Wang,X., Xie,Y., Zhou,X. |
| Host | |
| Download | Genome |GFF3 |PEP |CDS |
Genomic Organization
JBrowse
Genome
NC_005321
ACCGGATGGCCGCGATTTTTTTTAAAGTGGTCCCCGCATGCGCTGGTGTCCAATCCTATCCGCTCCTCAAAGCTTAATTATTAAGTGGTCCCCTATATAACTTGGTCCCCAAGTACTAAAGCTAAACATGTGGGATCCTTTACTAAACGAGTTTCCCGAGACCGTACATGGTTTCAGGTGTATGCTAGCAATTAAGTATTTGCAACTGGTAGAAAATACGTACTCTCCAGATACATTAGGGCACGACTTAATTCGTGATTTAATTTCAGTTATTCGTGCTAGAGATTATGTCGAAGCGACCCGCCGATATAGTCATTTCCACACCCGCATCCAAGGTGCGTCGCCGGCTGAATTTCGACAGCCCGTATGTCAGCCGTGCTGCTGCCCCCACTGTCCTCGTCACAAACAAAAGGAGGTCATGGGTGAATCGGCCCATGTACCGAAAGCCCAGGATGTACAGGATGTACAAAAGCCCTGATGTGCCTCGTGGTTGTGAGGGTCCATGTAAGGTCCAGTCGTATGAACAGCGTCATGATGTAGCACACGTAGGTAAGGTAATTTGTGTGTCGGATGTTACCCGTGGTAATGGTTTGACTCATCGAGTCGGGAAGAGGTTTTGTGTTAAATCAGTCTATGTTTTGGGCAAGATATGGATGGATGAGAACATTAAGACCAAGAATCATACCAACACAGTCATGTTTTTTCTAGTTCGTGATAGGAGACCATTTGGCACTCCACAGGATTTTGGCCAGGTGTTTAACATGTATGATAATGAGCCTAGCACTGCTACTGTGAAGAACGACAACAGGGATCGCTTTCAAGTTCTACGGCGTTTTCAGGCGACTGTTACGGGTGGTCAGTATGCAAGTAAGGAGCAAGCAATAGTTAGGAAATTTATGAAGGTTAACAACCATGTGACTTATAACCATCAAGAGGCTGCGAAGTATGATAACCACACAGAGAATGCTTTGTTATTGTATATGGCATGTACTCATGCTAGTAATCCAGTGTATGCTACTTTGAAGATCAGGATCTATTTCTATGATTCTGTTCAGAATTAATAAAGATTGAATTTTATTATATGAGAATGTGTTACATATTCTGTTTTCTCCAATACATCCCATAATACATGATTACATGCTCTAATTACATTGTTAATACTAATTACACCCATATTATCTAAATATTTCATACATTGAACCCTAAATACTCTTAAGAAACGCCAAGTCTGAGGTTGTAAGCGAGTCCAGATCTGGAAGATCAGAAAACACTGGTGTATTCCCAATGCTTTCCTCAGGTTGTGGTTGAATTGTATTTGGATCGTTATGATGYCGTGGTTGGTGTTGAATGGTCTCTCGTGGTGCTTGGTTATCTTGAAATATAGGGGATTTTTGATCGTCCAGGTATACACGCCACTCTCGCATTGAGTTGCAGTGAGTAATTCCCCTGTGCGAAAATCCATGATTTGCACAATCTATGCCGAAGTAGTATGAGCACCCGCACGTTAGATCAACTCTCCGTCTCCGAATGGGCCTCCTCTTGGCTATTCTGTGTTGCACTTTGATTGGTACCTGAGTACAATGGGCTGTTGAGGGTGATGAATTCCGCATTCTTTAATGCCCAATCTTTTAATGCTGAATTTTTATCCTCATTCAAGTACTCTTTATATGATGATGTTGGGCCTGGATTGCATAGGAAGATAGTTGGGATTCCACCTTTAATTTGAATGGCTTTCCCGTACTTAGTGTTGCTTTGCCAGTCCCTTTGGGCCCCCATGAATTCTTTAAAGTGCTTTAGATAGTGGGGGTCTACGTCATCAATGACGTTATACCAAGCATCATTACTGTATACTTTTGGGCTTAGATCAAGATGTCCACACAAATAATTGTGTGGTCCCAGTGATCTGGCCCACATTGTTTTACCCGTACGACTATCACCTTCTATCACAATACTCTTGGGTCTCCACGGCCGCGCAGCGGCACCACTCACGTTCTCAGAAACCCACTCTTCAAGTTCTTCTGGAACTTGATCGAATGAAGAAGAAAGAAAAGGACAAACAAAAACCTCTATAGGAGGTGCAAAAATCCTATCTAAATTACTATTTAAATTATGAAACTGTAAAACGAAATCTTTAGGAGCCTTCTCCTTTAATATATTGAGGGCCGCTGGTTTGGACCTTGCATTGATTGCCTCGGCATATGCGTCGTTGGCAGATTGGCAACCTCCTCTAGCTGATCTTCCATCGATTTGGAAAACTCCATGATCAAGCACGTCTCCGTCTTTTTCCATGTATGCTTTAACATCTGTTGAGGTTTTAGCTCCCTGAATGTTCGGATGGAAATGTGCTGACCTGCTTGGGGAGGTGAGATCGAAGAATCTGTTGTTTTGGCACTTGAATTTGCCTCCGAACTGTATGAGGACATGCAGGTGAGGAGACCCATCTCCGTGTAGTTCCCTGCAAATACGTATGAATAATTTATTAGTCGGGGTTGATAAGGCTGAGATTTGGGAAAATGCCTCTTCTTTAGTAAGGGAGCAGTGTGGATAAGTGAGGGAATAATTCTTGGCATTTATTAAAAATTTTTTTGGCTGAGGCATATTGACTGGTCAATCGGGTCCTCTCAAACTTGGCTATGCAATCGGGGAATGGGTCCTTATTTATAGTTCAGGACCTAAATGGCATTATTGTAATTCCCAAAAGAAATTCAAAATTTGAATTTTGAATCCAAAAGCGGCCATCCGTATAATATT
Gene Information
| NCBI Accession | NP_955743.1 |
|---|---|
| Location | 128-478 |
| Gene Name | AV2 |
| Protein Name | AV2 protein |
| Coding Region | ATGTGGGATCCTTTACTAAACGAGTTTCCCGAGACCGTACATGGTTTCAGGTGTATGCTAGCAATTAAGTATTTGCAACTGGTAGAAAATACGTACTCTCCAGATACATTAGGGCACGACTTAATTCGTGATTTAATTTCAGTTATTCGTGCTAGAGATTATGTCGAAGCGACCCGCCGATATAGTCATTTCCACACCCGCATCCAAGGTGCGTCGCCGGCTGAATTTCGACAGCCCGTATGTCAGCCGTGCTGCTGCCCCCACTGTCCTCGTCACAAACAAAAGGAGGTCATGGGTGAATCGGCCCATGTACCGAAAGCCCAGGATGTACAGGATGTACAAAAGCCCTGA |
| Protein Sequence | MWDPLLNEFPETVHGFRCMLAIKYLQLVENTYSPDTLGHDLIRDLISVIRARDYVEATRRYSHFHTRIQGASPAEFRQPVCQPCCCPHCPRHKQKEVMGESAHVPKAQDVQDVQKP |
| NCBI Accession | NP_955744.1 |
|---|---|
| Location | 288-1061 |
| Gene Name | AV1 |
| Protein Name | AV1 protein |
| Coding Region | ATGTCGAAGCGACCCGCCGATATAGTCATTTCCACACCCGCATCCAAGGTGCGTCGCCGGCTGAATTTCGACAGCCCGTATGTCAGCCGTGCTGCTGCCCCCACTGTCCTCGTCACAAACAAAAGGAGGTCATGGGTGAATCGGCCCATGTACCGAAAGCCCAGGATGTACAGGATGTACAAAAGCCCTGATGTGCCTCGTGGTTGTGAGGGTCCATGTAAGGTCCAGTCGTATGAACAGCGTCATGATGTAGCACACGTAGGTAAGGTAATTTGTGTGTCGGATGTTACCCGTGGTAATGGTTTGACTCATCGAGTCGGGAAGAGGTTTTGTGTTAAATCAGTCTATGTTTTGGGCAAGATATGGATGGATGAGAACATTAAGACCAAGAATCATACCAACACAGTCATGTTTTTTCTAGTTCGTGATAGGAGACCATTTGGCACTCCACAGGATTTTGGCCAGGTGTTTAACATGTATGATAATGAGCCTAGCACTGCTACTGTGAAGAACGACAACAGGGATCGCTTTCAAGTTCTACGGCGTTTTCAGGCGACTGTTACGGGTGGTCAGTATGCAAGTAAGGAGCAAGCAATAGTTAGGAAATTTATGAAGGTTAACAACCATGTGACTTATAACCATCAAGAGGCTGCGAAGTATGATAACCACACAGAGAATGCTTTGTTATTGTATATGGCATGTACTCATGCTAGTAATCCAGTGTATGCTACTTTGAAGATCAGGATCTATTTCTATGATTCTGTTCAGAATTAA |
| Protein Sequence | MSKRPADIVISTPASKVRRRLNFDSPYVSRAAAPTVLVTNKRRSWVNRPMYRKPRMYRMYKSPDVPRGCEGPCKVQSYEQRHDVAHVGKVICVSDVTRGNGLTHRVGKRFCVKSVYVLGKIWMDENIKTKNHTNTVMFFLVRDRRPFGTPQDFGQVFNMYDNEPSTATVKNDNRDRFQVLRRFQATVTGGQYASKEQAIVRKFMKVNNHVTYNHQEAAKYDNHTENALLLYMACTHASNPVYATLKIRIYFYDSVQN |
| NCBI Accession | NP_955745.1 |
|---|---|
| Location | 1058-1462 |
| Gene Name | AC3 |
| Protein Name | AC3 protein |
| Coding Region | ATGGATTTTCGCACAGGGGAATTACTCACTGCAACTCAATGCGAGAGTGGCGTGTATACCTGGACGATCAAAAATCCCCTATATTTCAAGATAACCAAGCACCACGAGAGACCATTCAACACCAACCACGRCATCATAACGATCCAAATACAATTCAACCACAACCTGAGGAAAGCATTGGGAATACACCAGTGTTTTCTGATCTTCCAGATCTGGACTCGCTTACAACCTCAGACTTGGCGTTTCTTAAGAGTATTTAGGGTTCAATGTATGAAATATTTAGATAATATGGGTGTAATTAGTATTAACAATGTAATTAGAGCATGTAATCATGTATTATGGGATGTATTGGAGAAAACAGAATATGTAACACATTCTCATATAATAAAATTCAATCTTTATTAA |
| Protein Sequence | MDFRTGELLTATQCESGVYTWTIKNPLYFKITKHHERPFNTNHXIITIQIQFNHNLRKALGIHQCFLIFQIWTRLQPQTWRFLRVFRVQCMKYLDNMGVISINNVIRACNHVLWDVLEKTEYVTHSHIIKFNLY |
| NCBI Accession | NP_955746.1 |
|---|---|
| Location | 1203-1610 |
| Gene Name | AC2 |
| Protein Name | AC2 protein |
| Coding Region | ATGCGGAATTCATCACCCTCAACAGCCCATTGTACTCAGGTACCAATCAAAGTGCAACACAGAATAGCCAAGAGGAGGCCCATTCGGAGACGGAGAGTTGATCTAACGTGCGGGTGCTCATACTACTTCGGCATAGATTGTGCAAATCATGGATTTTCGCACAGGGGAATTACTCACTGCAACTCAATGCGAGAGTGGCGTGTATACCTGGACGATCAAAAATCCCCTATATTTCAAGATAACCAAGCACCACGAGAGACCATTCAACACCAACCACGRCATCATAACGATCCAAATACAATTCAACCACAACCTGAGGAAAGCATTGGGAATACACCAGTGTTTTCTGATCTTCCAGATCTGGACTCGCTTACAACCTCAGACTTGGCGTTTCTTAAGAGTATTTAG |
| Protein Sequence | MRNSSPSTAHCTQVPIKVQHRIAKRRPIRRRRVDLTCGCSYYFGIDCANHGFSHRGITHCNSMREWRVYLDDQKSPIFQDNQAPRETIQHQPRHHNDPNTIQPQPEESIGNTPVFSDLPDLDSLTTSDLAFLKSI |
| NCBI Accession | NP_955747.1 |
|---|---|
| Location | 1510-2598 |
| Gene Name | AC1 |
| Protein Name | AC1 protein |
| Coding Region | ATGCCTCAGCCAAAAAAATTTTTAATAAATGCCAAGAATTATTCCCTCACTTATCCACACTGCTCCCTTACTAAAGAAGAGGCATTTTCCCAAATCTCAGCCTTATCAACCCCGACTAATAAATTATTCATACGTATTTGCAGGGAACTACACGGAGATGGGTCTCCTCACCTGCATGTCCTCATACAGTTCGGAGGCAAATTCAAGTGCCAAAACAACAGATTCTTCGATCTCACCTCCCCAAGCAGGTCAGCACATTTCCATCCGAACATTCAGGGAGCTAAAACCTCAACAGATGTTAAAGCATACATGGAAAAAGACGGAGACGTGCTTGATCATGGAGTTTTCCAAATCGATGGAAGATCAGCTAGAGGAGGTTGCCAATCTGCCAACGACGCATATGCCGAGGCAATCAATGCAAGGTCCAAACCAGCGGCCCTCAATATATTAAAGGAGAAGGCTCCTAAAGATTTCGTTTTACAGTTTCATAATTTAAATAGTAATTTAGATAGGATTTTTGCACCTCCTATAGAGGTTTTTGTTTGTCCTTTTCTTTCTTCTTCATTCGATCAAGTTCCAGAAGAACTTGAAGAGTGGGTTTCTGAGAACGTGAGTGGTGCCGCTGCGCGGCCGTGGAGACCCAAGAGTATTGTGATAGAAGGTGATAGTCGTACGGGTAAAACAATGTGGGCCAGATCACTGGGACCACACAATTATTTGTGTGGACATCTTGATCTAAGCCCAAAAGTATACAGTAATGATGCTTGGTATAACGTCATTGATGACGTAGACCCCCACTATCTAAAGCACTTTAAAGAATTCATGGGGGCCCAAAGGGACTGGCAAAGCAACACTAAGTACGGGAAAGCCATTCAAATTAAAGGTGGAATCCCAACTATCTTCCTATGCAATCCAGGCCCAACATCATCATATAAAGAGTACTTGAATGAGGATAAAAATTCAGCATTAAAAGATTGGGCATTAAAGAATGCGGAATTCATCACCCTCAACAGCCCATTGTACTCAGGTACCAATCAAAGTGCAACACAGAATAGCCAAGAGGAGGCCCATTCGGAGACGGAGAGTTGA |
| Protein Sequence | MPQPKKFLINAKNYSLTYPHCSLTKEEAFSQISALSTPTNKLFIRICRELHGDGSPHLHVLIQFGGKFKCQNNRFFDLTSPSRSAHFHPNIQGAKTSTDVKAYMEKDGDVLDHGVFQIDGRSARGGCQSANDAYAEAINARSKPAALNILKEKAPKDFVLQFHNLNSNLDRIFAPPIEVFVCPFLSSSFDQVPEELEEWVSENVSGAAARPWRPKSIVIEGDSRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQSNTKYGKAIQIKGGIPTIFLCNPGPTSSYKEYLNEDKNSALKDWALKNAEFITLNSPLYSGTNQSATQNSQEEAHSETES |
| NCBI Accession | NP_955748.1 |
|---|---|
| Location | 2148-2441 |
| Gene Name | AC4 |
| Protein Name | AC4 protein |
| Coding Region | ATGGGTCTCCTCACCTGCATGTCCTCATACAGTTCGGAGGCAAATTCAAGTGCCAAAACAACAGATTCTTCGATCTCACCTCCCCAAGCAGGTCAGCACATTTCCATCCGAACATTCAGGGAGCTAAAACCTCAACAGATGTTAAAGCATACATGGAAAAAGACGGAGACGTGCTTGATCATGGAGTTTTCCAAATCGATGGAAGATCAGCTAGAGGAGGTTGCCAATCTGCCAACGACGCATATGCCGAGGCAATCAATGCAAGGTCCAAACCAGCGGCCCTCAATATATTAA |
| Protein Sequence | MGLLTCMSSYSSEANSSAKTTDSSISPPQAGQHISIRTFRELKPQQMLKHTWKKTETCLIMEFSKSMEDQLEEVANLPTTHMPRQSMQGPNQRPSIY |
References More References in PubMed
| 1 |
Zhang H, et al. J Zhejiang Univ Sci B. 2010 Feb;11(2):109-14. doi: 10.1631/jzus.B0900176. PMID: 20104645 |
|---|---|
| 2 |
Molecular identification of tobacco leaf curl disease in Sichuan province of China. Jing C, et al. Virol J. 2016 Jan 6;13:4. doi: 10.1186/s12985-015-0461-7. PMID: 26738931 |
| 3 |
Guo T, et al. Sci Rep. 2015 Oct 21;5:15432. doi: 10.1038/srep15432. PMID: 26486606 |
| 4 |
Swapna Geetanjali A, et al. Virus Genes. 2013 Aug;47(1):184-8. doi: 10.1007/s11262-013-0901-7. Epub 2013 Mar 26. PMID: 23529301 |
| 5 |
First Report of Passiflora latent virus in Passion fruit (Passiflora edulis) in China. Bao S, et al. Plant Dis. 2023 Jun 27. doi: 10.1094/PDIS-05-23-0896-PDN. Online ahead of print. PMID: 37368448 |
| 6 |
Molecular characterization of two distinct begomoviruses from Papaya in China. Wang X, et al. Virus Genes. 2004 Dec;29(3):303-9. doi: 10.1007/s11262-004-7432-1. PMID: 15550769 |
| 7 |
Vector development and vitellogenin determine the transovarial transmission of begomoviruses. Wei J, et al. Proc Natl Acad Sci U S A. 2017 Jun 27;114(26):6746-6751. doi: 10.1073/pnas.1701720114. Epub 2017 Jun 12. PMID: 28607073 |
| 8 |
Guo T, et al. Virology. 2018 Feb;515:66-73. doi: 10.1016/j.virol.2017.12.004. Epub 2017 Dec 19. PMID: 29272747 |
| 9 |
Zhao J, et al. Virol J. 2019 Mar 11;16(1):32. doi: 10.1186/s12985-019-1138-4. PMID: 30857562 |
| 10 |
Etiology of Ageratum Yellow Vein Diseases in South China. Jiao X, et al. Plant Dis. 2013 Nov;97(11):1497-1503. doi: 10.1094/PDIS-01-13-0074-RE. PMID: 30708480 |