Genus | Begomovirus |
---|---|
NCBI Assembly | GCF_000887775.1 |
Isolate | India: Haryana |
Release date | 2015/2/22 |
Submitter | Singh-Pant,P., Pant,P., Mukherjee,S.K., Mazumdar-Leighton,S., Singh,P. |
Host | |
Download | Genome |GFF3 |PEP |CDS |
NCBI Accession | YP_004021917.1 |
---|---|
Location | 120-485 |
Gene Name | AV2 |
Protein Name | AV2 protein |
Coding Region | ATGTGGGACCCACTATTGAATGAGTTTCCAGAAACTGTTCATGGGTTTAGGTGCATGTTGGCAGTGAAATACCTCCAGCTAGTAGAAAATACGTATTCCCCAGACACTCTGGGATACGATTTAATTAGGGATTTAATTTCAGTTATTAGGGCTCGGAATTATGTCGAAGCGACCAGCAGATATCATCATTTCAACGCCCGCCTCGAAGGTACGCCGCCGTCTCAACTTCGACAGCCCATATGCGAGCCGCGCTGCTGCCCCCATTGTCCGCGTCACAAAAGCAAGGGCCTGGACCAACAGGCCCATGAACCGAAAGCCCAGGATGTACAGGATGTACAGGAGCCCAGATGTTCCAAGGGGCTGTGA |
Protein Sequence | MWDPLLNEFPETVHGFRCMLAVKYLQLVENTYSPDTLGYDLIRDLISVIRARNYVEATSRYHHFNARLEGTPPSQLRQPICEPRCCPHCPRHKSKGLDQQAHEPKAQDVQDVQEPRCSKGL |
NCBI Accession | YP_004021918.1 |
---|---|
Location | 258-548 |
Gene Name | AC5 |
Protein Name | AC5 protein |
Coding Region | ATGACTTTCCCAATGTGCTGGATATCATGTCTGGACTCAAATGACTGGACCTTACACGGGCCTTCACAGCCCCTTGGAACATCTGGGCTCCTGTACATCCTGTACATCCTGGGCTTTCGGTTCATGGGCCTGTTGGTCCAGGCCCTTGCTTTTGTGACGCGGACAATGGGGGCAGCAGCGCGGCTCGCATATGGGCTGTCGAAGTTGAGACGGCGGCGTACCTTCGAGGCGGGCGTTGAAATGATGATATCTGCTGGTCGCTTCGACATAATTCCGAGCCCTAATAACTGA |
Protein Sequence | MTFPMCWISCLDSNDWTLHGPSQPLGTSGLLYILYILGFRFMGLLVQALAFVTRTMGAAARLAYGLSKLRRRRTFEAGVEMMISAGRFDIIPSPNN |
NCBI Accession | YP_004021919.1 |
---|---|
Location | 280-1050 |
Gene Name | AV1 |
Protein Name | AV1 protein |
Coding Region | ATGTCGAAGCGACCAGCAGATATCATCATTTCAACGCCCGCCTCGAAGGTACGCCGCCGTCTCAACTTCGACAGCCCATATGCGAGCCGCGCTGCTGCCCCCATTGTCCGCGTCACAAAAGCAAGGGCCTGGACCAACAGGCCCATGAACCGAAAGCCCAGGATGTACAGGATGTACAGGAGCCCAGATGTTCCAAGGGGCTGTGAAGGCCCGTGTAAGGTCCAGTCATTTGAGTCCAGACATGATATCCAGCACATTGGGAAAGTCATGTGTGTTAGTGATGTTACTCGTGGTATTGGGCTGACCCACAGGGTTGGCAAGAGGTTCTGTGTGAAGTCCGTCTATGTATTGGGCAAGATTTGGATGGATGAGAACATCAAGACTAAGAATCATACGAATAGTGTTATGTTTTTCCTTGTTAGGGATCGTAGGCCTGTTGACAAGCCTCAAGATTTTGGTGAGGTTTTTAACATGTTTGATAATGAGCCCAGCACGGCGACTGTGAAGAATGTTCATCGTGACAGATATCAGGTGTTAAGGAAGTGGCATGCCACTGTGACAGGCGGTTTATACGCACCGAAGGAGCAGGCTCTCGTGAAGAAGTTTATTAGGGTCAATAATTATGTTGTGTACAACTACCAAGAGGCTGGCAAGTATGAGAATCATACTGAGAATGCATTGATGTTGTATATGGCGTGTACGCACGCCTCTAACCCCGTGTATGCCACTTTGAAGATACGGATCTACTTCTATGATTCAGTATCGAATTAA |
Protein Sequence | MSKRPADIIISTPASKVRRRLNFDSPYASRAAAPIVRVTKARAWTNRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDIQHIGKVMCVSDVTRGIGLTHRVGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPVDKPQDFGEVFNMFDNEPSTATVKNVHRDRYQVLRKWHATVTGGLYAPKEQALVKKFIRVNNYVVYNYQEAGKYENHTENALMLYMACTHASNPVYATLKIRIYFYDSVSN |
NCBI Accession | YP_004021920.1 |
---|---|
Location | 1047-1451 |
Gene Name | AC3 |
Protein Name | AC3 protein |
Coding Region | ATGGATTCACGCACAGGGGAATCCATCACTGCAGGTCATGCAATGAATGGCGTGTATATCTGGGAAACCCCAAATCCCCTCTATTTCAAGATAACAGAACACCACAACAGGCCGTTCCTAATGAAGGAAGACATCATCTCCGTTCAGATACAATTCAATCACAACCTCAGGAAGAGACTGGGGATAATGAATTGTTTCTTGGGCTTGAGGATCCACACTCGTTTACATCTTCAGACTTGGCATTTCTTAAGAGTCTTTAAGACTCAAGTTTTAAGATATTTAGATAGTTTAGGCGTAATTAGTATAAATAATTGTATTAAGGCTTTCAGACATGTATTATATGATGTACTTGAGGGCACAATTAATGTAATTGAGGATCATGATATAAAATTCAATATTTATTAA |
Protein Sequence | MDSRTGESITAGHAMNGVYIWETPNPLYFKITEHHNRPFLMKEDIISVQIQFNHNLRKRLGIMNCFLGLRIHTRLHLQTWHFLRVFKTQVLRYLDSLGVISINNCIKAFRHVLYDVLEGTINVIEDHDIKFNIY |
NCBI Accession | YP_004021921.1 |
---|---|
Location | 1192-1599 |
Gene Name | AC2 |
Protein Name | AC2 protein |
Coding Region | ATGCAACATTCATCACCCTCACAGAGCCACTGTACTCAGGTACCCATCAAGGTCCAACACAGGCTAGCCAAGCGTAGAGCCTTCCGGCGTAAGAGGGTTGACCTCGAGTGTGGCTGCTCATACTACGTACACATCAACTGCCACAACCATGGATTCACGCACAGGGGAATCCATCACTGCAGGTCATGCAATGAATGGCGTGTATATCTGGGAAACCCCAAATCCCCTCTATTTCAAGATAACAGAACACCACAACAGGCCGTTCCTAATGAAGGAAGACATCATCTCCGTTCAGATACAATTCAATCACAACCTCAGGAAGAGACTGGGGATAATGAATTGTTTCTTGGGCTTGAGGATCCACACTCGTTTACATCTTCAGACTTGGCATTTCTTAAGAGTCTTTAA |
Protein Sequence | MQHSSPSQSHCTQVPIKVQHRLAKRRAFRRKRVDLECGCSYYVHINCHNHGFTHRGIHHCRSCNEWRVYLGNPKSPLFQDNRTPQQAVPNEGRHHLRSDTIQSQPQEETGDNELFLGLEDPHSFTSSDLAFLKSL |
NCBI Accession | YP_004021922.1 |
---|---|
Location | 1523-2587 |
Gene Name | AC1 |
Protein Name | AC1 protein |
Coding Region | ATGGCTCCTCCCAAGCGTTTTCAAATATATGCCAAAAATTTCTTTCTCACTTATCCAAAATGCTCTCTTACTAAAGAAGAGGCACTCACCCAACTTCAGAACCTACAAACCCCAGTAAATAAAAAATACATAAAAATCTGCAGAGAGCTCCACGAAAATGGGGAACCTCATCTTCACGTGCTCATCCAGTTCGAAGGAAAATACAAGTGCCAAAATAACAGGTTCTTCGACCTGGTATCCCCAACCAGGTCAGCACATTTCCATCCGAACATTCAGGGAGCTAAGTCAAGCTCAGATGTCAAGTCCTATATGGAGAAGGATGGAGACACCCTCGACTGGGGAGAGTTTCAGATCGATGGACGATCTGCAAGAGGGGGACAACAGTCAGCCAATGATGCTTACGCCAAAGCAATTAATACAGGCAGTAAGTCAGAGGCTCTTAGAGTCATTAGGGAATTAGCCCCAAAGGATTATGTCTTACAATTTCATAATCTTAATGCTAATTTAGATAGGATTTTTGCACCTCCAATGGAGGTTTATGTTTCCCCTTTTCTTTCATCTTCCTTCGATCAAGTTCCAGAGGCCATAGAGGAATGGGCCTCTGAAAATGTGATGGGTCCCGCTGCGCGGCCATTGAGACCTAAAAGTATCGTCATTGAGGGTGATAGTCGTACGGGCAAGACAATGTGGGCCAGGTCTTTGGGACCACACAATTACCTGTGTGGACATTTAGATCTGAGTCGCAAGATATATTCAAATGATGCATGGTATAACATCATTGATGACGTAGACCCCCACTACCTAAAGCATTTTAAAGAGTTCATGGGGGTCCAGAGGGACTGGCAAAGTAACACCAAGTACGGGAAACCAGTTCAAATTAAAGGAGGTATTCCCACTATCTTCCTCTGCAATTCTGGGCCCAATTCCTGCTATAGAGAATACCTCGATGAGGAAAAGAACTCAGCACTGAGGTCGTGGGCTATACATAATGCAACATTCATCACCCTCACAGAGCCACTGTACTCAGGTACCCATCAAGGTCCAACACAGGCTAGCCAAGCGTAG |
Protein Sequence | MAPPKRFQIYAKNFFLTYPKCSLTKEEALTQLQNLQTPVNKKYIKICRELHENGEPHLHVLIQFEGKYKCQNNRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYMEKDGDTLDWGEFQIDGRSARGGQQSANDAYAKAINTGSKSEALRVIRELAPKDYVLQFHNLNANLDRIFAPPMEVYVSPFLSSSFDQVPEAIEEWASENVMGPAARPLRPKSIVIEGDSRTGKTMWARSLGPHNYLCGHLDLSRKIYSNDAWYNIIDDVDPHYLKHFKEFMGVQRDWQSNTKYGKPVQIKGGIPTIFLCNSGPNSCYREYLDEEKNSALRSWAIHNATFITLTEPLYSGTHQGPTQASQA |
NCBI Accession | YP_004021923.1 |
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Location | 2128-2430 |
Gene Name | AC4 |
Protein Name | AC4 protein |
Coding Region | ATGGGGAACCTCATCTTCACGTGCTCATCCAGTTCGAAGGAAAATACAAGTGCCAAAATAACAGGTTCTTCGACCTGGTATCCCCAACCAGGTCAGCACATTTCCATCCGAACATTCAGGGAGCTAAGTCAAGCTCAGATGTCAAGTCCTATATGGAGAAGGATGGAGACACCCTCGACTGGGGAGAGTTTCAGATCGATGGACGATCTGCAAGAGGGGGACAACAGTCAGCCAATGATGCTTACGCCAAAGCAATTAATACAGGCAGTAAGTCAGAGGCTCTTAGAGTCATTAGGGAATTAG |
Protein Sequence | MGNLIFTCSSSSKENTSAKITGSSTWYPQPGQHISIRTFRELSQAQMSSPIWRRMETPSTGESFRSMDDLQEGDNSQPMMLTPKQLIQAVSQRLLESLGN |
1 |
Cucurbit leaf crumple virus Identified in Common Bean in Florida. Adkins S, et al. Plant Dis. 2009 Mar;93(3):320. doi: 10.1094/PDIS-93-3-0320B. PMID: 30764208 |
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2 |
First Report of Papaya Leaf Curl Disease in Pakistan. Nadeem A, et al. Plant Dis. 1997 Nov;81(11):1333. doi: 10.1094/PDIS.1997.81.11.1333B. PMID: 30861752 |
3 |
First Report of Tomato leaf curl Palampur virus on Bitter Gourd in Pakistan. Ali I, et al. Plant Dis. 2010 Feb;94(2):276. doi: 10.1094/PDIS-94-2-0276A. PMID: 30754274 |
4 |
Idris AM, et al. J Virol. 2008 Feb;82(4):1959-67. doi: 10.1128/JVI.01992-07. Epub 2007 Dec 5. PMID: 18057231 |
5 |
Ilyas M, et al. Arch Virol. 2013 Feb;158(2):505-10. doi: 10.1007/s00705-012-1498-1. Epub 2012 Oct 12. PMID: 23065111 |
6 |
Spatial and temporal diversity of begomoviral complexes in papayas with leaf curl disease. Singh-Pant P, et al. Arch Virol. 2012 Jul;157(7):1217-32. doi: 10.1007/s00705-012-1287-x. Epub 2012 Mar 22. PMID: 22437254 |
7 |
Turechek WW, et al. Phytopathology. 2010 Nov;100(11):1194-203. doi: 10.1094/PHYTO-01-10-0018. PMID: 20649418 |