Genus | Begomovirus |
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NCBI Assembly | GCF_000887915.1 |
Isolate | India: Munthal, Haryana |
Release date | 2015/2/22 |
Submitter | Venkataravanappa,V., Lakshminarayana Reddy,C.N., Jalali,S., Krishna Reddy,M., Lakshiminarayanareddy,C.N., Devaraju, Swaranalatha,P., Krishnareddy,M. |
Host | |
Download | Genome |GFF3 |PEP |CDS |
NCBI Accession | YP_004123717.1 |
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Location | 121-486 |
Gene Name | AV2 |
Protein Name | precoat protein |
Coding Region | ATGTGGGATCCATTGTTAAACGAGTTCCCTGAGACGGTTCACGGGTTTCGTTGCATGCTTGCTATTAAATATCTTCAACAACTGTCTGAGGAATACTCTCCTGATACGGTTGGGTACGATCTAATTCGCGATCTAATTTCTATTTTACGTTGTAGGAATTATGTCGAAGCGTCCTGCCGATATCGTCATTTCTACCCCCGCGTCGAAGGTGCGTCGTCGACTGAACTTCGACAGCCCGTATTCAACCCGTGCAGTTGCCCCCACTGTCCGCGTCACAAAATCACGAATGTGGGCCAACAGACCCATGTACCGGAAGCCCAGAATGTACAGGATATACAGAAGCCCGGATGTTCCAAGAGGATGTGA |
Protein Sequence | MWDPLLNEFPETVHGFRCMLAIKYLQQLSEEYSPDTVGYDLIRDLISILRCRNYVEASCRYRHFYPRVEGASSTELRQPVFNPCSCPHCPRHKITNVGQQTHVPEAQNVQDIQKPGCSKRM |
NCBI Accession | YP_004123718.1 |
---|---|
Location | 281-1033 |
Gene Name | AV1 |
Protein Name | coat protein |
Coding Region | ATGTCGAAGCGTCCTGCCGATATCGTCATTTCTACCCCCGCGTCGAAGGTGCGTCGTCGACTGAACTTCGACAGCCCGTATTCAACCCGTGCAGTTGCCCCCACTGTCCGCGTCACAAAATCACGAATGTGGGCCAACAGACCCATGTACCGGAAGCCCAGAATGTACAGGATATACAGAAGCCCGGATGTTCCAAGAGGATGTGAAGGCCCATGTAAGGTGCAGTCTTTTGATGCGAAGAACGATATTGGTCACATGGGTAAGGTTATCTGTCTATCTGATGTTACTAGGGGTATTGGGCTGACCCATCGAGTAGGGAAACGTTTTTGCGTGAAGTCATTGATTTGCAGGGAGAACATCAAGACCAAGAACCATACGAATTCGGTGATGTTTTGGATCGTGAGAGACAGGCGTCCTACAGGCACCCCCTACGATTTCCAGCAAGTGTTCAATGTTTATGACAACGAGCCTTCTACGGCTACTGTAAAGAACGACCAGCGTGATCGATTCCAGGTTTTGAGGAGGTTTCAGGCGACAGTTACAGGAGGACAGTATGCTTGTAAGGAACAAGTTCCAATTAGGAAATTCTATCGTGTTAACAATTACGTGGTGTATAATCACCAGGAAGCTGGGAAGTATGAAAATCACACTGAGAATGCTTTGTTGTTGTATATGGCATGTACTCATGCCTCTAACCCTGTGTATGCTACTTTGAAAGTTAGGAGTTACTTCTACGATTCTGTAACGAATTAA |
Protein Sequence | MSKRPADIVISTPASKVRRRLNFDSPYSTRAVAPTVRVTKSRMWANRPMYRKPRMYRIYRSPDVPRGCEGPCKVQSFDAKNDIGHMGKVICLSDVTRGIGLTHRVGKRFCVKSLICRENIKTKNHTNSVMFWIVRDRRPTGTPYDFQQVFNVYDNEPSTATVKNDQRDRFQVLRRFQATVTGGQYACKEQVPIRKFYRVNNYVVYNHQEAGKYENHTENALLLYMACTHASNPVYATLKVRSYFYDSVTN |
NCBI Accession | YP_004123719.1 |
---|---|
Location | 1036-1440 |
Gene Name | AC3 |
Protein Name | replication enhancer protein |
Coding Region | ATGGATTCTCGCACAGGGGAACGCATCACTGCAGCTCATACAAGGAATGGCGTCTTTATCTGGGAGGTTCCAAATCCCCTCTATTTCAAGATCCTCAGCCACGACGACCGTCCATTCACGACGAACATGGACATAATAAAAATCAGGATCCAATTCAACTACAACCTTCGGAGAGCTCTGGGAGTGCACAAGTGTTTTCTGACCTTCCGAATCTGGACGACCTTACACCCTCAGACTGGTCTTTTCTTAAGGGTATTAAAAACCCAAGTCCTCAAGTATCTCAACAATCTAGGTGTAATCTCAATTAATTTAGTAATTAAGGCTGTAGAACACGTATTGTACAATGTAATTCAACAAACAATGTATGTGGATCAATATTCAGATATAAAATTCGATCTTTATTAA |
Protein Sequence | MDSRTGERITAAHTRNGVFIWEVPNPLYFKILSHDDRPFTTNMDIIKIRIQFNYNLRRALGVHKCFLTFRIWTTLHPQTGLFLRVLKTQVLKYLNNLGVISINLVIKAVEHVLYNVIQQTMYVDQYSDIKFDLY |
NCBI Accession | YP_004123720.1 |
---|---|
Location | 1133-1585 |
Gene Name | AC2 |
Protein Name | transcription activator protein |
Coding Region | ATGCGATCTTCGTCACCCTTGAAGGACCATTGTACTCAGGTACCAATCAAAGTACAGCACAGGGAAGCGAAGAGAGCGCACAGGAGGAAGAGAGTAGATCTTGAATGCGGGTGTTCTTATTATCTATCCATTAACTGCTTCAACCATGGATTCTCGCACAGGGGAACGCATCACTGCAGCTCATACAAGGAATGGCGTCTTTATCTGGGAGGTTCCAAATCCCCTCTATTTCAAGATCCTCAGCCACGACGACCGTCCATTCACGACGAACATGGACATAATAAAAATCAGGATCCAATTCAACTACAACCTTCGGAGAGCTCTGGGAGTGCACAAGTGTTTTCTGACCTTCCGAATCTGGACGACCTTACACCCTCAGACTGGTCTTTTCTTAAGGGTATTAAAAACCCAAGTCCTCAAGTATCTCAACAATCTAGGTGTAATCTCAATTAA |
Protein Sequence | MRSSSPLKDHCTQVPIKVQHREAKRAHRRKRVDLECGCSYYLSINCFNHGFSHRGTHHCSSYKEWRLYLGGSKSPLFQDPQPRRPSIHDEHGHNKNQDPIQLQPSESSGSAQVFSDLPNLDDLTPSDWSFLKGIKNPSPQVSQQSRCNLN |
NCBI Accession | YP_004123721.1 |
---|---|
Location | 1482-2570 |
Gene Name | AC1 |
Protein Name | replicase |
Coding Region | ATGCCTCCTAAGCGGTTCCTTATTAATTCCAAAAATTATTTCCTCACTTATCCCAAGTGCTCTCTCACAAGAGAAGAAGCACTTTCCCAAATCAAGAATTTCCAAACCCCCACTTCAAAAAAATATATTAAAATCTGCAGAGAACTTCATGAAAATGGGGAACCTCATCTGCACGTGCTCATCCAGATCGAGGGGAAATACAAGTGCCAGAATCAGCGATTCTTCGACCTGGTCTCCCCAAGCAGGTCAGCACATTTCCATCCGAACATACAGGGAGCTAAATCCAGCTCCGACGTCAAATCCTACATCGACAAGGACGGGGACACTCTCGAGTGGGGAGAGTTTCAGATCGACGGACGATCTGCTAGAGGGGGACAACAGACAGCCAACGACGCTTACGCCGCAGCGCTTAACGCAGGCAGTAAGTCAGAGGCTCTTAGAGTCATTAAGGAGTTAGCTCCAAAAGATTATGTATTACAATTCCATAATTTAAATGCTAATTTAGATAGGATTTTTACACCTCCTGTGGAGGTTTATGTTTCTCCTTTTTCTTCTTCTTCTTTTGATCAAGTTCCGGAAGAACTTGAGGAATGGGCTGCCGAGAACGTTGTCGACGCCGCTGCGCGGCCACTTAGACCACAAAGTATAGTGATTGAGGGAGATAGTCGTACCGGGAAGACGATGTGGGCTAGATCACTGGGTCCACATAACTATTTGTGTGGGCATCTAGACCTTAGTCCAAAGATCTACAGTAACGAGGCCTGGTATAACGTCATTGATGACGTAGATCCCCACTTCCTCAAACACTTTAAAGAGTTCATGGGGGCCCAAAGGGACTGGCAATCCAACACAAAGTACGGAAAGCCAGTTCAAATTAAAGGCGGCATACCAACAATCTTCCTCTGCAATCCTGGTCCCAACAGCAGTTATAAAGAGTTCTTAGACGAGGATAAGAACTCAGCACTAAAGAACTGGGCAGTGAAAAATGCGATCTTCGTCACCCTTGAAGGACCATTGTACTCAGGTACCAATCAAAGTACAGCACAGGGAAGCGAAGAGAGCGCACAGGAGGAAGAGAGTAGATCTTGA |
Protein Sequence | MPPKRFLINSKNYFLTYPKCSLTREEALSQIKNFQTPTSKKYIKICRELHENGEPHLHVLIQIEGKYKCQNQRFFDLVSPSRSAHFHPNIQGAKSSSDVKSYIDKDGDTLEWGEFQIDGRSARGGQQTANDAYAAALNAGSKSEALRVIKELAPKDYVLQFHNLNANLDRIFTPPVEVYVSPFSSSSFDQVPEELEEWAAENVVDAAARPLRPQSIVIEGDSRTGKTMWARSLGPHNYLCGHLDLSPKIYSNEAWYNVIDDVDPHFLKHFKEFMGAQRDWQSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLDEDKNSALKNWAVKNAIFVTLEGPLYSGTNQSTAQGSEESAQEEESRS |
NCBI Accession | YP_004123722.1 |
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Location | 2114-2416 |
Gene Name | AC4 |
Protein Name | AC4 protein |
Coding Region | ATGGGGAACCTCATCTGCACGTGCTCATCCAGATCGAGGGGAAATACAAGTGCCAGAATCAGCGATTCTTCGACCTGGTCTCCCCAAGCAGGTCAGCACATTTCCATCCGAACATACAGGGAGCTAAATCCAGCTCCGACGTCAAATCCTACATCGACAAGGACGGGGACACTCTCGAGTGGGGAGAGTTTCAGATCGACGGACGATCTGCTAGAGGGGGACAACAGACAGCCAACGACGCTTACGCCGCAGCGCTTAACGCAGGCAGTAAGTCAGAGGCTCTTAGAGTCATTAAGGAGTTAG |
Protein Sequence | MGNLICTCSSRSRGNTSARISDSSTWSPQAGQHISIRTYRELNPAPTSNPTSTRTGTLSSGESFRSTDDLLEGDNRQPTTLTPQRLTQAVSQRLLESLRS |
1 |
Infectivity of okra enation leaf curl virus and the role of its V2 protein in pathogenicity. Saeed F, et al. Virus Res. 2018 Aug 15;255:90-94. doi: 10.1016/j.virusres.2018.07.007. Epub 2018 Jul 18. PMID: 30009848 |
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2 |
Emmanuel CJ, et al. 3 Biotech. 2020 Dec;10(12):506. doi: 10.1007/s13205-020-02502-z. Epub 2020 Nov 4. PMID: 33184593 |
3 |
Gupta K, et al. J Virol Methods. 2022 Feb;300:114413. doi: 10.1016/j.jviromet.2021.114413. Epub 2021 Dec 10. PMID: 34902462 |
4 |
Singh AK, et al. Plant Dis. 2021 Sep;105(9):2595-2600. doi: 10.1094/PDIS-12-20-2655-RE. Epub 2021 Oct 28. PMID: 33393356 |
5 |
First report of an alphasatellite associated with Okra enation leaf curl virus. Chandran SA, et al. Virus Genes. 2013 Jun;46(3):585-7. doi: 10.1007/s11262-013-0898-y. Epub 2013 Mar 10. PMID: 23475199 |
6 |
Hameed U, et al. Plant Dis. 2014 Oct;98(10):1447. doi: 10.1094/PDIS-04-14-0345-PDN. PMID: 30704006 |
7 |
Naresh M, et al. Virusdisease. 2019 Dec;30(4):511-525. doi: 10.1007/s13337-019-00551-4. Epub 2019 Oct 29. PMID: 31897416 |
8 |
Yadav Y, et al. J Genet. 2020;99:84. PMID: 33361636 |
9 |
Gireeshbai S, et al. Lett Appl Microbiol. 2022 Oct;75(4):1000-1009. doi: 10.1111/lam.13774. Epub 2022 Jul 2. PMID: 35723883 |
10 |
Venkataravanappa V, et al. Indian J Virol. 2013 Sep;24(2):188-98. doi: 10.1007/s13337-013-0141-4. Epub 2013 Jul 16. PMID: 24426275 |