Alternanthera yellow vein virus

Basic Information

Genus Begomovirus
NCBI Assembly GCF_000866585.1
Isolate China:Guangxi
Release date 2015/2/13
Submitter Huang,J., Jiang,T., Zhou,X.
Host
Vector
Download Genome |GFF3 |PEP |CDS

Genomic Organization

JBrowse

Genome

NC_007211
ACCGATGGCCAAAAAAAAATTTATGCCGGGCCCACCTGGCAGCTTTTGTCTGCCACTAGACAATCCCGTCCAATCAGAATTCAGCCTCAAAGCTTAAATAAAATTGGCGCCCGCTTTAAATGCTTGGCCGCTACGTTTAGTGCGCTGTCCACTATGTGGGATCCGCTTTTGAACCCGTTTCCCCAGACCGTGCACGCCTTTCGTTGCATGCTTTCTGTAAAGTATTTACAGGCCGTTGAAGACACATACGCTCCTGATACTTTAGGCGCTGATTTAATTAGGGAGTTAATTGCAGTAATTAGGGCAAATAATTATGTCGAAGCGTGCAGCAGATATGATCATTTCATCAAGCGGGTCGAGGGTACGACGTCGGCTCAACTTCGACAGCCCTATGGCTCGCCGTGCTACTGCCCCCATTGTCCGTGCCACTCGAAAACAGCAGTGGTCGAGCCGCCCCATGTATCGCAAGCCAAGGTTGTACCGAATGTACAGAAGCCCTGATGTGCCTTATGGCTGTGAGGGTCCGTGTAAGGTCCAGTCATTTGAAAAAAAACATGACGTTAGTCATACTGGCACGTTGTTGTGTGTTTCTGATGTTACCAGAGGTAGTGGGATTACTCATAGAGTAGGGAAGCGTTTCTGCATCAAGTCAATATACATCATAGGGAAGATATGGATGGACGAGAACATTAAGTCCAAGAATCATACTAACACGGTTATGTTCTGGTTAGTTAGGGATCGCCGCCCAGTTACAACGCCTTATGGCTTTGGTGAGGCGTTTAATATGTATGACAATGAGCCCTCTACAGCCACTATCAAGAACGATCTGCGTGATCGTTTGCAGGTGTTACACAGGTTTTCTGCCACAGTTACTGGGGGTCAGTATGCGTCTAAGGAACAGGCTATGATCAAGCGTTTCTGGAGGATTAACAACCATGTGGTCTACAACCATCAGGAGAAGGCAGCTTATGAAAATCATACTGAGAATGCCTTAGTTTTGTATATGGCTTGTACTCATGCTAGCAATCCTGTGTATGCTACGCTGAAAATTAGAATATATTTCTACGACTCTGTAATGAATTAATAAATATTGAATTTTATTATATGATTGAAGTTTACATACAACGTATTGTGCAATGCATTCCATAGTACATGATTTATTGCTCTAATTACATTGTTAAGACAAATTACACCAAGATTATCTAAATACTTCATAACTTGGGTCTTAAAGACCCTTAAGAAACTCAATGTCTGAGGTTGTAAGCGAGTCCAGATCTGGCAAGTCAGAAAACATTTGTGTATCCCCAAAGCCTTCCGCAGGTTGTAGTTGAACTGTATCTGAACTGTAATGATGTCGTGTTCCCGTAGGAATGGTCTGCTGTCGTGTTTGATGATCTTGAAATATAGGGGATTGGTTATTTCCCAGGTATACACGCCATTCTCTGCCTGAGCTGCAGTGATGTATTCCCCTGTGCGTGAATCCATAGTTGTGACAGTCAATGGAGATGTATAGTGAACAGCCGCAACGCAGATCAACCCTCCGTCTGCGAGGTTTCCTCTTGGCTAGCCTGTGTTGGACTTTGATGGGAACCTGAGTACAGCGGCTGGTTGATGGTGACGAAGGTCGCATTCTTTATGGCCCAGTTTTTTAGACCTATGTTTTTCTCCTCATCAAGGAACTCTTTATAGGAGGATGTTGGACCAGGATTGCAGAGGAAGATTGTTGGGATCCCGCCTTTAATTTGAACGGGCTTCCCGTATTTTGTATTGGACTGCCAATCCCTTTGGGCCCCCATGAATTCCTTGAAATGTTTTACATAGTGAGGATCAACATCGTCTATTATGTTATACCAGGCTTCGTTGCTGTAAACCCTAGGACTAAGGTCAATATGACCGCATAAGTAATTATGTGGACCTAATGATCTAGCCCACATGGTTTTCCCAGTCCTGCTGTCACCTTCTATAACTATACTTATTGGTCTCCATGGCCGCGCAGCGGCAGACATTACATTGTCTGCGGCCCATTCTTCAATCTCTTCAGGGACTTGATCAAACGATGAACAATTAAATGGACTAATGTACTCTTCAATAGGAGGCATGAAAATGCGTTCCAGATTAGCATTTAAATTATGAAATTGTAATACATAGTCCTTAGGAGCTAACTCCTTAATTACATCAAGAGCTTGATCCTTATTGCCTGTGTTAATTGCTCTTGCGTAAGCATCGTTTGCTGTCTGTTGTCCCCCTCTTGCAGATCTTCCATCAATCTGGAAGGTGCCCCAGTCAAGTATGTCCCCGTCCTTCTCGATGTATGCCTTAACGTCTGAACTGGACTTAGCATCGGTGATGAAGCAGTGGTATTGGGAGGAGGAGTTGGGTGACTGTAAGTCGAAGAATCTCGGATTCGTGAGGTCGAACTTGCCCTCGAATTGCACAAGAGCATGGAGATGAGGGTTTCCATCCTCGTGTAGTTCTCTACAAACCCTAATGAATTTCTTGTTTACAGGGGTTTGTATATTGAGTAATTGTTCTAGTGCCTCTTCTTTAGAGATAGGGCACTGTGAGTAAGTGAGGAAGAAGTTCTTCCTATTTAATCTGAATCTCCCAGGCTGACGCATGATGACGTATGTATCCCCCGATTGGAGCTCTCTTCAAACTTCCTAGTCAATGGGTGGATAGGTGGATGTTATATAGTGGGGATTTTTCCGGAATAAAAAATTTTTTTTTGGCCATCGCAATAATATT

Gene Information

NCBI Accession YP_271824.1
Location 154-501
Gene Name av2
Protein Name AV2 protein
Coding Region ATGTGGGATCCGCTTTTGAACCCGTTTCCCCAGACCGTGCACGCCTTTCGTTGCATGCTTTCTGTAAAGTATTTACAGGCCGTTGAAGACACATACGCTCCTGATACTTTAGGCGCTGATTTAATTAGGGAGTTAATTGCAGTAATTAGGGCAAATAATTATGTCGAAGCGTGCAGCAGATATGATCATTTCATCAAGCGGGTCGAGGGTACGACGTCGGCTCAACTTCGACAGCCCTATGGCTCGCCGTGCTACTGCCCCCATTGTCCGTGCCACTCGAAAACAGCAGTGGTCGAGCCGCCCCATGTATCGCAAGCCAAGGTTGTACCGAATGTACAGAAGCCCTGA
Protein Sequence MWDPLLNPFPQTVHAFRCMLSVKYLQAVEDTYAPDTLGADLIRELIAVIRANNYVEACSRYDHFIKRVEGTTSAQLRQPYGSPCYCPHCPCHSKTAVVEPPHVSQAKVVPNVQKP

NCBI Accession YP_271825.1
Location 314-1084
Gene Name cp
Protein Name CP protein
Coding Region ATGTCGAAGCGTGCAGCAGATATGATCATTTCATCAAGCGGGTCGAGGGTACGACGTCGGCTCAACTTCGACAGCCCTATGGCTCGCCGTGCTACTGCCCCCATTGTCCGTGCCACTCGAAAACAGCAGTGGTCGAGCCGCCCCATGTATCGCAAGCCAAGGTTGTACCGAATGTACAGAAGCCCTGATGTGCCTTATGGCTGTGAGGGTCCGTGTAAGGTCCAGTCATTTGAAAAAAAACATGACGTTAGTCATACTGGCACGTTGTTGTGTGTTTCTGATGTTACCAGAGGTAGTGGGATTACTCATAGAGTAGGGAAGCGTTTCTGCATCAAGTCAATATACATCATAGGGAAGATATGGATGGACGAGAACATTAAGTCCAAGAATCATACTAACACGGTTATGTTCTGGTTAGTTAGGGATCGCCGCCCAGTTACAACGCCTTATGGCTTTGGTGAGGCGTTTAATATGTATGACAATGAGCCCTCTACAGCCACTATCAAGAACGATCTGCGTGATCGTTTGCAGGTGTTACACAGGTTTTCTGCCACAGTTACTGGGGGTCAGTATGCGTCTAAGGAACAGGCTATGATCAAGCGTTTCTGGAGGATTAACAACCATGTGGTCTACAACCATCAGGAGAAGGCAGCTTATGAAAATCATACTGAGAATGCCTTAGTTTTGTATATGGCTTGTACTCATGCTAGCAATCCTGTGTATGCTACGCTGAAAATTAGAATATATTTCTACGACTCTGTAATGAATTAA
Protein Sequence MSKRAADMIISSSGSRVRRRLNFDSPMARRATAPIVRATRKQQWSSRPMYRKPRLYRMYRSPDVPYGCEGPCKVQSFEKKHDVSHTGTLLCVSDVTRGSGITHRVGKRFCIKSIYIIGKIWMDENIKSKNHTNTVMFWLVRDRRPVTTPYGFGEAFNMYDNEPSTATIKNDLRDRLQVLHRFSATVTGGQYASKEQAMIKRFWRINNHVVYNHQEKAAYENHTENALVLYMACTHASNPVYATLKIRIYFYDSVMN

NCBI Accession YP_271826.1
Location 1081-1485
Gene Name ac3
Protein Name AC3 protein
Coding Region ATGGATTCACGCACAGGGGAATACATCACTGCAGCTCAGGCAGAGAATGGCGTGTATACCTGGGAAATAACCAATCCCCTATATTTCAAGATCATCAAACACGACAGCAGACCATTCCTACGGGAACACGACATCATTACAGTTCAGATACAGTTCAACTACAACCTGCGGAAGGCTTTGGGGATACACAAATGTTTTCTGACTTGCCAGATCTGGACTCGCTTACAACCTCAGACATTGAGTTTCTTAAGGGTCTTTAAGACCCAAGTTATGAAGTATTTAGATAATCTTGGTGTAATTTGTCTTAACAATGTAATTAGAGCAATAAATCATGTACTATGGAATGCATTGCACAATACGTTGTATGTAAACTTCAATCATATAATAAAATTCAATATTTATTAA
Protein Sequence MDSRTGEYITAAQAENGVYTWEITNPLYFKIIKHDSRPFLREHDIITVQIQFNYNLRKALGIHKCFLTCQIWTRLQPQTLSFLRVFKTQVMKYLDNLGVICLNNVIRAINHVLWNALHNTLYVNFNHIIKFNIY

NCBI Accession YP_271827.1
Location 1226-1630
Gene Name ac2
Protein Name AC2 protein
Coding Region ATGCGACCTTCGTCACCATCAACCAGCCGCTGTACTCAGGTTCCCATCAAAGTCCAACACAGGCTAGCCAAGAGGAAACCTCGCAGACGGAGGGTTGATCTGCGTTGCGGCTGTTCACTATACATCTCCATTGACTGTCACAACTATGGATTCACGCACAGGGGAATACATCACTGCAGCTCAGGCAGAGAATGGCGTGTATACCTGGGAAATAACCAATCCCCTATATTTCAAGATCATCAAACACGACAGCAGACCATTCCTACGGGAACACGACATCATTACAGTTCAGATACAGTTCAACTACAACCTGCGGAAGGCTTTGGGGATACACAAATGTTTTCTGACTTGCCAGATCTGGACTCGCTTACAACCTCAGACATTGAGTTTCTTAAGGGTCTTTAA
Protein Sequence MRPSSPSTSRCTQVPIKVQHRLAKRKPRRRRVDLRCGCSLYISIDCHNYGFTHRGIHHCSSGREWRVYLGNNQSPIFQDHQTRQQTIPTGTRHHYSSDTVQLQPAEGFGDTQMFSDLPDLDSLTTSDIEFLKGL

NCBI Accession YP_271828.1
Location 1533-2618
Gene Name ac1
Protein Name AC1 protein
Coding Region ATGCGTCAGCCTGGGAGATTCAGATTAAATAGGAAGAACTTCTTCCTCACTTACTCACAGTGCCCTATCTCTAAAGAAGAGGCACTAGAACAATTACTCAATATACAAACCCCTGTAAACAAGAAATTCATTAGGGTTTGTAGAGAACTACACGAGGATGGAAACCCTCATCTCCATGCTCTTGTGCAATTCGAGGGCAAGTTCGACCTCACGAATCCGAGATTCTTCGACTTACAGTCACCCAACTCCTCCTCCCAATACCACTGCTTCATCACCGATGCTAAGTCCAGTTCAGACGTTAAGGCATACATCGAGAAGGACGGGGACATACTTGACTGGGGCACCTTCCAGATTGATGGAAGATCTGCAAGAGGGGGACAACAGACAGCAAACGATGCTTACGCAAGAGCAATTAACACAGGCAATAAGGATCAAGCTCTTGATGTAATTAAGGAGTTAGCTCCTAAGGACTATGTATTACAATTTCATAATTTAAATGCTAATCTGGAACGCATTTTCATGCCTCCTATTGAAGAGTACATTAGTCCATTTAATTGTTCATCGTTTGATCAAGTCCCTGAAGAGATTGAAGAATGGGCCGCAGACAATGTAATGTCTGCCGCTGCGCGGCCATGGAGACCAATAAGTATAGTTATAGAAGGTGACAGCAGGACTGGGAAAACCATGTGGGCTAGATCATTAGGTCCACATAATTACTTATGCGGTCATATTGACCTTAGTCCTAGGGTTTACAGCAACGAAGCCTGGTATAACATAATAGACGATGTTGATCCTCACTATGTAAAACATTTCAAGGAATTCATGGGGGCCCAAAGGGATTGGCAGTCCAATACAAAATACGGGAAGCCCGTTCAAATTAAAGGCGGGATCCCAACAATCTTCCTCTGCAATCCTGGTCCAACATCCTCCTATAAAGAGTTCCTTGATGAGGAGAAAAACATAGGTCTAAAAAACTGGGCCATAAAGAATGCGACCTTCGTCACCATCAACCAGCCGCTGTACTCAGGTTCCCATCAAAGTCCAACACAGGCTAGCCAAGAGGAAACCTCGCAGACGGAGGGTTGA
Protein Sequence MRQPGRFRLNRKNFFLTYSQCPISKEEALEQLLNIQTPVNKKFIRVCRELHEDGNPHLHALVQFEGKFDLTNPRFFDLQSPNSSSQYHCFITDAKSSSDVKAYIEKDGDILDWGTFQIDGRSARGGQQTANDAYARAINTGNKDQALDVIKELAPKDYVLQFHNLNANLERIFMPPIEEYISPFNCSSFDQVPEEIEEWAADNVMSAAARPWRPISIVIEGDSRTGKTMWARSLGPHNYLCGHIDLSPRVYSNEAWYNIIDDVDPHYVKHFKEFMGAQRDWQSNTKYGKPVQIKGGIPTIFLCNPGPTSSYKEFLDEEKNIGLKNWAIKNATFVTINQPLYSGSHQSPTQASQEETSQTEG

NCBI Accession YP_271829.1
Location 2171-2461
Gene Name ac4
Protein Name AC4 protein
Coding Region ATGGAAACCCTCATCTCCATGCTCTTGTGCAATTCGAGGGCAAGTTCGACCTCACGAATCCGAGATTCTTCGACTTACAGTCACCCAACTCCTCCTCCCAATACCACTGCTTCATCACCGATGCTAAGTCCAGTTCAGACGTTAAGGCATACATCGAGAAGGACGGGGACATACTTGACTGGGGCACCTTCCAGATTGATGGAAGATCTGCAAGAGGGGGACAACAGACAGCAAACGATGCTTACGCAAGAGCAATTAACACAGGCAATAAGGATCAAGCTCTTGATGTAA
Protein Sequence METLISMLLCNSRASSTSRIRDSSTYSHPTPPPNTTASSPMLSPVQTLRHTSRRTGTYLTGAPSRLMEDLQEGDNRQQTMLTQEQLTQAIRIKLLM

References More References in PubMed

1

Alternanthera yellow vein virus (AYVV); a betasatellite independent begomovirus infecting Sonchus palustris in Pakistan.

Nawaz-Ul-Rehman MS, et al.  Braz J Biol. 2022 Jun 13;82:e262248. doi: 10.1590/1519-6984.262248. eCollection 2022.

PMID: 35703634
2

Molecular Signature of a Novel Alternanthera Yellow Vein Virus Variant Infecting the Ageratum conyzoides Weed in Oman.

Shafiq M, et al.  Viruses. 2023 Dec 4;15(12):2381. doi: 10.3390/v15122381.

PMID: 38140622
3

First Report of Ageratum yellow vein China virus Infecting Zinnia elegans in Vietnam.

Li ZB, et al.  Plant Dis. 2013 Mar;97(3):431. doi: 10.1094/PDIS-10-12-0943-PDN.

PMID: 30722387
4

Characterization of begomovirus components from a weed suggests that begomoviruses may associate with multiple distinct DNA satellites.

Mubin M, et al.  Virus Genes. 2010 Jun;40(3):452-7. doi: 10.1007/s11262-010-0470-y. Epub 2010 Mar 20.

PMID: 20306125