Mesta yellow vein mosaic Bahraich virus
Basic Information
| Genus |
Begomovirus
|
| NCBI Assembly |
GCF_000879475.1 |
| Isolate |
India: North India, Bahraich |
| Release date |
2015/2/22 |
| Submitter |
Das,S., Ghosh,R., Paul,S., Roy,A., Ghosh,S.K., Das,A., Palit,P., Acharyya,S., Mir,J.I. |
| Host |
|
| Vector |
|
| Download |
Genome
|GFF3
|PEP
|CDS |
Genomic Organization
JBrowse
Genome
ACCGGATGGCCGCGCGATTTTTTTAAGTGTGGGTCCAGAACGCACCACGATGCAGACTCAAAGCTTAGATACGCTCCTTCGGCTATAAGTACTTGCGACTAAGTTTCAATTCAAAAATGTGGGATCCACTATTAAACGAATTTCCGGATACGGTGCACGGGTTTCGGTGTATGCTTTCTGTCAAATATTTGCAACTTTTATCGCAGGATTATTCACCGGATACACTTGGTTACGAGTTAATACGGGATTTAATCTGTATTTTACGCTCTCGTAATTATGTCGAAGCGAGCTGCAGATATCGTCATTTCTACGCCCGCGTCGAAAGTACGTCGGCGTCTGAACTTCGGCAGCCCATACACCAGCCGTGTTGCTGCCCCCATTGTCCGCGTCACAAAGCAACAGGCATGGACAAACAGACCTATGAACAGGAAGCCCAGAATGTATCGGATGTACAGAAGTCCGGATGTTCCAAGGGGTTGTGAGGGTCCCTGTAAGGTACAATCGTTTGTGTCGACACCTGATGTTGTCCATATTGGTAAGGTGATGTGTATTTCTGATGTTACGCGTGGAGTCGGTTTGACCCATCGTATTGGTAAACGTTTTTGTGTCAAGTCAGTTTATGTTTTAGGTAAGATATGGATGGATGAAAATATAAAGACCAAGAATCACACGAATTCTGTGATGTTCTTCTTAGTCCGCGACCGTCGTCCTGTTGACAAACCTCAGGATTTTGGTGAGGTATTCAATATGTTTGACAACGAACCCAGTACAGCAACTGTGAAGAATAGTCATAGGGATCGTTACCAGGTGTTGAGGAAATGGCATGCAACCGTCACGGGTGGTCAATATGCGAGTAATGAACATGCTTTGGTCAAGAAGTTTGTCAGAGTTAACAATTATGTTGTTTACAACCAGCAGGAGGCAGGAAAATACGAGAATCACACCGAGAATGCATTGATGCTTTATATGGCTTGTACCCATGCTAGTAACCCTGTTTATGCTCCGCTTAAGATTCGGATTTATTTTTATGACTCTGTAACGAATTGAAATTAATAAAGTTTGAATTTTATATCTGAATATTGGTCTACATACATTGTTTGATTAATTACATTGTACAATACATGTTCAACGGCTTTAATAACTAAATTAAGTGAGATTACACCGAGATTGTTGAGATACTTGAGTACTTGGGTTTTGAATACCCTTAAGAAAAGACCAGTCGGAGGGTGTAAGGTCGTCCAGATTCGGAAGGTTAGAAAACACTTGTGCACTCCCAGAGCTTTTCGAAGGTTGTAGTTGATATGGATCCTCATTGTTATGATGTCCATGTTCGTCGTGAATGGACGGTTGTCGTGGCTGAGGATTTTGAAATATAGGGGATTTGGAACCTCCCAGATAAAGACGCCATCCGTTGAATGAGCTGCAGTGATGCGTTCCCCTGTGCGAGAATCCATGGTTGTGGCAGTTGATACTTAGGTAATAGCTGCATCCACACTCAAGGTCCACTCGTTTCCTCCTGTTGCGCCTCTTCGCTTCCCTGTGTTGAACTTTGATTGGTACCGGAGTAGAGCGGTTGGGTGAGAAAGACGAATGTTGCATTTTTTAAAGCCCAGGATTTTAATGCTGAGTTCTTATCCTCGTCTAAGAACTCTTTATAACTTGCATTGGGCCCTGGATTGCAGAGGAAGATTGTTGGTATTCCGCCTTTAATTTGAACTGGCTTCCCGTACTTTGTGTTGGATTGCCAGTCCCTTTGGGCCCCCATGAACTCTTTAAAGTGTTTGAGGTAGTGCGGATCGACGTCATCAATGACGTTATACCATGCGTCGTTACTGTACACCTTTGGGCTAAGATCTAAATGCCCACATAGATAGTTGTGTGGGCCTAAAGACCTAGCCCACATAGTCTTCCCAGTACGACTATCTCCCTCAATTACTATACTTTGAGGTCTAAGGGGCCGCGCAGCGGCGTCAACAACATTCTCCGACGCCCACTCTTCAAGTTCTTCTGGAACTTGATCGAAAGAAGAAGACGAAAAAGGAGAAACATAAGGAGCTGGTGGCTCCTGAAAGATTCTGTTTAAATTTGCATTTAAATTATGAAATTGCAGTACAAAATCTTTAGGAGCCAGTTCCTTAATGACTCTAATAGCCTCCGACTTACTTCCCGCGTTAAGTGCTGCGGCGTAAGCGTCATTGGCTGTCTGTTGCCCTCCTCTTGCTGACCTTCCGTCGATCTGAAATTGTCCCCAGTCGAGAATGTCCCCGTCCTTCTCGATGTAGGACTTGACGTCGGAGCTGGATTTAGCTCCCTGTATGTTTGGTCGGAAATGTGCTGACCAGCTTGGGGAGACCAAGTCGAAGAATCGCATATTCTGGCACTTGAATTTCCCTTCGAACTGGATGAGAACTCGCACGCGAGGAGTCCCATCTTCGTGAAGCTCTCTGCAGATTCTAATATATTTTTTTGAAGTTGGGGTTTGGAGATTTAATAATTGGGAAAGTGCTTCCTCTTTGGTGAGAGAACATTTGGGATAAGTGACGAAATAGTCTTTGGAATAAATACCGTTACGCCTTGGAGGCATGTTGACTAGAATTGATCACCGATTGACCGCTCTTGCAACTCTCTCCTGTATATCGGTGATCAATATATAGTGATCACCAAATGGCATAATGGTAATAAAACAACTTTAATTTGAAATTCAAAAAAAAATTTTTGCGGCCATCCGCTTAATATT
Gene Information
|
NCBI Accession
|
YP_001955938.1
|
|
Location
|
117-482 |
|
Gene Name
|
AV2 |
|
Protein Name
|
AV2 |
|
Coding Region
|
ATGTGGGATCCACTATTAAACGAATTTCCGGATACGGTGCACGGGTTTCGGTGTATGCTTTCTGTCAAATATTTGCAACTTTTATCGCAGGATTATTCACCGGATACACTTGGTTACGAGTTAATACGGGATTTAATCTGTATTTTACGCTCTCGTAATTATGTCGAAGCGAGCTGCAGATATCGTCATTTCTACGCCCGCGTCGAAAGTACGTCGGCGTCTGAACTTCGGCAGCCCATACACCAGCCGTGTTGCTGCCCCCATTGTCCGCGTCACAAAGCAACAGGCATGGACAAACAGACCTATGAACAGGAAGCCCAGAATGTATCGGATGTACAGAAGTCCGGATGTTCCAAGGGGTTGTGA |
|
Protein Sequence
|
MWDPLLNEFPDTVHGFRCMLSVKYLQLLSQDYSPDTLGYELIRDLICILRSRNYVEASCRYRHFYARVESTSASELRQPIHQPCCCPHCPRHKATGMDKQTYEQEAQNVSDVQKSGCSKGL |
|
NCBI Accession
|
YP_001955939.1
|
|
Location
|
181-585 |
|
Gene Name
|
AC5 |
|
Protein Name
|
AC5 |
|
Coding Region
|
ATGGGTCAAACCGACTCCACGCGTAACATCAGAAATACACATCACCTTACCAATATGGACAACATCAGGTGTCGACACAAACGATTGTACCTTACAGGGACCCTCACAACCCCTTGGAACATCCGGACTTCTGTACATCCGATACATTCTGGGCTTCCTGTTCATAGGTCTGTTTGTCCATGCCTGTTGCTTTGTGACGCGGACAATGGGGGCAGCAACACGGCTGGTGTATGGGCTGCCGAAGTTCAGACGCCGACGTACTTTCGACGCGGGCGTAGAAATGACGATATCTGCAGCTCGCTTCGACATAATTACGAGAGCGTAAAATACAGATTAAATCCCGTATTAACTCGTAACCAAGTGTATCCGGTGAATAATCCTGCGATAAAAGTTGCAAATATTTGA |
|
Protein Sequence
|
MGQTDSTRNIRNTHHLTNMDNIRCRHKRLYLTGTLTTPWNIRTSVHPIHSGLPVHRSVCPCLLLCDADNGGSNTAGVWAAEVQTPTYFRRGRRNDDICSSLRHNYESVKYRLNPVLTRNQVYPVNNPAIKVANI |
|
NCBI Accession
|
YP_001955940.1
|
|
Location
|
277-1047 |
|
Gene Name
|
AV1 |
|
Protein Name
|
coat protein |
|
Coding Region
|
ATGTCGAAGCGAGCTGCAGATATCGTCATTTCTACGCCCGCGTCGAAAGTACGTCGGCGTCTGAACTTCGGCAGCCCATACACCAGCCGTGTTGCTGCCCCCATTGTCCGCGTCACAAAGCAACAGGCATGGACAAACAGACCTATGAACAGGAAGCCCAGAATGTATCGGATGTACAGAAGTCCGGATGTTCCAAGGGGTTGTGAGGGTCCCTGTAAGGTACAATCGTTTGTGTCGACACCTGATGTTGTCCATATTGGTAAGGTGATGTGTATTTCTGATGTTACGCGTGGAGTCGGTTTGACCCATCGTATTGGTAAACGTTTTTGTGTCAAGTCAGTTTATGTTTTAGGTAAGATATGGATGGATGAAAATATAAAGACCAAGAATCACACGAATTCTGTGATGTTCTTCTTAGTCCGCGACCGTCGTCCTGTTGACAAACCTCAGGATTTTGGTGAGGTATTCAATATGTTTGACAACGAACCCAGTACAGCAACTGTGAAGAATAGTCATAGGGATCGTTACCAGGTGTTGAGGAAATGGCATGCAACCGTCACGGGTGGTCAATATGCGAGTAATGAACATGCTTTGGTCAAGAAGTTTGTCAGAGTTAACAATTATGTTGTTTACAACCAGCAGGAGGCAGGAAAATACGAGAATCACACCGAGAATGCATTGATGCTTTATATGGCTTGTACCCATGCTAGTAACCCTGTTTATGCTCCGCTTAAGATTCGGATTTATTTTTATGACTCTGTAACGAATTGA |
|
Protein Sequence
|
MSKRAADIVISTPASKVRRRLNFGSPYTSRVAAPIVRVTKQQAWTNRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFVSTPDVVHIGKVMCISDVTRGVGLTHRIGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPVDKPQDFGEVFNMFDNEPSTATVKNSHRDRYQVLRKWHATVTGGQYASNEHALVKKFVRVNNYVVYNQQEAGKYENHTENALMLYMACTHASNPVYAPLKIRIYFYDSVTN |
|
NCBI Accession
|
YP_001955941.1
|
|
Location
|
1050-1454 |
|
Gene Name
|
AC3 |
|
Protein Name
|
replication enhancer protein |
|
Coding Region
|
ATGGATTCTCGCACAGGGGAACGCATCACTGCAGCTCATTCAACGGATGGCGTCTTTATCTGGGAGGTTCCAAATCCCCTATATTTCAAAATCCTCAGCCACGACAACCGTCCATTCACGACGAACATGGACATCATAACAATGAGGATCCATATCAACTACAACCTTCGAAAAGCTCTGGGAGTGCACAAGTGTTTTCTAACCTTCCGAATCTGGACGACCTTACACCCTCCGACTGGTCTTTTCTTAAGGGTATTCAAAACCCAAGTACTCAAGTATCTCAACAATCTCGGTGTAATCTCACTTAATTTAGTTATTAAAGCCGTTGAACATGTATTGTACAATGTAATTAATCAAACAATGTATGTAGACCAATATTCAGATATAAAATTCAAACTTTATTAA |
|
Protein Sequence
|
MDSRTGERITAAHSTDGVFIWEVPNPLYFKILSHDNRPFTTNMDIITMRIHINYNLRKALGVHKCFLTFRIWTTLHPPTGLFLRVFKTQVLKYLNNLGVISLNLVIKAVEHVLYNVINQTMYVDQYSDIKFKLY |
|
NCBI Accession
|
YP_001955942.1
|
|
Location
|
1147-1599 |
|
Gene Name
|
AC2 |
|
Protein Name
|
transcription activator protein |
|
Coding Region
|
ATGCAACATTCGTCTTTCTCACCCAACCGCTCTACTCCGGTACCAATCAAAGTTCAACACAGGGAAGCGAAGAGGCGCAACAGGAGGAAACGAGTGGACCTTGAGTGTGGATGCAGCTATTACCTAAGTATCAACTGCCACAACCATGGATTCTCGCACAGGGGAACGCATCACTGCAGCTCATTCAACGGATGGCGTCTTTATCTGGGAGGTTCCAAATCCCCTATATTTCAAAATCCTCAGCCACGACAACCGTCCATTCACGACGAACATGGACATCATAACAATGAGGATCCATATCAACTACAACCTTCGAAAAGCTCTGGGAGTGCACAAGTGTTTTCTAACCTTCCGAATCTGGACGACCTTACACCCTCCGACTGGTCTTTTCTTAAGGGTATTCAAAACCCAAGTACTCAAGTATCTCAACAATCTCGGTGTAATCTCACTTAA |
|
Protein Sequence
|
MQHSSFSPNRSTPVPIKVQHREAKRRNRRKRVDLECGCSYYLSINCHNHGFSHRGTHHCSSFNGWRLYLGGSKSPIFQNPQPRQPSIHDEHGHHNNEDPYQLQPSKSSGSAQVFSNLPNLDDLTPSDWSFLKGIQNPSTQVSQQSRCNLT |
|
NCBI Accession
|
YP_001955943.1
|
|
Location
|
1496-2584 |
|
Gene Name
|
AC1 |
|
Protein Name
|
replication initiator protein |
|
Coding Region
|
ATGCCTCCAAGGCGTAACGGTATTTATTCCAAAGACTATTTCGTCACTTATCCCAAATGTTCTCTCACCAAAGAGGAAGCACTTTCCCAATTATTAAATCTCCAAACCCCAACTTCAAAAAAATATATTAGAATCTGCAGAGAGCTTCACGAAGATGGGACTCCTCGCGTGCGAGTTCTCATCCAGTTCGAAGGGAAATTCAAGTGCCAGAATATGCGATTCTTCGACTTGGTCTCCCCAAGCTGGTCAGCACATTTCCGACCAAACATACAGGGAGCTAAATCCAGCTCCGACGTCAAGTCCTACATCGAGAAGGACGGGGACATTCTCGACTGGGGACAATTTCAGATCGACGGAAGGTCAGCAAGAGGAGGGCAACAGACAGCCAATGACGCTTACGCCGCAGCACTTAACGCGGGAAGTAAGTCGGAGGCTATTAGAGTCATTAAGGAACTGGCTCCTAAAGATTTTGTACTGCAATTTCATAATTTAAATGCAAATTTAAACAGAATCTTTCAGGAGCCACCAGCTCCTTATGTTTCTCCTTTTTCGTCTTCTTCTTTCGATCAAGTTCCAGAAGAACTTGAAGAGTGGGCGTCGGAGAATGTTGTTGACGCCGCTGCGCGGCCCCTTAGACCTCAAAGTATAGTAATTGAGGGAGATAGTCGTACTGGGAAGACTATGTGGGCTAGGTCTTTAGGCCCACACAACTATCTATGTGGGCATTTAGATCTTAGCCCAAAGGTGTACAGTAACGACGCATGGTATAACGTCATTGATGACGTCGATCCGCACTACCTCAAACACTTTAAAGAGTTCATGGGGGCCCAAAGGGACTGGCAATCCAACACAAAGTACGGGAAGCCAGTTCAAATTAAAGGCGGAATACCAACAATCTTCCTCTGCAATCCAGGGCCCAATGCAAGTTATAAAGAGTTCTTAGACGAGGATAAGAACTCAGCATTAAAATCCTGGGCTTTAAAAAATGCAACATTCGTCTTTCTCACCCAACCGCTCTACTCCGGTACCAATCAAAGTTCAACACAGGGAAGCGAAGAGGCGCAACAGGAGGAAACGAGTGGACCTTGA |
|
Protein Sequence
|
MPPRRNGIYSKDYFVTYPKCSLTKEEALSQLLNLQTPTSKKYIRICRELHEDGTPRVRVLIQFEGKFKCQNMRFFDLVSPSWSAHFRPNIQGAKSSSDVKSYIEKDGDILDWGQFQIDGRSARGGQQTANDAYAAALNAGSKSEAIRVIKELAPKDFVLQFHNLNANLNRIFQEPPAPYVSPFSSSSFDQVPEELEEWASENVVDAAARPLRPQSIVIEGDSRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQSNTKYGKPVQIKGGIPTIFLCNPGPNASYKEFLDEDKNSALKSWALKNATFVFLTQPLYSGTNQSSTQGSEEAQQEETSGP |
|
NCBI Accession
|
YP_001955944.1
|
|
Location
|
2092-2430 |
|
Gene Name
|
AC4 |
|
Protein Name
|
AC4 |
|
Coding Region
|
ATGGGACTCCTCGCGTGCGAGTTCTCATCCAGTTCGAAGGGAAATTCAAGTGCCAGAATATGCGATTCTTCGACTTGGTCTCCCCAAGCTGGTCAGCACATTTCCGACCAAACATACAGGGAGCTAAATCCAGCTCCGACGTCAAGTCCTACATCGAGAAGGACGGGGACATTCTCGACTGGGGACAATTTCAGATCGACGGAAGGTCAGCAAGAGGAGGGCAACAGACAGCCAATGACGCTTACGCCGCAGCACTTAACGCGGGAAGTAAGTCGGAGGCTATTAGAGTCATTAAGGAACTGGCTCCTAAAGATTTTGTACTGCAATTTCATAATTTAA |
|
Protein Sequence
|
MGLLACEFSSSSKGNSSARICDSSTWSPQAGQHISDQTYRELNPAPTSSPTSRRTGTFSTGDNFRSTEGQQEEGNRQPMTLTPQHLTREVSRRLLESLRNWLLKILYCNFII |