Malvastrum yellow vein Yunnan virus
Basic Information
| Genus |
Begomovirus
|
| NCBI Assembly |
GCF_000857485.1 |
| Isolate |
China:Yunnan |
| Release date |
2015/2/13 |
| Submitter |
Jiang,T., Zhou,X. |
| Host |
|
| Vector |
|
| Download |
Genome
|GFF3
|PEP
|CDS |
Genomic Organization
JBrowse
Genome
ACCGGATGGCCGCGCAATTTTTTATGGGCCCCCCCACTAACTACTGTCTGCCAATCACATGACGCGCTCAAAGCTTAAATAATTCTCCCGCCTATTATAAGTACTTCGTGCCTAAGTTTCGCTTTGAAAAATGTGGGATCCATTATTAAACGAGTTCCCCGAGACGGTTCACGGGTTTCGGTGCATGCTTTCAATCAAATATCTTCAGTTACTCTCTGAAGGATACTCTCCAGATACGGTTGGTTTCGATCTAATACGTGAGTTAATTTCTATTTTGCGTTCCAGGAATTATGTCGAAGCGTCCTGCAGATATCGTCATTTCTACTCCCGGGTCGAAGGTGCGTCGTCGTCTGAACTTCGACAGCCCTTACTCAACCCGTGCAGCTGTCCCCACTGTCCGCGTCACAAAATCTCGAAGTTGGGCGAACAGGCCCATGAATCGCAAGCCCAGAATGTACAGGATGTATAGAAGCCCTGATGTCCCTAAGGGATGTGAAGGCCCATGTAAGGTCCAATCTTTCGATGCGAAGAACGATATTGGGCATATGGGTAAGGTGATCTGTTTGTCTGACGTTACCCGTGGTATTGGACTTACCCATCGAGTTGGCAAACGTTTCTGTGTCAAGTCACTTTATTTCGTTGGCAAGATATGGATGGATGAAAATATTAAGGTTAAGAATCACACGAACACCGTTTTGTTCTGGATAGTTAGGGATCGACGTCCTACTGGAACGCCTTATGATTTTCAGCAGGTTTTTAATGTTTATGATAATGAGCCTTCCACGGCAACTGTGAAAAACGACCAGCGTGATCGTTTCCAGGTTATCAGGAGGTTCCAGGCAACGGTGACCGGTGGACAATATGCAGCGAAGGAGCAGGCGATTATTAGAAAGTTTTATCGTGTTAATAATTATGTAGTGTATAATCACCAGGAAGCTGGGAAGTATGAGAACCATACTGAAAATGCTTTGTTATTGTATATGGCATGTACCCATGCCTCTAATCCCGTGTATGCTACTTTGAAAGTCAGGAGTTATTTCTATGACTCAGTGACGAATTAATAAATATTAAATTTTATTTCTGAATCCATGTCTACATACATAGTTTGTTCTATTTTTTTCCATAATACATGATTTACAGCTCTAATAATTGAGTTAATTGAAATTACACCTATATTGTTTAGATACTTGAGGACTTGGGTTTTGAATACCCTTAAGAAAAGACCAATCTGAGGGTGTAAGGTCGTCCAGATTCGGTATGTCAGAAAACACTTGTGCACTCCCAGAGCTCTCCGAAGGTTGTAGTTGAATTGGATCCTTATTGTTATGATGTCCATGTTCATCGTGAATGGACGGTTGACGTGGTTGAGGATCTTGAAATAAAGGGGATTTGGAACTTCCCAGATATAGGCGCCACTCCATGCTTGAGCTGCAGTGATGGGTTCCCCTGTGCGTAAATCCATGGTTAAAGCAGTTGATTGACAAATAATAAGAACACCCGCATTCAAGATCTACTCTCTTCCTCCTGTTGCGTCTCTTCGCTTCCCTGTGCTGTACTTTGATTGGAACCTGAGTACAGTGGTCCTTCGAGGGTGACGAAGATCGCATTCTTGATAGCCCAGTTTTTGAGTGCGGTGTTCTTGTCCTCGTCGAGGAATTCTTTATAACTGCTGTTGGGACCAGGATTGCATAGGAAGATTGTCGGTATTCCGCCTTTAATTTGAACTGGCTTCCCGTACTTTGTGTTGGATTGCCAGTCCCTTTGGGCCCCCATGAACTCTTTAAAGTGCTTGAGGAAGTGCGGGTTGACGTCATCAATGATGTTATACCAAGCATCATTGCTGTACACTTTGGGACTTAAGTCTAGATGGCCACACAAATAGTTGTGTGGGCCTAGCGACCTAGCCCACATCGTCTTCCCGGTCCGACTATCTCCCTCGATGACTATACTTTGAGGTCTAAGGGGCCGCGCAGCGGCATCGACAACATTCTCGCACGCCCACTCTTCAAGTTCTTCTGGAACTTGATCAAATGAAGAAGAAGAAAAAGGAGAAACATAAGGAGCTGGTGGCTCTTGAAAATACCTATCTAAATTTGAATTTAAATTATGAAATTGAAGTAGAAAGTCTCTTGGGGCTTTCTCCTTCAATATATTGAGGGCCTGAGCTTTGGACCCTGCGTTGATTGCCTCGGCATATGCGTCGTTGGCAGTCTGGCAACCTCCTCTAGCTGATCTTCCATCGACTTGGAAAATTCCATGATCAAGGATGTCTCCGTCTTTCTCCACGTAGGTTTTGACATCGCTTGAGCTTTTAGCTCCCTGAATGTTTGGATGGAAATGTGCTGACCTGCTTGGGGATGTGAGGTCGAAGAATCTATTGTTTCTACACTGGAATTTCCCTTCGAACTGGATGAGAACATGCAGGTGAGGATTCCCATTTTTATGAAGCTCTCTGCAGATTCTAATGAATTTTATGGAAGTTGGGGTTTGGAGATTTAATAATTGGGAAAGTGCCTCTTCTTTTGTGAGGGAGCACTTGGGATAAGTGAGGAAATAATTTTTGGCATTTATTTTAAACCGATTGGGGGCTGCCATGTTGACTAAGTCAATCGGTGTCTCTCAATTTGCTCTATGTATCGGTGTATTGGAGTCCTATATATATGGAGACCCTAATGGCATAATTGTAATAAAAGAAAAATAATTTGATATTAAAACGAAAAGGCTAAAGCGGCCATCCGTCTAATATT
Gene Information
|
NCBI Accession
|
YP_184750.1
|
|
Location
|
131-469 |
|
Gene Name
|
AV2 |
|
Protein Name
|
AV2 protein |
|
Coding Region
|
ATGTGGGATCCATTATTAAACGAGTTCCCCGAGACGGTTCACGGGTTTCGGTGCATGCTTTCAATCAAATATCTTCAGTTACTCTCTGAAGGATACTCTCCAGATACGGTTGGTTTCGATCTAATACGTGAGTTAATTTCTATTTTGCGTTCCAGGAATTATGTCGAAGCGTCCTGCAGATATCGTCATTTCTACTCCCGGGTCGAAGGTGCGTCGTCGTCTGAACTTCGACAGCCCTTACTCAACCCGTGCAGCTGTCCCCACTGTCCGCGTCACAAAATCTCGAAGTTGGGCGAACAGGCCCATGAATCGCAAGCCCAGAATGTACAGGATGTATAG |
|
Protein Sequence
|
MWDPLLNEFPETVHGFRCMLSIKYLQLLSEGYSPDTVGFDLIRELISILRSRNYVEASCRYRHFYSRVEGASSSELRQPLLNPCSCPHCPRHKISKLGEQAHESQAQNVQDV |
|
NCBI Accession
|
YP_184751.1
|
|
Location
|
291-1061 |
|
Gene Name
|
AV1 |
|
Protein Name
|
coat protein |
|
Coding Region
|
ATGTCGAAGCGTCCTGCAGATATCGTCATTTCTACTCCCGGGTCGAAGGTGCGTCGTCGTCTGAACTTCGACAGCCCTTACTCAACCCGTGCAGCTGTCCCCACTGTCCGCGTCACAAAATCTCGAAGTTGGGCGAACAGGCCCATGAATCGCAAGCCCAGAATGTACAGGATGTATAGAAGCCCTGATGTCCCTAAGGGATGTGAAGGCCCATGTAAGGTCCAATCTTTCGATGCGAAGAACGATATTGGGCATATGGGTAAGGTGATCTGTTTGTCTGACGTTACCCGTGGTATTGGACTTACCCATCGAGTTGGCAAACGTTTCTGTGTCAAGTCACTTTATTTCGTTGGCAAGATATGGATGGATGAAAATATTAAGGTTAAGAATCACACGAACACCGTTTTGTTCTGGATAGTTAGGGATCGACGTCCTACTGGAACGCCTTATGATTTTCAGCAGGTTTTTAATGTTTATGATAATGAGCCTTCCACGGCAACTGTGAAAAACGACCAGCGTGATCGTTTCCAGGTTATCAGGAGGTTCCAGGCAACGGTGACCGGTGGACAATATGCAGCGAAGGAGCAGGCGATTATTAGAAAGTTTTATCGTGTTAATAATTATGTAGTGTATAATCACCAGGAAGCTGGGAAGTATGAGAACCATACTGAAAATGCTTTGTTATTGTATATGGCATGTACCCATGCCTCTAATCCCGTGTATGCTACTTTGAAAGTCAGGAGTTATTTCTATGACTCAGTGACGAATTAA |
|
Protein Sequence
|
MSKRPADIVISTPGSKVRRRLNFDSPYSTRAAVPTVRVTKSRSWANRPMNRKPRMYRMYRSPDVPKGCEGPCKVQSFDAKNDIGHMGKVICLSDVTRGIGLTHRVGKRFCVKSLYFVGKIWMDENIKVKNHTNTVLFWIVRDRRPTGTPYDFQQVFNVYDNEPSTATVKNDQRDRFQVIRRFQATVTGGQYAAKEQAIIRKFYRVNNYVVYNHQEAGKYENHTENALLLYMACTHASNPVYATLKVRSYFYDSVTN |
|
NCBI Accession
|
YP_184752.1
|
|
Location
|
1058-1462 |
|
Gene Name
|
AC3 |
|
Protein Name
|
AC3 protein |
|
Coding Region
|
ATGGATTTACGCACAGGGGAACCCATCACTGCAGCTCAAGCATGGAGTGGCGCCTATATCTGGGAAGTTCCAAATCCCCTTTATTTCAAGATCCTCAACCACGTCAACCGTCCATTCACGATGAACATGGACATCATAACAATAAGGATCCAATTCAACTACAACCTTCGGAGAGCTCTGGGAGTGCACAAGTGTTTTCTGACATACCGAATCTGGACGACCTTACACCCTCAGATTGGTCTTTTCTTAAGGGTATTCAAAACCCAAGTCCTCAAGTATCTAAACAATATAGGTGTAATTTCAATTAACTCAATTATTAGAGCTGTAAATCATGTATTATGGAAAAAAATAGAACAAACTATGTATGTAGACATGGATTCAGAAATAAAATTTAATATTTATTAA |
|
Protein Sequence
|
MDLRTGEPITAAQAWSGAYIWEVPNPLYFKILNHVNRPFTMNMDIITIRIQFNYNLRRALGVHKCFLTYRIWTTLHPQIGLFLRVFKTQVLKYLNNIGVISINSIIRAVNHVLWKKIEQTMYVDMDSEIKFNIY |
|
NCBI Accession
|
YP_184753.1
|
|
Location
|
1155-1607 |
|
Gene Name
|
AC2 |
|
Protein Name
|
AC2 protein |
|
Coding Region
|
ATGCGATCTTCGTCACCCTCGAAGGACCACTGTACTCAGGTTCCAATCAAAGTACAGCACAGGGAAGCGAAGAGACGCAACAGGAGGAAGAGAGTAGATCTTGAATGCGGGTGTTCTTATTATTTGTCAATCAACTGCTTTAACCATGGATTTACGCACAGGGGAACCCATCACTGCAGCTCAAGCATGGAGTGGCGCCTATATCTGGGAAGTTCCAAATCCCCTTTATTTCAAGATCCTCAACCACGTCAACCGTCCATTCACGATGAACATGGACATCATAACAATAAGGATCCAATTCAACTACAACCTTCGGAGAGCTCTGGGAGTGCACAAGTGTTTTCTGACATACCGAATCTGGACGACCTTACACCCTCAGATTGGTCTTTTCTTAAGGGTATTCAAAACCCAAGTCCTCAAGTATCTAAACAATATAGGTGTAATTTCAATTAA |
|
Protein Sequence
|
MRSSSPSKDHCTQVPIKVQHREAKRRNRRKRVDLECGCSYYLSINCFNHGFTHRGTHHCSSSMEWRLYLGSSKSPLFQDPQPRQPSIHDEHGHHNNKDPIQLQPSESSGSAQVFSDIPNLDDLTPSDWSFLKGIQNPSPQVSKQYRCNFN |
|
NCBI Accession
|
YP_184754.1
|
|
Location
|
1504-2595 |
|
Gene Name
|
AC1 |
|
Protein Name
|
Rep protein |
|
Coding Region
|
ATGGCAGCCCCCAATCGGTTTAAAATAAATGCCAAAAATTATTTCCTCACTTATCCCAAGTGCTCCCTCACAAAAGAAGAGGCACTTTCCCAATTATTAAATCTCCAAACCCCAACTTCCATAAAATTCATTAGAATCTGCAGAGAGCTTCATAAAAATGGGAATCCTCACCTGCATGTTCTCATCCAGTTCGAAGGGAAATTCCAGTGTAGAAACAATAGATTCTTCGACCTCACATCCCCAAGCAGGTCAGCACATTTCCATCCAAACATTCAGGGAGCTAAAAGCTCAAGCGATGTCAAAACCTACGTGGAGAAAGACGGAGACATCCTTGATCATGGAATTTTCCAAGTCGATGGAAGATCAGCTAGAGGAGGTTGCCAGACTGCCAACGACGCATATGCCGAGGCAATCAACGCAGGGTCCAAAGCTCAGGCCCTCAATATATTGAAGGAGAAAGCCCCAAGAGACTTTCTACTTCAATTTCATAATTTAAATTCAAATTTAGATAGGTATTTTCAAGAGCCACCAGCTCCTTATGTTTCTCCTTTTTCTTCTTCTTCATTTGATCAAGTTCCAGAAGAACTTGAAGAGTGGGCGTGCGAGAATGTTGTCGATGCCGCTGCGCGGCCCCTTAGACCTCAAAGTATAGTCATCGAGGGAGATAGTCGGACCGGGAAGACGATGTGGGCTAGGTCGCTAGGCCCACACAACTATTTGTGTGGCCATCTAGACTTAAGTCCCAAAGTGTACAGCAATGATGCTTGGTATAACATCATTGATGACGTCAACCCGCACTTCCTCAAGCACTTTAAAGAGTTCATGGGGGCCCAAAGGGACTGGCAATCCAACACAAAGTACGGGAAGCCAGTTCAAATTAAAGGCGGAATACCGACAATCTTCCTATGCAATCCTGGTCCCAACAGCAGTTATAAAGAATTCCTCGACGAGGACAAGAACACCGCACTCAAAAACTGGGCTATCAAGAATGCGATCTTCGTCACCCTCGAAGGACCACTGTACTCAGGTTCCAATCAAAGTACAGCACAGGGAAGCGAAGAGACGCAACAGGAGGAAGAGAGTAGATCTTGA |
|
Protein Sequence
|
MAAPNRFKINAKNYFLTYPKCSLTKEEALSQLLNLQTPTSIKFIRICRELHKNGNPHLHVLIQFEGKFQCRNNRFFDLTSPSRSAHFHPNIQGAKSSSDVKTYVEKDGDILDHGIFQVDGRSARGGCQTANDAYAEAINAGSKAQALNILKEKAPRDFLLQFHNLNSNLDRYFQEPPAPYVSPFSSSSFDQVPEELEEWACENVVDAAARPLRPQSIVIEGDSRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNIIDDVNPHFLKHFKEFMGAQRDWQSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLDEDKNTALKNWAIKNAIFVTLEGPLYSGSNQSTAQGSEETQQEEESRS |
|
NCBI Accession
|
YP_184755.1
|
|
Location
|
2145-2438 |
|
Gene Name
|
AC4 |
|
Protein Name
|
AC4 protein |
|
Coding Region
|
ATGGGAATCCTCACCTGCATGTTCTCATCCAGTTCGAAGGGAAATTCCAGTGTAGAAACAATAGATTCTTCGACCTCACATCCCCAAGCAGGTCAGCACATTTCCATCCAAACATTCAGGGAGCTAAAAGCTCAAGCGATGTCAAAACCTACGTGGAGAAAGACGGAGACATCCTTGATCATGGAATTTTCCAAGTCGATGGAAGATCAGCTAGAGGAGGTTGCCAGACTGCCAACGACGCATATGCCGAGGCAATCAACGCAGGGTCCAAAGCTCAGGCCCTCAATATATTGA |
|
Protein Sequence
|
MGILTCMFSSSSKGNSSVETIDSSTSHPQAGQHISIQTFRELKAQAMSKPTWRKTETSLIMEFSKSMEDQLEEVARLPTTHMPRQSTQGPKLRPSIY |