Malvastrum yellow vein Yunnan virus

Basic Information

Genus Begomovirus
NCBI Assembly GCF_000857485.1
Isolate China:Yunnan
Release date 2015/2/13
Submitter Jiang,T., Zhou,X.
Host
Vector
Download Genome |GFF3 |PEP |CDS

Genomic Organization

JBrowse

Genome

NC_006631
ACCGGATGGCCGCGCAATTTTTTATGGGCCCCCCCACTAACTACTGTCTGCCAATCACATGACGCGCTCAAAGCTTAAATAATTCTCCCGCCTATTATAAGTACTTCGTGCCTAAGTTTCGCTTTGAAAAATGTGGGATCCATTATTAAACGAGTTCCCCGAGACGGTTCACGGGTTTCGGTGCATGCTTTCAATCAAATATCTTCAGTTACTCTCTGAAGGATACTCTCCAGATACGGTTGGTTTCGATCTAATACGTGAGTTAATTTCTATTTTGCGTTCCAGGAATTATGTCGAAGCGTCCTGCAGATATCGTCATTTCTACTCCCGGGTCGAAGGTGCGTCGTCGTCTGAACTTCGACAGCCCTTACTCAACCCGTGCAGCTGTCCCCACTGTCCGCGTCACAAAATCTCGAAGTTGGGCGAACAGGCCCATGAATCGCAAGCCCAGAATGTACAGGATGTATAGAAGCCCTGATGTCCCTAAGGGATGTGAAGGCCCATGTAAGGTCCAATCTTTCGATGCGAAGAACGATATTGGGCATATGGGTAAGGTGATCTGTTTGTCTGACGTTACCCGTGGTATTGGACTTACCCATCGAGTTGGCAAACGTTTCTGTGTCAAGTCACTTTATTTCGTTGGCAAGATATGGATGGATGAAAATATTAAGGTTAAGAATCACACGAACACCGTTTTGTTCTGGATAGTTAGGGATCGACGTCCTACTGGAACGCCTTATGATTTTCAGCAGGTTTTTAATGTTTATGATAATGAGCCTTCCACGGCAACTGTGAAAAACGACCAGCGTGATCGTTTCCAGGTTATCAGGAGGTTCCAGGCAACGGTGACCGGTGGACAATATGCAGCGAAGGAGCAGGCGATTATTAGAAAGTTTTATCGTGTTAATAATTATGTAGTGTATAATCACCAGGAAGCTGGGAAGTATGAGAACCATACTGAAAATGCTTTGTTATTGTATATGGCATGTACCCATGCCTCTAATCCCGTGTATGCTACTTTGAAAGTCAGGAGTTATTTCTATGACTCAGTGACGAATTAATAAATATTAAATTTTATTTCTGAATCCATGTCTACATACATAGTTTGTTCTATTTTTTTCCATAATACATGATTTACAGCTCTAATAATTGAGTTAATTGAAATTACACCTATATTGTTTAGATACTTGAGGACTTGGGTTTTGAATACCCTTAAGAAAAGACCAATCTGAGGGTGTAAGGTCGTCCAGATTCGGTATGTCAGAAAACACTTGTGCACTCCCAGAGCTCTCCGAAGGTTGTAGTTGAATTGGATCCTTATTGTTATGATGTCCATGTTCATCGTGAATGGACGGTTGACGTGGTTGAGGATCTTGAAATAAAGGGGATTTGGAACTTCCCAGATATAGGCGCCACTCCATGCTTGAGCTGCAGTGATGGGTTCCCCTGTGCGTAAATCCATGGTTAAAGCAGTTGATTGACAAATAATAAGAACACCCGCATTCAAGATCTACTCTCTTCCTCCTGTTGCGTCTCTTCGCTTCCCTGTGCTGTACTTTGATTGGAACCTGAGTACAGTGGTCCTTCGAGGGTGACGAAGATCGCATTCTTGATAGCCCAGTTTTTGAGTGCGGTGTTCTTGTCCTCGTCGAGGAATTCTTTATAACTGCTGTTGGGACCAGGATTGCATAGGAAGATTGTCGGTATTCCGCCTTTAATTTGAACTGGCTTCCCGTACTTTGTGTTGGATTGCCAGTCCCTTTGGGCCCCCATGAACTCTTTAAAGTGCTTGAGGAAGTGCGGGTTGACGTCATCAATGATGTTATACCAAGCATCATTGCTGTACACTTTGGGACTTAAGTCTAGATGGCCACACAAATAGTTGTGTGGGCCTAGCGACCTAGCCCACATCGTCTTCCCGGTCCGACTATCTCCCTCGATGACTATACTTTGAGGTCTAAGGGGCCGCGCAGCGGCATCGACAACATTCTCGCACGCCCACTCTTCAAGTTCTTCTGGAACTTGATCAAATGAAGAAGAAGAAAAAGGAGAAACATAAGGAGCTGGTGGCTCTTGAAAATACCTATCTAAATTTGAATTTAAATTATGAAATTGAAGTAGAAAGTCTCTTGGGGCTTTCTCCTTCAATATATTGAGGGCCTGAGCTTTGGACCCTGCGTTGATTGCCTCGGCATATGCGTCGTTGGCAGTCTGGCAACCTCCTCTAGCTGATCTTCCATCGACTTGGAAAATTCCATGATCAAGGATGTCTCCGTCTTTCTCCACGTAGGTTTTGACATCGCTTGAGCTTTTAGCTCCCTGAATGTTTGGATGGAAATGTGCTGACCTGCTTGGGGATGTGAGGTCGAAGAATCTATTGTTTCTACACTGGAATTTCCCTTCGAACTGGATGAGAACATGCAGGTGAGGATTCCCATTTTTATGAAGCTCTCTGCAGATTCTAATGAATTTTATGGAAGTTGGGGTTTGGAGATTTAATAATTGGGAAAGTGCCTCTTCTTTTGTGAGGGAGCACTTGGGATAAGTGAGGAAATAATTTTTGGCATTTATTTTAAACCGATTGGGGGCTGCCATGTTGACTAAGTCAATCGGTGTCTCTCAATTTGCTCTATGTATCGGTGTATTGGAGTCCTATATATATGGAGACCCTAATGGCATAATTGTAATAAAAGAAAAATAATTTGATATTAAAACGAAAAGGCTAAAGCGGCCATCCGTCTAATATT

Gene Information

NCBI Accession YP_184750.1
Location 131-469
Gene Name AV2
Protein Name AV2 protein
Coding Region ATGTGGGATCCATTATTAAACGAGTTCCCCGAGACGGTTCACGGGTTTCGGTGCATGCTTTCAATCAAATATCTTCAGTTACTCTCTGAAGGATACTCTCCAGATACGGTTGGTTTCGATCTAATACGTGAGTTAATTTCTATTTTGCGTTCCAGGAATTATGTCGAAGCGTCCTGCAGATATCGTCATTTCTACTCCCGGGTCGAAGGTGCGTCGTCGTCTGAACTTCGACAGCCCTTACTCAACCCGTGCAGCTGTCCCCACTGTCCGCGTCACAAAATCTCGAAGTTGGGCGAACAGGCCCATGAATCGCAAGCCCAGAATGTACAGGATGTATAG
Protein Sequence MWDPLLNEFPETVHGFRCMLSIKYLQLLSEGYSPDTVGFDLIRELISILRSRNYVEASCRYRHFYSRVEGASSSELRQPLLNPCSCPHCPRHKISKLGEQAHESQAQNVQDV

NCBI Accession YP_184751.1
Location 291-1061
Gene Name AV1
Protein Name coat protein
Coding Region ATGTCGAAGCGTCCTGCAGATATCGTCATTTCTACTCCCGGGTCGAAGGTGCGTCGTCGTCTGAACTTCGACAGCCCTTACTCAACCCGTGCAGCTGTCCCCACTGTCCGCGTCACAAAATCTCGAAGTTGGGCGAACAGGCCCATGAATCGCAAGCCCAGAATGTACAGGATGTATAGAAGCCCTGATGTCCCTAAGGGATGTGAAGGCCCATGTAAGGTCCAATCTTTCGATGCGAAGAACGATATTGGGCATATGGGTAAGGTGATCTGTTTGTCTGACGTTACCCGTGGTATTGGACTTACCCATCGAGTTGGCAAACGTTTCTGTGTCAAGTCACTTTATTTCGTTGGCAAGATATGGATGGATGAAAATATTAAGGTTAAGAATCACACGAACACCGTTTTGTTCTGGATAGTTAGGGATCGACGTCCTACTGGAACGCCTTATGATTTTCAGCAGGTTTTTAATGTTTATGATAATGAGCCTTCCACGGCAACTGTGAAAAACGACCAGCGTGATCGTTTCCAGGTTATCAGGAGGTTCCAGGCAACGGTGACCGGTGGACAATATGCAGCGAAGGAGCAGGCGATTATTAGAAAGTTTTATCGTGTTAATAATTATGTAGTGTATAATCACCAGGAAGCTGGGAAGTATGAGAACCATACTGAAAATGCTTTGTTATTGTATATGGCATGTACCCATGCCTCTAATCCCGTGTATGCTACTTTGAAAGTCAGGAGTTATTTCTATGACTCAGTGACGAATTAA
Protein Sequence MSKRPADIVISTPGSKVRRRLNFDSPYSTRAAVPTVRVTKSRSWANRPMNRKPRMYRMYRSPDVPKGCEGPCKVQSFDAKNDIGHMGKVICLSDVTRGIGLTHRVGKRFCVKSLYFVGKIWMDENIKVKNHTNTVLFWIVRDRRPTGTPYDFQQVFNVYDNEPSTATVKNDQRDRFQVIRRFQATVTGGQYAAKEQAIIRKFYRVNNYVVYNHQEAGKYENHTENALLLYMACTHASNPVYATLKVRSYFYDSVTN

NCBI Accession YP_184752.1
Location 1058-1462
Gene Name AC3
Protein Name AC3 protein
Coding Region ATGGATTTACGCACAGGGGAACCCATCACTGCAGCTCAAGCATGGAGTGGCGCCTATATCTGGGAAGTTCCAAATCCCCTTTATTTCAAGATCCTCAACCACGTCAACCGTCCATTCACGATGAACATGGACATCATAACAATAAGGATCCAATTCAACTACAACCTTCGGAGAGCTCTGGGAGTGCACAAGTGTTTTCTGACATACCGAATCTGGACGACCTTACACCCTCAGATTGGTCTTTTCTTAAGGGTATTCAAAACCCAAGTCCTCAAGTATCTAAACAATATAGGTGTAATTTCAATTAACTCAATTATTAGAGCTGTAAATCATGTATTATGGAAAAAAATAGAACAAACTATGTATGTAGACATGGATTCAGAAATAAAATTTAATATTTATTAA
Protein Sequence MDLRTGEPITAAQAWSGAYIWEVPNPLYFKILNHVNRPFTMNMDIITIRIQFNYNLRRALGVHKCFLTYRIWTTLHPQIGLFLRVFKTQVLKYLNNIGVISINSIIRAVNHVLWKKIEQTMYVDMDSEIKFNIY

NCBI Accession YP_184753.1
Location 1155-1607
Gene Name AC2
Protein Name AC2 protein
Coding Region ATGCGATCTTCGTCACCCTCGAAGGACCACTGTACTCAGGTTCCAATCAAAGTACAGCACAGGGAAGCGAAGAGACGCAACAGGAGGAAGAGAGTAGATCTTGAATGCGGGTGTTCTTATTATTTGTCAATCAACTGCTTTAACCATGGATTTACGCACAGGGGAACCCATCACTGCAGCTCAAGCATGGAGTGGCGCCTATATCTGGGAAGTTCCAAATCCCCTTTATTTCAAGATCCTCAACCACGTCAACCGTCCATTCACGATGAACATGGACATCATAACAATAAGGATCCAATTCAACTACAACCTTCGGAGAGCTCTGGGAGTGCACAAGTGTTTTCTGACATACCGAATCTGGACGACCTTACACCCTCAGATTGGTCTTTTCTTAAGGGTATTCAAAACCCAAGTCCTCAAGTATCTAAACAATATAGGTGTAATTTCAATTAA
Protein Sequence MRSSSPSKDHCTQVPIKVQHREAKRRNRRKRVDLECGCSYYLSINCFNHGFTHRGTHHCSSSMEWRLYLGSSKSPLFQDPQPRQPSIHDEHGHHNNKDPIQLQPSESSGSAQVFSDIPNLDDLTPSDWSFLKGIQNPSPQVSKQYRCNFN

NCBI Accession YP_184754.1
Location 1504-2595
Gene Name AC1
Protein Name Rep protein
Coding Region ATGGCAGCCCCCAATCGGTTTAAAATAAATGCCAAAAATTATTTCCTCACTTATCCCAAGTGCTCCCTCACAAAAGAAGAGGCACTTTCCCAATTATTAAATCTCCAAACCCCAACTTCCATAAAATTCATTAGAATCTGCAGAGAGCTTCATAAAAATGGGAATCCTCACCTGCATGTTCTCATCCAGTTCGAAGGGAAATTCCAGTGTAGAAACAATAGATTCTTCGACCTCACATCCCCAAGCAGGTCAGCACATTTCCATCCAAACATTCAGGGAGCTAAAAGCTCAAGCGATGTCAAAACCTACGTGGAGAAAGACGGAGACATCCTTGATCATGGAATTTTCCAAGTCGATGGAAGATCAGCTAGAGGAGGTTGCCAGACTGCCAACGACGCATATGCCGAGGCAATCAACGCAGGGTCCAAAGCTCAGGCCCTCAATATATTGAAGGAGAAAGCCCCAAGAGACTTTCTACTTCAATTTCATAATTTAAATTCAAATTTAGATAGGTATTTTCAAGAGCCACCAGCTCCTTATGTTTCTCCTTTTTCTTCTTCTTCATTTGATCAAGTTCCAGAAGAACTTGAAGAGTGGGCGTGCGAGAATGTTGTCGATGCCGCTGCGCGGCCCCTTAGACCTCAAAGTATAGTCATCGAGGGAGATAGTCGGACCGGGAAGACGATGTGGGCTAGGTCGCTAGGCCCACACAACTATTTGTGTGGCCATCTAGACTTAAGTCCCAAAGTGTACAGCAATGATGCTTGGTATAACATCATTGATGACGTCAACCCGCACTTCCTCAAGCACTTTAAAGAGTTCATGGGGGCCCAAAGGGACTGGCAATCCAACACAAAGTACGGGAAGCCAGTTCAAATTAAAGGCGGAATACCGACAATCTTCCTATGCAATCCTGGTCCCAACAGCAGTTATAAAGAATTCCTCGACGAGGACAAGAACACCGCACTCAAAAACTGGGCTATCAAGAATGCGATCTTCGTCACCCTCGAAGGACCACTGTACTCAGGTTCCAATCAAAGTACAGCACAGGGAAGCGAAGAGACGCAACAGGAGGAAGAGAGTAGATCTTGA
Protein Sequence MAAPNRFKINAKNYFLTYPKCSLTKEEALSQLLNLQTPTSIKFIRICRELHKNGNPHLHVLIQFEGKFQCRNNRFFDLTSPSRSAHFHPNIQGAKSSSDVKTYVEKDGDILDHGIFQVDGRSARGGCQTANDAYAEAINAGSKAQALNILKEKAPRDFLLQFHNLNSNLDRYFQEPPAPYVSPFSSSSFDQVPEELEEWACENVVDAAARPLRPQSIVIEGDSRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNIIDDVNPHFLKHFKEFMGAQRDWQSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLDEDKNTALKNWAIKNAIFVTLEGPLYSGSNQSTAQGSEETQQEEESRS

NCBI Accession YP_184755.1
Location 2145-2438
Gene Name AC4
Protein Name AC4 protein
Coding Region ATGGGAATCCTCACCTGCATGTTCTCATCCAGTTCGAAGGGAAATTCCAGTGTAGAAACAATAGATTCTTCGACCTCACATCCCCAAGCAGGTCAGCACATTTCCATCCAAACATTCAGGGAGCTAAAAGCTCAAGCGATGTCAAAACCTACGTGGAGAAAGACGGAGACATCCTTGATCATGGAATTTTCCAAGTCGATGGAAGATCAGCTAGAGGAGGTTGCCAGACTGCCAACGACGCATATGCCGAGGCAATCAACGCAGGGTCCAAAGCTCAGGCCCTCAATATATTGA
Protein Sequence MGILTCMFSSSSKGNSSVETIDSSTSHPQAGQHISIQTFRELKAQAMSKPTWRKTETSLIMEFSKSMEDQLEEVARLPTTHMPRQSTQGPKLRPSIY

References More References in PubMed

1

Malvastrum yellow vein Yunnan virus is amonopartite begomovirus.

Jiang T, et al.  Acta Virol. 2010;54(1):21-6. doi: 10.4149/av_2010_01_21.

PMID: 20201610
2

Identification of a novel pepper-infecting monopartite begomovirus in China.

Li P, et al.  Arch Virol. 2021 Jun;166(6):1751-1754. doi: 10.1007/s00705-021-04989-0. Epub 2021 Mar 20.

PMID: 33743050
3

Molecular characterization of a distinct begomovirus species and its associated satellite DNA isolated from Malvastrum coromandelianum in China.

Jiang T, et al.  Virus Genes. 2005 Aug;31(1):43-8. doi: 10.1007/s11262-004-2198-z.

PMID: 15965607