Malvastrum yellow vein virus
Basic Information
| Genus |
Begomovirus
|
| NCBI Assembly |
GCF_000842105.1 |
| Isolate |
China:Yunnan |
| Release date |
2015/2/12 |
| Submitter |
Zhou,X., Xie,Y., Peng,Y., Zhang,Z. |
| Host |
|
| Vector |
|
| Download |
Genome
|GFF3
|PEP
|CDS |
Genomic Organization
JBrowse
Genome
ACCGGATGGCCGCGCGATTTTTTGGTGGGCCCTAAACCAATGGTATGACGCGCTGAAAGCTTAAATAACTCTCCCCCCTTATAAATACTTCGGGCCTAAGTATCCGATTTGAAAATGTGGGATCCACTTGTAAACGAGTTCCCCGAGACGGTTCACGGGTTTCGGTGCATGATTTCTATCAAATATCTGCAGTTACTCTCTGAAGGATACTCCCCAGATACTGTTGGTTACGATCTAATACGTGAATTAATTTCTATTTTGCGTTCCAGGAATTATGTCGAAGCGTCCTGCAGATATCGTCATTTCTACCCCCGCGTCGAAGGTGCGTCGTCGTCTGAACTTCGACAGCCCTTACTCAACCCGTGTAACTGTCCCCACTGTCCGCGCCACAAAATCTCGAATGTGGGCGAACAGGCCCATGAACCGCAAACCCAGAATGTACAGGATGTACAGAAGTCCTGATGTTCCACGAGGCTGTGAAGGTCCATGTAAGGTCCAGTCCTTTGAGTCTAGACACGATGTAGTCCATATAGGGAAGGTTATGTGTATTAGTGATGTTACTCGCGGTACTGGGTTGACCCATAGAGTTGGTAAGCGTTTCTGTGTAAAGTCAGTTTATGTGTTGGGTAAGATTTGGATGGATGAAAATATCAAGAGCAAGAATCACACGAACAATGTGATGTTCTTTCTTGTCCGAGATCGACGTCCTACCGGCACGCCTCAGGATTTTGGAGATGTCTTTAACATGTTTGATAACGAGCCTAGCACCGCTACTGTGAAGAATATGCATCGAGATCGTTACCAGGTCGTAAGGAAGTGGTATGCAACTGTTACTGGTGGACAGTATGGAGCAAAGGAACAGGCTTTGGTTAAGAAGTTTGTTAGGGTTAATAATTATGTTGTTTACAACCAGCAAGAGGCTGGGAAGTACGAGAATCATTCCGAGAATGCCTTGATGTTGTATATGGCATGTACCCATGCCTCTAATCCTGTGTACGCTACCCTTAAGATTAGGATTTACTTCTACGATTCTGTAACCAACTGATATTAATAAAGATTGAATTTTATTTCTGAAGTCATGTCTACATACATAGTTTGCTCTATCCTTTTCCATAACACATGATTTATAGCTCTAATAATTGCGTTAATCGAGATTACACCGAGATTTGTGAGATACTTGAGGACTTGGGTTTTGAATACCCTTAAGAAAAGACCAGTCCGAGGGTGTAAGATCGTCCAGATTCGGTAGGTCAGAAAACACTTGTGCACTCCCAGAGCTCTCCGAAGGTTGTAGTTGAATTGGATCCTGATTGTTATGATGTCCATGTTCATCGTGAATGGCCGGTTGTCGTGGCTGAGGATCTTGAAATAGAGGGGATTTGGAAGCTCCCAGATATAGGCGCCACTCCATGCTTGAGCTGCAGTGATGGGTTCCCCTGTGCGTAAATCCATGGTTGCAGCAGTTTATTGATAGAAAATAAGAACACCCGCATTCAAGATCGACTCTCCTCCTCCTGTTGCGTTTCTTCGCTTCCCTGTGCTGTACTTTGATTGGAACCTGAGTACAGTGGTCCTTGGAGGGTGACGAAGATCGCATTCTTGAGAGCCCAATTCTTTAGTGCTGTGTCTTTCTCGTCGAGGAATTCTTTATAGCTGCTATTGGGACCAGGATTGCATAGGAAGATTGTCGGTATCCCGCCTTTAATTTGAACTGGCTTCCCGTATTTTGTGTTGGATTGCCAGTCCCTTTGGGCCCCCATGAACTCCTTAAAGTGCTTAAGAAAGTGCGGGTCGACGTCATCAATGACGTTGTACCATGCGTCGTTGCTGTAGACCTTTGGACTCAGATCTAGATGCCCACACAGATAGTTATGTGGGCCTAGTGACCTGGCCCACATTGTCTTCCCGGTTCGACTATCTCCCTCGATGACTATACTTTGAGGTCTAAGGGGCCGCGCAGCGGCATCGACGACATTCTCGCACGCCCACGCTTCAAGTTCTTCTGGAACTTGATCGAAAGAAGAAGATAAAAAAGGAGAAATATATTCCTCTAGTGGAGGAGTAAAAATCCTATCTAAATTACTATTTAAATTATGAAACTGTAAAACAAAATCTTTAGGAGCCTTCTCCTTTAATATATTGAGGGCCGCTGCTTTGGACCCTGAATTGATTGCCTCGGCATATGCGTCGTTGGCAGATTGGCAACCTCCTCTAGCTGATCGTCCATCGACTTGGAAAATTCCATGATCAAGGATGTCTCCGTCTTTCTTAATGTAGGTTTTGACATCGCTTGAGCTTTTAGCTCCCTGAATGTTTGGATGGAAATGTGCTGACCTGCTTGGGGATGTGAGGTCAAAGAATCTGTTGTTTTGGCATTTGAATTTTCCTTCGAACTGGATGAGAACATGCAAGTGAGGAGTCCCATTTTCATGAAGCTCTCTGCAGATTCTAATGAATTTTATGGAAGTGGGGGTTTGGAGATTTAAGAATTGGGAAAGTGCCTCTTCTTTAGTAAGGGAGCATTTGGGATAAGTGAGGAAATAATTTTTGGCATTTATAAGAAATTTCTTTGGTTGAGGCATGTTGACTTGGTCAATCGGGTCCTCTCAAACTTGGCTATGCAATCGGGGAATGGGTCCTTATTTATAGTTCAGGACCTAAATGGCATAATTGTAAATATGTGTTAGATGATCAAATTTCAAAATCCAAAAGCGGCCATCCGTATAATATT
Gene Information
|
NCBI Accession
|
NP_808730.1
|
|
Location
|
115-462 |
|
Gene Name
|
AV2 |
|
Protein Name
|
precoat protein |
|
Coding Region
|
ATGTGGGATCCACTTGTAAACGAGTTCCCCGAGACGGTTCACGGGTTTCGGTGCATGATTTCTATCAAATATCTGCAGTTACTCTCTGAAGGATACTCCCCAGATACTGTTGGTTACGATCTAATACGTGAATTAATTTCTATTTTGCGTTCCAGGAATTATGTCGAAGCGTCCTGCAGATATCGTCATTTCTACCCCCGCGTCGAAGGTGCGTCGTCGTCTGAACTTCGACAGCCCTTACTCAACCCGTGTAACTGTCCCCACTGTCCGCGCCACAAAATCTCGAATGTGGGCGAACAGGCCCATGAACCGCAAACCCAGAATGTACAGGATGTACAGAAGTCCTGA |
|
Protein Sequence
|
MWDPLVNEFPETVHGFRCMISIKYLQLLSEGYSPDTVGYDLIRELISILRSRNYVEASCRYRHFYPRVEGASSSELRQPLLNPCNCPHCPRHKISNVGEQAHEPQTQNVQDVQKS |
|
NCBI Accession
|
NP_808731.1
|
|
Location
|
275-1045 |
|
Gene Name
|
AV1 |
|
Protein Name
|
coat protein |
|
Coding Region
|
ATGTCGAAGCGTCCTGCAGATATCGTCATTTCTACCCCCGCGTCGAAGGTGCGTCGTCGTCTGAACTTCGACAGCCCTTACTCAACCCGTGTAACTGTCCCCACTGTCCGCGCCACAAAATCTCGAATGTGGGCGAACAGGCCCATGAACCGCAAACCCAGAATGTACAGGATGTACAGAAGTCCTGATGTTCCACGAGGCTGTGAAGGTCCATGTAAGGTCCAGTCCTTTGAGTCTAGACACGATGTAGTCCATATAGGGAAGGTTATGTGTATTAGTGATGTTACTCGCGGTACTGGGTTGACCCATAGAGTTGGTAAGCGTTTCTGTGTAAAGTCAGTTTATGTGTTGGGTAAGATTTGGATGGATGAAAATATCAAGAGCAAGAATCACACGAACAATGTGATGTTCTTTCTTGTCCGAGATCGACGTCCTACCGGCACGCCTCAGGATTTTGGAGATGTCTTTAACATGTTTGATAACGAGCCTAGCACCGCTACTGTGAAGAATATGCATCGAGATCGTTACCAGGTCGTAAGGAAGTGGTATGCAACTGTTACTGGTGGACAGTATGGAGCAAAGGAACAGGCTTTGGTTAAGAAGTTTGTTAGGGTTAATAATTATGTTGTTTACAACCAGCAAGAGGCTGGGAAGTACGAGAATCATTCCGAGAATGCCTTGATGTTGTATATGGCATGTACCCATGCCTCTAATCCTGTGTACGCTACCCTTAAGATTAGGATTTACTTCTACGATTCTGTAACCAACTGA |
|
Protein Sequence
|
MSKRPADIVISTPASKVRRRLNFDSPYSTRVTVPTVRATKSRMWANRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDVVHIGKVMCISDVTRGTGLTHRVGKRFCVKSVYVLGKIWMDENIKSKNHTNNVMFFLVRDRRPTGTPQDFGDVFNMFDNEPSTATVKNMHRDRYQVVRKWYATVTGGQYGAKEQALVKKFVRVNNYVVYNQQEAGKYENHSENALMLYMACTHASNPVYATLKIRIYFYDSVTN |
|
NCBI Accession
|
NP_808732.1
|
|
Location
|
1048-1452 |
|
Gene Name
|
AC3 |
|
Protein Name
|
replication enhancer protein |
|
Coding Region
|
ATGGATTTACGCACAGGGGAACCCATCACTGCAGCTCAAGCATGGAGTGGCGCCTATATCTGGGAGCTTCCAAATCCCCTCTATTTCAAGATCCTCAGCCACGACAACCGGCCATTCACGATGAACATGGACATCATAACAATCAGGATCCAATTCAACTACAACCTTCGGAGAGCTCTGGGAGTGCACAAGTGTTTTCTGACCTACCGAATCTGGACGATCTTACACCCTCGGACTGGTCTTTTCTTAAGGGTATTCAAAACCCAAGTCCTCAAGTATCTCACAAATCTCGGTGTAATCTCGATTAACGCAATTATTAGAGCTATAAATCATGTGTTATGGAAAAGGATAGAGCAAACTATGTATGTAGACATGACTTCAGAAATAAAATTCAATCTTTATTAA |
|
Protein Sequence
|
MDLRTGEPITAAQAWSGAYIWELPNPLYFKILSHDNRPFTMNMDIITIRIQFNYNLRRALGVHKCFLTYRIWTILHPRTGLFLRVFKTQVLKYLTNLGVISINAIIRAINHVLWKRIEQTMYVDMTSEIKFNLY |
|
NCBI Accession
|
NP_808733.1
|
|
Location
|
1145-1597 |
|
Gene Name
|
AC2 |
|
Protein Name
|
transcriptional activator protein |
|
Coding Region
|
ATGCGATCTTCGTCACCCTCCAAGGACCACTGTACTCAGGTTCCAATCAAAGTACAGCACAGGGAAGCGAAGAAACGCAACAGGAGGAGGAGAGTCGATCTTGAATGCGGGTGTTCTTATTTTCTATCAATAAACTGCTGCAACCATGGATTTACGCACAGGGGAACCCATCACTGCAGCTCAAGCATGGAGTGGCGCCTATATCTGGGAGCTTCCAAATCCCCTCTATTTCAAGATCCTCAGCCACGACAACCGGCCATTCACGATGAACATGGACATCATAACAATCAGGATCCAATTCAACTACAACCTTCGGAGAGCTCTGGGAGTGCACAAGTGTTTTCTGACCTACCGAATCTGGACGATCTTACACCCTCGGACTGGTCTTTTCTTAAGGGTATTCAAAACCCAAGTCCTCAAGTATCTCACAAATCTCGGTGTAATCTCGATTAA |
|
Protein Sequence
|
MRSSSPSKDHCTQVPIKVQHREAKKRNRRRRVDLECGCSYFLSINCCNHGFTHRGTHHCSSSMEWRLYLGASKSPLFQDPQPRQPAIHDEHGHHNNQDPIQLQPSESSGSAQVFSDLPNLDDLTPSDWSFLKGIQNPSPQVSHKSRCNLD |
|
NCBI Accession
|
NP_808734.1
|
|
Location
|
1494-2582 |
|
Gene Name
|
AC1 |
|
Protein Name
|
Rep protein |
|
Coding Region
|
ATGCCTCAACCAAAGAAATTTCTTATAAATGCCAAAAATTATTTCCTCACTTATCCCAAATGCTCCCTTACTAAAGAAGAGGCACTTTCCCAATTCTTAAATCTCCAAACCCCCACTTCCATAAAATTCATTAGAATCTGCAGAGAGCTTCATGAAAATGGGACTCCTCACTTGCATGTTCTCATCCAGTTCGAAGGAAAATTCAAATGCCAAAACAACAGATTCTTTGACCTCACATCCCCAAGCAGGTCAGCACATTTCCATCCAAACATTCAGGGAGCTAAAAGCTCAAGCGATGTCAAAACCTACATTAAGAAAGACGGAGACATCCTTGATCATGGAATTTTCCAAGTCGATGGACGATCAGCTAGAGGAGGTTGCCAATCTGCCAACGACGCATATGCCGAGGCAATCAATTCAGGGTCCAAAGCAGCGGCCCTCAATATATTAAAGGAGAAGGCTCCTAAAGATTTTGTTTTACAGTTTCATAATTTAAATAGTAATTTAGATAGGATTTTTACTCCTCCACTAGAGGAATATATTTCTCCTTTTTTATCTTCTTCTTTCGATCAAGTTCCAGAAGAACTTGAAGCGTGGGCGTGCGAGAATGTCGTCGATGCCGCTGCGCGGCCCCTTAGACCTCAAAGTATAGTCATCGAGGGAGATAGTCGAACCGGGAAGACAATGTGGGCCAGGTCACTAGGCCCACATAACTATCTGTGTGGGCATCTAGATCTGAGTCCAAAGGTCTACAGCAACGACGCATGGTACAACGTCATTGATGACGTCGACCCGCACTTTCTTAAGCACTTTAAGGAGTTCATGGGGGCCCAAAGGGACTGGCAATCCAACACAAAATACGGGAAGCCAGTTCAAATTAAAGGCGGGATACCGACAATCTTCCTATGCAATCCTGGTCCCAATAGCAGCTATAAAGAATTCCTCGACGAGAAAGACACAGCACTAAAGAATTGGGCTCTCAAGAATGCGATCTTCGTCACCCTCCAAGGACCACTGTACTCAGGTTCCAATCAAAGTACAGCACAGGGAAGCGAAGAAACGCAACAGGAGGAGGAGAGTCGATCTTGA |
|
Protein Sequence
|
MPQPKKFLINAKNYFLTYPKCSLTKEEALSQFLNLQTPTSIKFIRICRELHENGTPHLHVLIQFEGKFKCQNNRFFDLTSPSRSAHFHPNIQGAKSSSDVKTYIKKDGDILDHGIFQVDGRSARGGCQSANDAYAEAINSGSKAAALNILKEKAPKDFVLQFHNLNSNLDRIFTPPLEEYISPFLSSSFDQVPEELEAWACENVVDAAARPLRPQSIVIEGDSRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHFLKHFKEFMGAQRDWQSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLDEKDTALKNWALKNAIFVTLQGPLYSGSNQSTAQGSEETQQEEESRS |
|
NCBI Accession
|
NP_808735.1
|
|
Location
|
2132-2431 |
|
Gene Name
|
AC4 |
|
Protein Name
|
transcriptional regulator protein |
|
Coding Region
|
ATGAAAATGGGACTCCTCACTTGCATGTTCTCATCCAGTTCGAAGGAAAATTCAAATGCCAAAACAACAGATTCTTTGACCTCACATCCCCAAGCAGGTCAGCACATTTCCATCCAAACATTCAGGGAGCTAAAAGCTCAAGCGATGTCAAAACCTACATTAAGAAAGACGGAGACATCCTTGATCATGGAATTTTCCAAGTCGATGGACGATCAGCTAGAGGAGGTTGCCAATCTGCCAACGACGCATATGCCGAGGCAATCAATTCAGGGTCCAAAGCAGCGGCCCTCAATATATTAA |
|
Protein Sequence
|
MKMGLLTCMFSSSSKENSNAKTTDSLTSHPQAGQHISIQTFRELKAQAMSKPTLRKTETSLIMEFSKSMDDQLEEVANLPTTHMPRQSIQGPKQRPSIY |