Malvastrum yellow vein virus

Basic Information

Genus Begomovirus
NCBI Assembly GCF_000842105.1
Isolate China:Yunnan
Release date 2015/2/12
Submitter Zhou,X., Xie,Y., Peng,Y., Zhang,Z.
Host
Vector
Download Genome |GFF3 |PEP |CDS

Genomic Organization

JBrowse

Genome

NC_004634
ACCGGATGGCCGCGCGATTTTTTGGTGGGCCCTAAACCAATGGTATGACGCGCTGAAAGCTTAAATAACTCTCCCCCCTTATAAATACTTCGGGCCTAAGTATCCGATTTGAAAATGTGGGATCCACTTGTAAACGAGTTCCCCGAGACGGTTCACGGGTTTCGGTGCATGATTTCTATCAAATATCTGCAGTTACTCTCTGAAGGATACTCCCCAGATACTGTTGGTTACGATCTAATACGTGAATTAATTTCTATTTTGCGTTCCAGGAATTATGTCGAAGCGTCCTGCAGATATCGTCATTTCTACCCCCGCGTCGAAGGTGCGTCGTCGTCTGAACTTCGACAGCCCTTACTCAACCCGTGTAACTGTCCCCACTGTCCGCGCCACAAAATCTCGAATGTGGGCGAACAGGCCCATGAACCGCAAACCCAGAATGTACAGGATGTACAGAAGTCCTGATGTTCCACGAGGCTGTGAAGGTCCATGTAAGGTCCAGTCCTTTGAGTCTAGACACGATGTAGTCCATATAGGGAAGGTTATGTGTATTAGTGATGTTACTCGCGGTACTGGGTTGACCCATAGAGTTGGTAAGCGTTTCTGTGTAAAGTCAGTTTATGTGTTGGGTAAGATTTGGATGGATGAAAATATCAAGAGCAAGAATCACACGAACAATGTGATGTTCTTTCTTGTCCGAGATCGACGTCCTACCGGCACGCCTCAGGATTTTGGAGATGTCTTTAACATGTTTGATAACGAGCCTAGCACCGCTACTGTGAAGAATATGCATCGAGATCGTTACCAGGTCGTAAGGAAGTGGTATGCAACTGTTACTGGTGGACAGTATGGAGCAAAGGAACAGGCTTTGGTTAAGAAGTTTGTTAGGGTTAATAATTATGTTGTTTACAACCAGCAAGAGGCTGGGAAGTACGAGAATCATTCCGAGAATGCCTTGATGTTGTATATGGCATGTACCCATGCCTCTAATCCTGTGTACGCTACCCTTAAGATTAGGATTTACTTCTACGATTCTGTAACCAACTGATATTAATAAAGATTGAATTTTATTTCTGAAGTCATGTCTACATACATAGTTTGCTCTATCCTTTTCCATAACACATGATTTATAGCTCTAATAATTGCGTTAATCGAGATTACACCGAGATTTGTGAGATACTTGAGGACTTGGGTTTTGAATACCCTTAAGAAAAGACCAGTCCGAGGGTGTAAGATCGTCCAGATTCGGTAGGTCAGAAAACACTTGTGCACTCCCAGAGCTCTCCGAAGGTTGTAGTTGAATTGGATCCTGATTGTTATGATGTCCATGTTCATCGTGAATGGCCGGTTGTCGTGGCTGAGGATCTTGAAATAGAGGGGATTTGGAAGCTCCCAGATATAGGCGCCACTCCATGCTTGAGCTGCAGTGATGGGTTCCCCTGTGCGTAAATCCATGGTTGCAGCAGTTTATTGATAGAAAATAAGAACACCCGCATTCAAGATCGACTCTCCTCCTCCTGTTGCGTTTCTTCGCTTCCCTGTGCTGTACTTTGATTGGAACCTGAGTACAGTGGTCCTTGGAGGGTGACGAAGATCGCATTCTTGAGAGCCCAATTCTTTAGTGCTGTGTCTTTCTCGTCGAGGAATTCTTTATAGCTGCTATTGGGACCAGGATTGCATAGGAAGATTGTCGGTATCCCGCCTTTAATTTGAACTGGCTTCCCGTATTTTGTGTTGGATTGCCAGTCCCTTTGGGCCCCCATGAACTCCTTAAAGTGCTTAAGAAAGTGCGGGTCGACGTCATCAATGACGTTGTACCATGCGTCGTTGCTGTAGACCTTTGGACTCAGATCTAGATGCCCACACAGATAGTTATGTGGGCCTAGTGACCTGGCCCACATTGTCTTCCCGGTTCGACTATCTCCCTCGATGACTATACTTTGAGGTCTAAGGGGCCGCGCAGCGGCATCGACGACATTCTCGCACGCCCACGCTTCAAGTTCTTCTGGAACTTGATCGAAAGAAGAAGATAAAAAAGGAGAAATATATTCCTCTAGTGGAGGAGTAAAAATCCTATCTAAATTACTATTTAAATTATGAAACTGTAAAACAAAATCTTTAGGAGCCTTCTCCTTTAATATATTGAGGGCCGCTGCTTTGGACCCTGAATTGATTGCCTCGGCATATGCGTCGTTGGCAGATTGGCAACCTCCTCTAGCTGATCGTCCATCGACTTGGAAAATTCCATGATCAAGGATGTCTCCGTCTTTCTTAATGTAGGTTTTGACATCGCTTGAGCTTTTAGCTCCCTGAATGTTTGGATGGAAATGTGCTGACCTGCTTGGGGATGTGAGGTCAAAGAATCTGTTGTTTTGGCATTTGAATTTTCCTTCGAACTGGATGAGAACATGCAAGTGAGGAGTCCCATTTTCATGAAGCTCTCTGCAGATTCTAATGAATTTTATGGAAGTGGGGGTTTGGAGATTTAAGAATTGGGAAAGTGCCTCTTCTTTAGTAAGGGAGCATTTGGGATAAGTGAGGAAATAATTTTTGGCATTTATAAGAAATTTCTTTGGTTGAGGCATGTTGACTTGGTCAATCGGGTCCTCTCAAACTTGGCTATGCAATCGGGGAATGGGTCCTTATTTATAGTTCAGGACCTAAATGGCATAATTGTAAATATGTGTTAGATGATCAAATTTCAAAATCCAAAAGCGGCCATCCGTATAATATT

Gene Information

NCBI Accession NP_808730.1
Location 115-462
Gene Name AV2
Protein Name precoat protein
Coding Region ATGTGGGATCCACTTGTAAACGAGTTCCCCGAGACGGTTCACGGGTTTCGGTGCATGATTTCTATCAAATATCTGCAGTTACTCTCTGAAGGATACTCCCCAGATACTGTTGGTTACGATCTAATACGTGAATTAATTTCTATTTTGCGTTCCAGGAATTATGTCGAAGCGTCCTGCAGATATCGTCATTTCTACCCCCGCGTCGAAGGTGCGTCGTCGTCTGAACTTCGACAGCCCTTACTCAACCCGTGTAACTGTCCCCACTGTCCGCGCCACAAAATCTCGAATGTGGGCGAACAGGCCCATGAACCGCAAACCCAGAATGTACAGGATGTACAGAAGTCCTGA
Protein Sequence MWDPLVNEFPETVHGFRCMISIKYLQLLSEGYSPDTVGYDLIRELISILRSRNYVEASCRYRHFYPRVEGASSSELRQPLLNPCNCPHCPRHKISNVGEQAHEPQTQNVQDVQKS

NCBI Accession NP_808731.1
Location 275-1045
Gene Name AV1
Protein Name coat protein
Coding Region ATGTCGAAGCGTCCTGCAGATATCGTCATTTCTACCCCCGCGTCGAAGGTGCGTCGTCGTCTGAACTTCGACAGCCCTTACTCAACCCGTGTAACTGTCCCCACTGTCCGCGCCACAAAATCTCGAATGTGGGCGAACAGGCCCATGAACCGCAAACCCAGAATGTACAGGATGTACAGAAGTCCTGATGTTCCACGAGGCTGTGAAGGTCCATGTAAGGTCCAGTCCTTTGAGTCTAGACACGATGTAGTCCATATAGGGAAGGTTATGTGTATTAGTGATGTTACTCGCGGTACTGGGTTGACCCATAGAGTTGGTAAGCGTTTCTGTGTAAAGTCAGTTTATGTGTTGGGTAAGATTTGGATGGATGAAAATATCAAGAGCAAGAATCACACGAACAATGTGATGTTCTTTCTTGTCCGAGATCGACGTCCTACCGGCACGCCTCAGGATTTTGGAGATGTCTTTAACATGTTTGATAACGAGCCTAGCACCGCTACTGTGAAGAATATGCATCGAGATCGTTACCAGGTCGTAAGGAAGTGGTATGCAACTGTTACTGGTGGACAGTATGGAGCAAAGGAACAGGCTTTGGTTAAGAAGTTTGTTAGGGTTAATAATTATGTTGTTTACAACCAGCAAGAGGCTGGGAAGTACGAGAATCATTCCGAGAATGCCTTGATGTTGTATATGGCATGTACCCATGCCTCTAATCCTGTGTACGCTACCCTTAAGATTAGGATTTACTTCTACGATTCTGTAACCAACTGA
Protein Sequence MSKRPADIVISTPASKVRRRLNFDSPYSTRVTVPTVRATKSRMWANRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDVVHIGKVMCISDVTRGTGLTHRVGKRFCVKSVYVLGKIWMDENIKSKNHTNNVMFFLVRDRRPTGTPQDFGDVFNMFDNEPSTATVKNMHRDRYQVVRKWYATVTGGQYGAKEQALVKKFVRVNNYVVYNQQEAGKYENHSENALMLYMACTHASNPVYATLKIRIYFYDSVTN

NCBI Accession NP_808732.1
Location 1048-1452
Gene Name AC3
Protein Name replication enhancer protein
Coding Region ATGGATTTACGCACAGGGGAACCCATCACTGCAGCTCAAGCATGGAGTGGCGCCTATATCTGGGAGCTTCCAAATCCCCTCTATTTCAAGATCCTCAGCCACGACAACCGGCCATTCACGATGAACATGGACATCATAACAATCAGGATCCAATTCAACTACAACCTTCGGAGAGCTCTGGGAGTGCACAAGTGTTTTCTGACCTACCGAATCTGGACGATCTTACACCCTCGGACTGGTCTTTTCTTAAGGGTATTCAAAACCCAAGTCCTCAAGTATCTCACAAATCTCGGTGTAATCTCGATTAACGCAATTATTAGAGCTATAAATCATGTGTTATGGAAAAGGATAGAGCAAACTATGTATGTAGACATGACTTCAGAAATAAAATTCAATCTTTATTAA
Protein Sequence MDLRTGEPITAAQAWSGAYIWELPNPLYFKILSHDNRPFTMNMDIITIRIQFNYNLRRALGVHKCFLTYRIWTILHPRTGLFLRVFKTQVLKYLTNLGVISINAIIRAINHVLWKRIEQTMYVDMTSEIKFNLY

NCBI Accession NP_808733.1
Location 1145-1597
Gene Name AC2
Protein Name transcriptional activator protein
Coding Region ATGCGATCTTCGTCACCCTCCAAGGACCACTGTACTCAGGTTCCAATCAAAGTACAGCACAGGGAAGCGAAGAAACGCAACAGGAGGAGGAGAGTCGATCTTGAATGCGGGTGTTCTTATTTTCTATCAATAAACTGCTGCAACCATGGATTTACGCACAGGGGAACCCATCACTGCAGCTCAAGCATGGAGTGGCGCCTATATCTGGGAGCTTCCAAATCCCCTCTATTTCAAGATCCTCAGCCACGACAACCGGCCATTCACGATGAACATGGACATCATAACAATCAGGATCCAATTCAACTACAACCTTCGGAGAGCTCTGGGAGTGCACAAGTGTTTTCTGACCTACCGAATCTGGACGATCTTACACCCTCGGACTGGTCTTTTCTTAAGGGTATTCAAAACCCAAGTCCTCAAGTATCTCACAAATCTCGGTGTAATCTCGATTAA
Protein Sequence MRSSSPSKDHCTQVPIKVQHREAKKRNRRRRVDLECGCSYFLSINCCNHGFTHRGTHHCSSSMEWRLYLGASKSPLFQDPQPRQPAIHDEHGHHNNQDPIQLQPSESSGSAQVFSDLPNLDDLTPSDWSFLKGIQNPSPQVSHKSRCNLD

NCBI Accession NP_808734.1
Location 1494-2582
Gene Name AC1
Protein Name Rep protein
Coding Region ATGCCTCAACCAAAGAAATTTCTTATAAATGCCAAAAATTATTTCCTCACTTATCCCAAATGCTCCCTTACTAAAGAAGAGGCACTTTCCCAATTCTTAAATCTCCAAACCCCCACTTCCATAAAATTCATTAGAATCTGCAGAGAGCTTCATGAAAATGGGACTCCTCACTTGCATGTTCTCATCCAGTTCGAAGGAAAATTCAAATGCCAAAACAACAGATTCTTTGACCTCACATCCCCAAGCAGGTCAGCACATTTCCATCCAAACATTCAGGGAGCTAAAAGCTCAAGCGATGTCAAAACCTACATTAAGAAAGACGGAGACATCCTTGATCATGGAATTTTCCAAGTCGATGGACGATCAGCTAGAGGAGGTTGCCAATCTGCCAACGACGCATATGCCGAGGCAATCAATTCAGGGTCCAAAGCAGCGGCCCTCAATATATTAAAGGAGAAGGCTCCTAAAGATTTTGTTTTACAGTTTCATAATTTAAATAGTAATTTAGATAGGATTTTTACTCCTCCACTAGAGGAATATATTTCTCCTTTTTTATCTTCTTCTTTCGATCAAGTTCCAGAAGAACTTGAAGCGTGGGCGTGCGAGAATGTCGTCGATGCCGCTGCGCGGCCCCTTAGACCTCAAAGTATAGTCATCGAGGGAGATAGTCGAACCGGGAAGACAATGTGGGCCAGGTCACTAGGCCCACATAACTATCTGTGTGGGCATCTAGATCTGAGTCCAAAGGTCTACAGCAACGACGCATGGTACAACGTCATTGATGACGTCGACCCGCACTTTCTTAAGCACTTTAAGGAGTTCATGGGGGCCCAAAGGGACTGGCAATCCAACACAAAATACGGGAAGCCAGTTCAAATTAAAGGCGGGATACCGACAATCTTCCTATGCAATCCTGGTCCCAATAGCAGCTATAAAGAATTCCTCGACGAGAAAGACACAGCACTAAAGAATTGGGCTCTCAAGAATGCGATCTTCGTCACCCTCCAAGGACCACTGTACTCAGGTTCCAATCAAAGTACAGCACAGGGAAGCGAAGAAACGCAACAGGAGGAGGAGAGTCGATCTTGA
Protein Sequence MPQPKKFLINAKNYFLTYPKCSLTKEEALSQFLNLQTPTSIKFIRICRELHENGTPHLHVLIQFEGKFKCQNNRFFDLTSPSRSAHFHPNIQGAKSSSDVKTYIKKDGDILDHGIFQVDGRSARGGCQSANDAYAEAINSGSKAAALNILKEKAPKDFVLQFHNLNSNLDRIFTPPLEEYISPFLSSSFDQVPEELEAWACENVVDAAARPLRPQSIVIEGDSRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHFLKHFKEFMGAQRDWQSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLDEKDTALKNWALKNAIFVTLQGPLYSGSNQSTAQGSEETQQEEESRS

NCBI Accession NP_808735.1
Location 2132-2431
Gene Name AC4
Protein Name transcriptional regulator protein
Coding Region ATGAAAATGGGACTCCTCACTTGCATGTTCTCATCCAGTTCGAAGGAAAATTCAAATGCCAAAACAACAGATTCTTTGACCTCACATCCCCAAGCAGGTCAGCACATTTCCATCCAAACATTCAGGGAGCTAAAAGCTCAAGCGATGTCAAAACCTACATTAAGAAAGACGGAGACATCCTTGATCATGGAATTTTCCAAGTCGATGGACGATCAGCTAGAGGAGGTTGCCAATCTGCCAACGACGCATATGCCGAGGCAATCAATTCAGGGTCCAAAGCAGCGGCCCTCAATATATTAA
Protein Sequence MKMGLLTCMFSSSSKENSNAKTTDSLTSHPQAGQHISIQTFRELKAQAMSKPTLRKTETSLIMEFSKSMDDQLEEVANLPTTHMPRQSIQGPKQRPSIY

References More References in PubMed

1

The Malvastrum Yellow Vein Virus C4 Protein Promotes Disease Symptom Development and Enhances Virus Accumulation in Plants.

Jing C, et al.  Front Microbiol. 2019 Oct 25;10:2425. doi: 10.3389/fmicb.2019.02425. eCollection 2019.

PMID: 31708897
2

Malvastrum yellow vein Yunnan virus is amonopartite begomovirus.

Jiang T, et al.  Acta Virol. 2010;54(1):21-6. doi: 10.4149/av_2010_01_21.

PMID: 20201610
3

Molecular variation of satellite DNA beta molecules associated with Malvastrum yellow vein virus and their role in pathogenicity.

Guo W, et al.  Appl Environ Microbiol. 2008 Mar;74(6):1909-13. doi: 10.1128/AEM.02461-07. Epub 2008 Feb 1.

PMID: 18245261
4

Identification of a novel pepper-infecting monopartite begomovirus in China.

Li P, et al.  Arch Virol. 2021 Jun;166(6):1751-1754. doi: 10.1007/s00705-021-04989-0. Epub 2021 Mar 20.

PMID: 33743050
5

Characterization of sequence elements from Malvastrum yellow vein betasatellite regulating promoter activity and DNA replication.

Zhang J, et al.  Virol J. 2012 Oct 11;9:234. doi: 10.1186/1743-422X-9-234.

PMID: 23057573
6

Characterization of a New Monopartite Begomovirus with a Betasatellite Associated with Leaf Curl, Yellow Vein, and Vein Enation in Hibiscus rosa-sinensis.

Huang CH, et al.  Plant Dis. 2020 May;104(5):1318-1327. doi: 10.1094/PDIS-06-19-1223-RE. Epub 2020 Mar 16.

PMID: 32181724
7

Complete genome sequence of a previously undescribed monopartite begomovirus and betasatellite infecting Malvastrum coromandelianum in Cambodia.

Tang Y, et al.  Arch Virol. 2021 Jun;166(6):1789-1793. doi: 10.1007/s00705-021-05016-y. Epub 2021 Apr 3.

PMID: 33811530
8

Molecular characterization of a distinct begomovirus species and its associated satellite DNA isolated from Malvastrum coromandelianum in China.

Jiang T, et al.  Virus Genes. 2005 Aug;31(1):43-8. doi: 10.1007/s11262-004-2198-z.

PMID: 15965607
9

First report of the complete sequence of Sida golden yellow vein virus from Jamaica.

Stewart CS, et al.  Arch Virol. 2011 Aug;156(8):1481-4. doi: 10.1007/s00705-011-1030-z. Epub 2011 May 29.

PMID: 21625977
10

Molecular characterization of two previously undescribed begomovirus-associated alphasatellite molecules infecting malvaceous species in Cameroon.

Leke WN, et al.  Arch Virol. 2020 Mar;165(3):775-779. doi: 10.1007/s00705-020-04523-8. Epub 2020 Jan 9.

PMID: 31919592