Malvastrum yellow mosaic virus
Basic Information
Genomic Organization
JBrowse
Genome
ACCGGATGGCCGCGCGATTTTTTTTGGTGGGCCCGCAACCAATCAGATGACGCGCTGAAAGCTTAAATAAATTTCCCGCTGTTATAAATACTTAGTGCCTAAGTATCCGCTTTGAAAATGTGGGATCCACTTGTAAACGAGTTTCCCGAAACGGTTCACGGGTTTCGGTGCATGCTTTCTATCAAATATCTTCAGTTACTCTCTGAAGGTTATTCTCCTGATACGGTTGGTTATGATCTAATACGTGAATTAATTTCAATTGTGCGTTCCAGGAATTATGTCGAAGCGTCCTGCAGATATCGTAATTTCTACCCCCGCGTCGAAGGTGCGTCGTCGTCTGAACTTCGACAGCCCTTACTCAACCCGTGTAGCTGTCCCCACTGTCCGCGTCACAAAATCTCGCATGTGGGCGAACAGGCCCATGAATCGCAAGCCCAGAATGTACAGGATGTACAAAAGCCCTGATGTTCCTCGTGGATGTGAAGGCCCGTGTAAAGTCCAGTCGTATGAAGCCCGTCATGATGTAGCCCATGTAGGTAAGGTACTGTGTGTGTCTGACGTTACCCGTGGTAATGGGCTGACCCATCGTGTTGGTAAGAGGTTTTGTATCAAGTCGATTTACGTTCTGGGCAAGGTCTGGATGGATGAGAACATCAAGAAGAAAAATCACACTAACACTGTTATGTTTTTCTTAGTTCGTGATCGGAGACCGTTTGGGACTCCCCAAGATTTCGGTCAGGTGTTTAATATGTATGATAATGAGCCTAGTACTGCCACTGTGAAGAACGATAATAGAGATCGTTTCCAGGTTTTGCGTCGATTTCAGGCAACGGTTACTGGTGGAGACTATGCGTGTAAAGAGCAAGCTTTAGTTAGGAAGTTTATGAAAGTTAACAATCATGTCACTTATAATCATCAGGAGGCAGCGAAGTATGATAACCATACTGAGAATGCGTTGTTGTTGTATATGGCATGTACTCATGCCAGTAACCCTGTGTATGCTACTTTGAAAATCAGGATCTACTTCTATGATTCTCTTCAAAATTAATAAAGATCGAATTTTATTTCTGAATTCATGTCTACATACATTGTTTGTTCTATTTTGTTCCATAATACATGATTGACAGCTCTAATAATTGAATTAATTGAGATTACACCGAGATTGTTGAGATATTTGAGGACTTGGGTTTTGAATACCCTTAAGAAAAGACCAATCGGAGGGTGTAAGGTCGTCCAGATTCGGTAGGTCAGAAAACACTTGTGCACTCCCAGAGCTCTCCGAAGGTTGTAGTTGAATTGGATTCTGATTGTTATGATGTCCATGTTCATCGTGAATGGACGGTTGTCGTGGCTTAGGATCTTGAAATAGAGGGGATTTTGAACCTCCCAGATATAGGCGCCACTCCATGCTTGAGCTGCAGTGATGGGTTCCCCTGTGCGTAAATCCATGGTTGAAACAGTTGATTGATAGGTAATAAGAACACCCGCATTCAAGATCTACTCTCCTCCTCCTGTTGCGTATCTTCGCTTCCCTGTGCTGTACTTTGATTGGAACCGGAGTACAGTGGTCCTTCGAGGGTGACGAAGATCGCATTCTTGAGAGTCCAGTTCTTTAATGCTGTGTTTTTTTCCTCGTTGAGGAATTCTTTATAACTGCTGTTTGGACCAGGATTGCACAGGAAGATTGTCGGTATCCCGCCTTTAATTTGAACTGGCTTTCCGTACTTTGTGTTGCTTTGCCAGTCCCTTTGGGCCCCCATGAATTCCTTGAAGTGCTTGAGGAAGTGCGGATCTACGTCATCAATGACGTTGTACCAGGCTTCATTGCTGTAGACCTTTGGGCTTAGATCCAGATGTCCACACAGATAATTGTGTGGGCCTAGTGACCTAGCCCACATCGTCTTCCCGGTACGACTGTCTCCCTCAATCACTATACTCATTGGTCTTAGGGGCCGCGCAGCGGCGTCGACGACGTTCTCCGACACCCACTCTTCAAGTTCTTCTGGAACTTGATCGAAAGAAGAAGAAAGAAAAGGAGAAACATAAACCTCCAACGGAGGTGTGAAGATCCTTTCTAAATTAGCATTTAGATTATGAAATTGTAAAACATAATCTTTGGGTGCTAACTCTTTAATCACATTAAGAGCCTCTGACTTACTGCCTGTGTTAAGTGCTGCGGCGTAAGCATCATTGGCTGATTGTTGTCCCCCTCTTGCAGATCGTCCGTCGATCTGAAACTCTCCCCATTCGAGGGTGTCTCCGTCCTTGTGGATGTAGGACTTGACGTCGGAGCTGGATTTAACTCCCTGGATGTTTGGATGGAAAAGTGCTGACCTGGTTGGGGATACCAGGTCGAAGAATCTGTTATTCTTGCACTGGTATTTCCCCTCGAACTGAATAAGCACGTGGAGATGAGGGTTCCCATTTTGGTGGAGCTCTCTGCAGATTTTGATGTATTTTTTATTTGTTGGGGTTTCTAGGTTTTGAAGTTGTGAAAGTGCTTCTTCTTTAGTTAAAGAGCACTCAGGATATGTAAGAAAATAATTTTTGGCATTTATTTTGAATTTATTTGGGGGAGCCATTGACTAGTCAATTGGTGTCTCACAAACTTAGCTATGCAATCGGTGTCTGGGGTCTTATTTATAGGTAGACACCAAATGGCATTTTCGTAAATCCTCAAAGAATTTCAAAATCTTACGCTCCAAAAAGCGGCCATCCGTCTAATATT
Gene Information
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NCBI Accession
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YP_851007.1
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Location
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118-465 |
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Gene Name
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AV2 |
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Protein Name
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AV2 protein |
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Coding Region
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ATGTGGGATCCACTTGTAAACGAGTTTCCCGAAACGGTTCACGGGTTTCGGTGCATGCTTTCTATCAAATATCTTCAGTTACTCTCTGAAGGTTATTCTCCTGATACGGTTGGTTATGATCTAATACGTGAATTAATTTCAATTGTGCGTTCCAGGAATTATGTCGAAGCGTCCTGCAGATATCGTAATTTCTACCCCCGCGTCGAAGGTGCGTCGTCGTCTGAACTTCGACAGCCCTTACTCAACCCGTGTAGCTGTCCCCACTGTCCGCGTCACAAAATCTCGCATGTGGGCGAACAGGCCCATGAATCGCAAGCCCAGAATGTACAGGATGTACAAAAGCCCTGA |
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Protein Sequence
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MWDPLVNEFPETVHGFRCMLSIKYLQLLSEGYSPDTVGYDLIRELISIVRSRNYVEASCRYRNFYPRVEGASSSELRQPLLNPCSCPHCPRHKISHVGEQAHESQAQNVQDVQKP |
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NCBI Accession
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YP_851008.1
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Location
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278-1048 |
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Gene Name
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AV1 |
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Protein Name
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coat protein |
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Coding Region
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ATGTCGAAGCGTCCTGCAGATATCGTAATTTCTACCCCCGCGTCGAAGGTGCGTCGTCGTCTGAACTTCGACAGCCCTTACTCAACCCGTGTAGCTGTCCCCACTGTCCGCGTCACAAAATCTCGCATGTGGGCGAACAGGCCCATGAATCGCAAGCCCAGAATGTACAGGATGTACAAAAGCCCTGATGTTCCTCGTGGATGTGAAGGCCCGTGTAAAGTCCAGTCGTATGAAGCCCGTCATGATGTAGCCCATGTAGGTAAGGTACTGTGTGTGTCTGACGTTACCCGTGGTAATGGGCTGACCCATCGTGTTGGTAAGAGGTTTTGTATCAAGTCGATTTACGTTCTGGGCAAGGTCTGGATGGATGAGAACATCAAGAAGAAAAATCACACTAACACTGTTATGTTTTTCTTAGTTCGTGATCGGAGACCGTTTGGGACTCCCCAAGATTTCGGTCAGGTGTTTAATATGTATGATAATGAGCCTAGTACTGCCACTGTGAAGAACGATAATAGAGATCGTTTCCAGGTTTTGCGTCGATTTCAGGCAACGGTTACTGGTGGAGACTATGCGTGTAAAGAGCAAGCTTTAGTTAGGAAGTTTATGAAAGTTAACAATCATGTCACTTATAATCATCAGGAGGCAGCGAAGTATGATAACCATACTGAGAATGCGTTGTTGTTGTATATGGCATGTACTCATGCCAGTAACCCTGTGTATGCTACTTTGAAAATCAGGATCTACTTCTATGATTCTCTTCAAAATTAA |
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Protein Sequence
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MSKRPADIVISTPASKVRRRLNFDSPYSTRVAVPTVRVTKSRMWANRPMNRKPRMYRMYKSPDVPRGCEGPCKVQSYEARHDVAHVGKVLCVSDVTRGNGLTHRVGKRFCIKSIYVLGKVWMDENIKKKNHTNTVMFFLVRDRRPFGTPQDFGQVFNMYDNEPSTATVKNDNRDRFQVLRRFQATVTGGDYACKEQALVRKFMKVNNHVTYNHQEAAKYDNHTENALLLYMACTHASNPVYATLKIRIYFYDSLQN |
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NCBI Accession
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YP_851009.1
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Location
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1045-1449 |
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Gene Name
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AC3 |
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Protein Name
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AC3 protein |
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Coding Region
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ATGGATTTACGCACAGGGGAACCCATCACTGCAGCTCAAGCATGGAGTGGCGCCTATATCTGGGAGGTTCAAAATCCCCTCTATTTCAAGATCCTAAGCCACGACAACCGTCCATTCACGATGAACATGGACATCATAACAATCAGAATCCAATTCAACTACAACCTTCGGAGAGCTCTGGGAGTGCACAAGTGTTTTCTGACCTACCGAATCTGGACGACCTTACACCCTCCGATTGGTCTTTTCTTAAGGGTATTCAAAACCCAAGTCCTCAAATATCTCAACAATCTCGGTGTAATCTCAATTAATTCAATTATTAGAGCTGTCAATCATGTATTATGGAACAAAATAGAACAAACAATGTATGTAGACATGAATTCAGAAATAAAATTCGATCTTTATTAA |
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Protein Sequence
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MDLRTGEPITAAQAWSGAYIWEVQNPLYFKILSHDNRPFTMNMDIITIRIQFNYNLRRALGVHKCFLTYRIWTTLHPPIGLFLRVFKTQVLKYLNNLGVISINSIIRAVNHVLWNKIEQTMYVDMNSEIKFDLY |
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NCBI Accession
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YP_851010.1
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Location
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1142-1594 |
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Gene Name
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AC2 |
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Protein Name
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AC2 protein |
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Coding Region
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ATGCGATCTTCGTCACCCTCGAAGGACCACTGTACTCCGGTTCCAATCAAAGTACAGCACAGGGAAGCGAAGATACGCAACAGGAGGAGGAGAGTAGATCTTGAATGCGGGTGTTCTTATTACCTATCAATCAACTGTTTCAACCATGGATTTACGCACAGGGGAACCCATCACTGCAGCTCAAGCATGGAGTGGCGCCTATATCTGGGAGGTTCAAAATCCCCTCTATTTCAAGATCCTAAGCCACGACAACCGTCCATTCACGATGAACATGGACATCATAACAATCAGAATCCAATTCAACTACAACCTTCGGAGAGCTCTGGGAGTGCACAAGTGTTTTCTGACCTACCGAATCTGGACGACCTTACACCCTCCGATTGGTCTTTTCTTAAGGGTATTCAAAACCCAAGTCCTCAAATATCTCAACAATCTCGGTGTAATCTCAATTAA |
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Protein Sequence
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MRSSSPSKDHCTPVPIKVQHREAKIRNRRRRVDLECGCSYYLSINCFNHGFTHRGTHHCSSSMEWRLYLGGSKSPLFQDPKPRQPSIHDEHGHHNNQNPIQLQPSESSGSAQVFSDLPNLDDLTPSDWSFLKGIQNPSPQISQQSRCNLN |
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NCBI Accession
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YP_851011.1
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Location
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1491-2582 |
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Gene Name
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AC1 |
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Protein Name
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replication protein |
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Coding Region
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ATGGCTCCCCCAAATAAATTCAAAATAAATGCCAAAAATTATTTTCTTACATATCCTGAGTGCTCTTTAACTAAAGAAGAAGCACTTTCACAACTTCAAAACCTAGAAACCCCAACAAATAAAAAATACATCAAAATCTGCAGAGAGCTCCACCAAAATGGGAACCCTCATCTCCACGTGCTTATTCAGTTCGAGGGGAAATACCAGTGCAAGAATAACAGATTCTTCGACCTGGTATCCCCAACCAGGTCAGCACTTTTCCATCCAAACATCCAGGGAGTTAAATCCAGCTCCGACGTCAAGTCCTACATCCACAAGGACGGAGACACCCTCGAATGGGGAGAGTTTCAGATCGACGGACGATCTGCAAGAGGGGGACAACAATCAGCCAATGATGCTTACGCCGCAGCACTTAACACAGGCAGTAAGTCAGAGGCTCTTAATGTGATTAAAGAGTTAGCACCCAAAGATTATGTTTTACAATTTCATAATCTAAATGCTAATTTAGAAAGGATCTTCACACCTCCGTTGGAGGTTTATGTTTCTCCTTTTCTTTCTTCTTCTTTCGATCAAGTTCCAGAAGAACTTGAAGAGTGGGTGTCGGAGAACGTCGTCGACGCCGCTGCGCGGCCCCTAAGACCAATGAGTATAGTGATTGAGGGAGACAGTCGTACCGGGAAGACGATGTGGGCTAGGTCACTAGGCCCACACAATTATCTGTGTGGACATCTGGATCTAAGCCCAAAGGTCTACAGCAATGAAGCCTGGTACAACGTCATTGATGACGTAGATCCGCACTTCCTCAAGCACTTCAAGGAATTCATGGGGGCCCAAAGGGACTGGCAAAGCAACACAAAGTACGGAAAGCCAGTTCAAATTAAAGGCGGGATACCGACAATCTTCCTGTGCAATCCTGGTCCAAACAGCAGTTATAAAGAATTCCTCAACGAGGAAAAAAACACAGCATTAAAGAACTGGACTCTCAAGAATGCGATCTTCGTCACCCTCGAAGGACCACTGTACTCCGGTTCCAATCAAAGTACAGCACAGGGAAGCGAAGATACGCAACAGGAGGAGGAGAGTAGATCTTGA |
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Protein Sequence
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MAPPNKFKINAKNYFLTYPECSLTKEEALSQLQNLETPTNKKYIKICRELHQNGNPHLHVLIQFEGKYQCKNNRFFDLVSPTRSALFHPNIQGVKSSSDVKSYIHKDGDTLEWGEFQIDGRSARGGQQSANDAYAAALNTGSKSEALNVIKELAPKDYVLQFHNLNANLERIFTPPLEVYVSPFLSSSFDQVPEELEEWVSENVVDAAARPLRPMSIVIEGDSRTGKTMWARSLGPHNYLCGHLDLSPKVYSNEAWYNVIDDVDPHFLKHFKEFMGAQRDWQSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLNEEKNTALKNWTLKNAIFVTLEGPLYSGSNQSTAQGSEDTQQEEESRS |
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NCBI Accession
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YP_851012.1
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Location
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2135-2425 |
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Gene Name
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AC4 |
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Protein Name
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AC4 protein |
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Coding Region
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ATGGGAACCCTCATCTCCACGTGCTTATTCAGTTCGAGGGGAAATACCAGTGCAAGAATAACAGATTCTTCGACCTGGTATCCCCAACCAGGTCAGCACTTTTCCATCCAAACATCCAGGGAGTTAAATCCAGCTCCGACGTCAAGTCCTACATCCACAAGGACGGAGACACCCTCGAATGGGGAGAGTTTCAGATCGACGGACGATCTGCAAGAGGGGGACAACAATCAGCCAATGATGCTTACGCCGCAGCACTTAACACAGGCAGTAAGTCAGAGGCTCTTAATGTGA |
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Protein Sequence
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MGTLISTCLFSSRGNTSARITDSSTWYPQPGQHFSIQTSRELNPAPTSSPTSTRTETPSNGESFRSTDDLQEGDNNQPMMLTPQHLTQAVSQRLLM |