Malvastrum yellow mosaic virus

Basic Information

Genus Begomovirus
NCBI Assembly GCF_000867765.1
Release date 2015/2/13
Submitter Guo,X., Shi,M., Zhou,X.
Host
Vector
Download Genome |GFF3 |PEP |CDS

Genomic Organization

JBrowse

Genome

NC_008559
ACCGGATGGCCGCGCGATTTTTTTTGGTGGGCCCGCAACCAATCAGATGACGCGCTGAAAGCTTAAATAAATTTCCCGCTGTTATAAATACTTAGTGCCTAAGTATCCGCTTTGAAAATGTGGGATCCACTTGTAAACGAGTTTCCCGAAACGGTTCACGGGTTTCGGTGCATGCTTTCTATCAAATATCTTCAGTTACTCTCTGAAGGTTATTCTCCTGATACGGTTGGTTATGATCTAATACGTGAATTAATTTCAATTGTGCGTTCCAGGAATTATGTCGAAGCGTCCTGCAGATATCGTAATTTCTACCCCCGCGTCGAAGGTGCGTCGTCGTCTGAACTTCGACAGCCCTTACTCAACCCGTGTAGCTGTCCCCACTGTCCGCGTCACAAAATCTCGCATGTGGGCGAACAGGCCCATGAATCGCAAGCCCAGAATGTACAGGATGTACAAAAGCCCTGATGTTCCTCGTGGATGTGAAGGCCCGTGTAAAGTCCAGTCGTATGAAGCCCGTCATGATGTAGCCCATGTAGGTAAGGTACTGTGTGTGTCTGACGTTACCCGTGGTAATGGGCTGACCCATCGTGTTGGTAAGAGGTTTTGTATCAAGTCGATTTACGTTCTGGGCAAGGTCTGGATGGATGAGAACATCAAGAAGAAAAATCACACTAACACTGTTATGTTTTTCTTAGTTCGTGATCGGAGACCGTTTGGGACTCCCCAAGATTTCGGTCAGGTGTTTAATATGTATGATAATGAGCCTAGTACTGCCACTGTGAAGAACGATAATAGAGATCGTTTCCAGGTTTTGCGTCGATTTCAGGCAACGGTTACTGGTGGAGACTATGCGTGTAAAGAGCAAGCTTTAGTTAGGAAGTTTATGAAAGTTAACAATCATGTCACTTATAATCATCAGGAGGCAGCGAAGTATGATAACCATACTGAGAATGCGTTGTTGTTGTATATGGCATGTACTCATGCCAGTAACCCTGTGTATGCTACTTTGAAAATCAGGATCTACTTCTATGATTCTCTTCAAAATTAATAAAGATCGAATTTTATTTCTGAATTCATGTCTACATACATTGTTTGTTCTATTTTGTTCCATAATACATGATTGACAGCTCTAATAATTGAATTAATTGAGATTACACCGAGATTGTTGAGATATTTGAGGACTTGGGTTTTGAATACCCTTAAGAAAAGACCAATCGGAGGGTGTAAGGTCGTCCAGATTCGGTAGGTCAGAAAACACTTGTGCACTCCCAGAGCTCTCCGAAGGTTGTAGTTGAATTGGATTCTGATTGTTATGATGTCCATGTTCATCGTGAATGGACGGTTGTCGTGGCTTAGGATCTTGAAATAGAGGGGATTTTGAACCTCCCAGATATAGGCGCCACTCCATGCTTGAGCTGCAGTGATGGGTTCCCCTGTGCGTAAATCCATGGTTGAAACAGTTGATTGATAGGTAATAAGAACACCCGCATTCAAGATCTACTCTCCTCCTCCTGTTGCGTATCTTCGCTTCCCTGTGCTGTACTTTGATTGGAACCGGAGTACAGTGGTCCTTCGAGGGTGACGAAGATCGCATTCTTGAGAGTCCAGTTCTTTAATGCTGTGTTTTTTTCCTCGTTGAGGAATTCTTTATAACTGCTGTTTGGACCAGGATTGCACAGGAAGATTGTCGGTATCCCGCCTTTAATTTGAACTGGCTTTCCGTACTTTGTGTTGCTTTGCCAGTCCCTTTGGGCCCCCATGAATTCCTTGAAGTGCTTGAGGAAGTGCGGATCTACGTCATCAATGACGTTGTACCAGGCTTCATTGCTGTAGACCTTTGGGCTTAGATCCAGATGTCCACACAGATAATTGTGTGGGCCTAGTGACCTAGCCCACATCGTCTTCCCGGTACGACTGTCTCCCTCAATCACTATACTCATTGGTCTTAGGGGCCGCGCAGCGGCGTCGACGACGTTCTCCGACACCCACTCTTCAAGTTCTTCTGGAACTTGATCGAAAGAAGAAGAAAGAAAAGGAGAAACATAAACCTCCAACGGAGGTGTGAAGATCCTTTCTAAATTAGCATTTAGATTATGAAATTGTAAAACATAATCTTTGGGTGCTAACTCTTTAATCACATTAAGAGCCTCTGACTTACTGCCTGTGTTAAGTGCTGCGGCGTAAGCATCATTGGCTGATTGTTGTCCCCCTCTTGCAGATCGTCCGTCGATCTGAAACTCTCCCCATTCGAGGGTGTCTCCGTCCTTGTGGATGTAGGACTTGACGTCGGAGCTGGATTTAACTCCCTGGATGTTTGGATGGAAAAGTGCTGACCTGGTTGGGGATACCAGGTCGAAGAATCTGTTATTCTTGCACTGGTATTTCCCCTCGAACTGAATAAGCACGTGGAGATGAGGGTTCCCATTTTGGTGGAGCTCTCTGCAGATTTTGATGTATTTTTTATTTGTTGGGGTTTCTAGGTTTTGAAGTTGTGAAAGTGCTTCTTCTTTAGTTAAAGAGCACTCAGGATATGTAAGAAAATAATTTTTGGCATTTATTTTGAATTTATTTGGGGGAGCCATTGACTAGTCAATTGGTGTCTCACAAACTTAGCTATGCAATCGGTGTCTGGGGTCTTATTTATAGGTAGACACCAAATGGCATTTTCGTAAATCCTCAAAGAATTTCAAAATCTTACGCTCCAAAAAGCGGCCATCCGTCTAATATT

Gene Information

NCBI Accession YP_851007.1
Location 118-465
Gene Name AV2
Protein Name AV2 protein
Coding Region ATGTGGGATCCACTTGTAAACGAGTTTCCCGAAACGGTTCACGGGTTTCGGTGCATGCTTTCTATCAAATATCTTCAGTTACTCTCTGAAGGTTATTCTCCTGATACGGTTGGTTATGATCTAATACGTGAATTAATTTCAATTGTGCGTTCCAGGAATTATGTCGAAGCGTCCTGCAGATATCGTAATTTCTACCCCCGCGTCGAAGGTGCGTCGTCGTCTGAACTTCGACAGCCCTTACTCAACCCGTGTAGCTGTCCCCACTGTCCGCGTCACAAAATCTCGCATGTGGGCGAACAGGCCCATGAATCGCAAGCCCAGAATGTACAGGATGTACAAAAGCCCTGA
Protein Sequence MWDPLVNEFPETVHGFRCMLSIKYLQLLSEGYSPDTVGYDLIRELISIVRSRNYVEASCRYRNFYPRVEGASSSELRQPLLNPCSCPHCPRHKISHVGEQAHESQAQNVQDVQKP

NCBI Accession YP_851008.1
Location 278-1048
Gene Name AV1
Protein Name coat protein
Coding Region ATGTCGAAGCGTCCTGCAGATATCGTAATTTCTACCCCCGCGTCGAAGGTGCGTCGTCGTCTGAACTTCGACAGCCCTTACTCAACCCGTGTAGCTGTCCCCACTGTCCGCGTCACAAAATCTCGCATGTGGGCGAACAGGCCCATGAATCGCAAGCCCAGAATGTACAGGATGTACAAAAGCCCTGATGTTCCTCGTGGATGTGAAGGCCCGTGTAAAGTCCAGTCGTATGAAGCCCGTCATGATGTAGCCCATGTAGGTAAGGTACTGTGTGTGTCTGACGTTACCCGTGGTAATGGGCTGACCCATCGTGTTGGTAAGAGGTTTTGTATCAAGTCGATTTACGTTCTGGGCAAGGTCTGGATGGATGAGAACATCAAGAAGAAAAATCACACTAACACTGTTATGTTTTTCTTAGTTCGTGATCGGAGACCGTTTGGGACTCCCCAAGATTTCGGTCAGGTGTTTAATATGTATGATAATGAGCCTAGTACTGCCACTGTGAAGAACGATAATAGAGATCGTTTCCAGGTTTTGCGTCGATTTCAGGCAACGGTTACTGGTGGAGACTATGCGTGTAAAGAGCAAGCTTTAGTTAGGAAGTTTATGAAAGTTAACAATCATGTCACTTATAATCATCAGGAGGCAGCGAAGTATGATAACCATACTGAGAATGCGTTGTTGTTGTATATGGCATGTACTCATGCCAGTAACCCTGTGTATGCTACTTTGAAAATCAGGATCTACTTCTATGATTCTCTTCAAAATTAA
Protein Sequence MSKRPADIVISTPASKVRRRLNFDSPYSTRVAVPTVRVTKSRMWANRPMNRKPRMYRMYKSPDVPRGCEGPCKVQSYEARHDVAHVGKVLCVSDVTRGNGLTHRVGKRFCIKSIYVLGKVWMDENIKKKNHTNTVMFFLVRDRRPFGTPQDFGQVFNMYDNEPSTATVKNDNRDRFQVLRRFQATVTGGDYACKEQALVRKFMKVNNHVTYNHQEAAKYDNHTENALLLYMACTHASNPVYATLKIRIYFYDSLQN

NCBI Accession YP_851009.1
Location 1045-1449
Gene Name AC3
Protein Name AC3 protein
Coding Region ATGGATTTACGCACAGGGGAACCCATCACTGCAGCTCAAGCATGGAGTGGCGCCTATATCTGGGAGGTTCAAAATCCCCTCTATTTCAAGATCCTAAGCCACGACAACCGTCCATTCACGATGAACATGGACATCATAACAATCAGAATCCAATTCAACTACAACCTTCGGAGAGCTCTGGGAGTGCACAAGTGTTTTCTGACCTACCGAATCTGGACGACCTTACACCCTCCGATTGGTCTTTTCTTAAGGGTATTCAAAACCCAAGTCCTCAAATATCTCAACAATCTCGGTGTAATCTCAATTAATTCAATTATTAGAGCTGTCAATCATGTATTATGGAACAAAATAGAACAAACAATGTATGTAGACATGAATTCAGAAATAAAATTCGATCTTTATTAA
Protein Sequence MDLRTGEPITAAQAWSGAYIWEVQNPLYFKILSHDNRPFTMNMDIITIRIQFNYNLRRALGVHKCFLTYRIWTTLHPPIGLFLRVFKTQVLKYLNNLGVISINSIIRAVNHVLWNKIEQTMYVDMNSEIKFDLY

NCBI Accession YP_851010.1
Location 1142-1594
Gene Name AC2
Protein Name AC2 protein
Coding Region ATGCGATCTTCGTCACCCTCGAAGGACCACTGTACTCCGGTTCCAATCAAAGTACAGCACAGGGAAGCGAAGATACGCAACAGGAGGAGGAGAGTAGATCTTGAATGCGGGTGTTCTTATTACCTATCAATCAACTGTTTCAACCATGGATTTACGCACAGGGGAACCCATCACTGCAGCTCAAGCATGGAGTGGCGCCTATATCTGGGAGGTTCAAAATCCCCTCTATTTCAAGATCCTAAGCCACGACAACCGTCCATTCACGATGAACATGGACATCATAACAATCAGAATCCAATTCAACTACAACCTTCGGAGAGCTCTGGGAGTGCACAAGTGTTTTCTGACCTACCGAATCTGGACGACCTTACACCCTCCGATTGGTCTTTTCTTAAGGGTATTCAAAACCCAAGTCCTCAAATATCTCAACAATCTCGGTGTAATCTCAATTAA
Protein Sequence MRSSSPSKDHCTPVPIKVQHREAKIRNRRRRVDLECGCSYYLSINCFNHGFTHRGTHHCSSSMEWRLYLGGSKSPLFQDPKPRQPSIHDEHGHHNNQNPIQLQPSESSGSAQVFSDLPNLDDLTPSDWSFLKGIQNPSPQISQQSRCNLN

NCBI Accession YP_851011.1
Location 1491-2582
Gene Name AC1
Protein Name replication protein
Coding Region ATGGCTCCCCCAAATAAATTCAAAATAAATGCCAAAAATTATTTTCTTACATATCCTGAGTGCTCTTTAACTAAAGAAGAAGCACTTTCACAACTTCAAAACCTAGAAACCCCAACAAATAAAAAATACATCAAAATCTGCAGAGAGCTCCACCAAAATGGGAACCCTCATCTCCACGTGCTTATTCAGTTCGAGGGGAAATACCAGTGCAAGAATAACAGATTCTTCGACCTGGTATCCCCAACCAGGTCAGCACTTTTCCATCCAAACATCCAGGGAGTTAAATCCAGCTCCGACGTCAAGTCCTACATCCACAAGGACGGAGACACCCTCGAATGGGGAGAGTTTCAGATCGACGGACGATCTGCAAGAGGGGGACAACAATCAGCCAATGATGCTTACGCCGCAGCACTTAACACAGGCAGTAAGTCAGAGGCTCTTAATGTGATTAAAGAGTTAGCACCCAAAGATTATGTTTTACAATTTCATAATCTAAATGCTAATTTAGAAAGGATCTTCACACCTCCGTTGGAGGTTTATGTTTCTCCTTTTCTTTCTTCTTCTTTCGATCAAGTTCCAGAAGAACTTGAAGAGTGGGTGTCGGAGAACGTCGTCGACGCCGCTGCGCGGCCCCTAAGACCAATGAGTATAGTGATTGAGGGAGACAGTCGTACCGGGAAGACGATGTGGGCTAGGTCACTAGGCCCACACAATTATCTGTGTGGACATCTGGATCTAAGCCCAAAGGTCTACAGCAATGAAGCCTGGTACAACGTCATTGATGACGTAGATCCGCACTTCCTCAAGCACTTCAAGGAATTCATGGGGGCCCAAAGGGACTGGCAAAGCAACACAAAGTACGGAAAGCCAGTTCAAATTAAAGGCGGGATACCGACAATCTTCCTGTGCAATCCTGGTCCAAACAGCAGTTATAAAGAATTCCTCAACGAGGAAAAAAACACAGCATTAAAGAACTGGACTCTCAAGAATGCGATCTTCGTCACCCTCGAAGGACCACTGTACTCCGGTTCCAATCAAAGTACAGCACAGGGAAGCGAAGATACGCAACAGGAGGAGGAGAGTAGATCTTGA
Protein Sequence MAPPNKFKINAKNYFLTYPECSLTKEEALSQLQNLETPTNKKYIKICRELHQNGNPHLHVLIQFEGKYQCKNNRFFDLVSPTRSALFHPNIQGVKSSSDVKSYIHKDGDTLEWGEFQIDGRSARGGQQSANDAYAAALNTGSKSEALNVIKELAPKDYVLQFHNLNANLERIFTPPLEVYVSPFLSSSFDQVPEELEEWVSENVVDAAARPLRPMSIVIEGDSRTGKTMWARSLGPHNYLCGHLDLSPKVYSNEAWYNVIDDVDPHFLKHFKEFMGAQRDWQSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLNEEKNTALKNWTLKNAIFVTLEGPLYSGSNQSTAQGSEDTQQEEESRS

NCBI Accession YP_851012.1
Location 2135-2425
Gene Name AC4
Protein Name AC4 protein
Coding Region ATGGGAACCCTCATCTCCACGTGCTTATTCAGTTCGAGGGGAAATACCAGTGCAAGAATAACAGATTCTTCGACCTGGTATCCCCAACCAGGTCAGCACTTTTCCATCCAAACATCCAGGGAGTTAAATCCAGCTCCGACGTCAAGTCCTACATCCACAAGGACGGAGACACCCTCGAATGGGGAGAGTTTCAGATCGACGGACGATCTGCAAGAGGGGGACAACAATCAGCCAATGATGCTTACGCCGCAGCACTTAACACAGGCAGTAAGTCAGAGGCTCTTAATGTGA
Protein Sequence MGTLISTCLFSSRGNTSARITDSSTWYPQPGQHFSIQTSRELNPAPTSSPTSTRTETPSNGESFRSTDDLQEGDNNQPMMLTPQHLTQAVSQRLLM

References More References in PubMed

1

Complete nucleotide sequences of a new bipartite begomovirus from Malvastrum sp. plants with bright yellow mosaic symptoms in South Texas.

Alabi OJ, et al.  Arch Virol. 2016 Jun;161(6):1729-33. doi: 10.1007/s00705-016-2821-z. Epub 2016 Mar 26.

PMID: 27016928
2

Nanovirus-like DNA component associated with the Malvastrum yellow mosaic virus.

Guo XJ, et al.  Acta Virol. 2008;52(1):63-6.

PMID: 18459838
3

Complete nucleotide sequences of Malvastrum yellow mosaic virus and its associated DNA beta molecule.

Guo X, et al.  Arch Virol. 2007;152(3):641-3. doi: 10.1007/s00705-006-0894-9. Epub 2006 Dec 28.

PMID: 17187293
4

Sida chlorotic leaf virus: a new recombinant begomovirus found in non-cultivated plants and Cucumis sativus L.

García-Rodríguez DA, et al.  PeerJ. 2023 Mar 22;11:e15047. doi: 10.7717/peerj.15047. eCollection 2023.

PMID: 36974135
5

Molecular characterization and phylogeny of two begomoviruses infecting Malvastrum americanum in Jamaica: evidence of the contribution of inter-species recombination to the evolution of malvaceous weed-associated begomoviruses from the northern Caribbean.

Graham AP, et al.  Virus Genes. 2010 Apr;40(2):256-66. doi: 10.1007/s11262-009-0430-6. Epub 2009 Dec 19.

PMID: 20024609
6

A novel monopartite begomovirus and satellites associated with yellow mosaic disease of Sida spp. in India.

Chahwala FD, et al.  Arch Virol. 2021 Jan;166(1):299-302. doi: 10.1007/s00705-020-04843-9. Epub 2020 Oct 17.

PMID: 33068191
7

First report of the complete sequence of Sida golden yellow vein virus from Jamaica.

Stewart CS, et al.  Arch Virol. 2011 Aug;156(8):1481-4. doi: 10.1007/s00705-011-1030-z. Epub 2011 May 29.

PMID: 21625977
8

Deciphering the biology of deltasatellites from the New World: maintenance by New World begomoviruses and whitefly transmission.

Fiallo-Olivé E, et al.  New Phytol. 2016 Nov;212(3):680-692. doi: 10.1111/nph.14071. Epub 2016 Jul 11.

PMID: 27400152
9

Mixed infection of Sida jamaicensis in Jamaica reveals the presence of three recombinant begomovirus DNA A components.

Stewart C, et al.  Arch Virol. 2014 Sep;159(9):2509-12. doi: 10.1007/s00705-014-2063-x. Epub 2014 Apr 1.

PMID: 24687859
10

Begomoviruses infecting weeds in Cuba: increased host range and a novel virus infecting Sida rhombifolia.

Fiallo-Olivé E, et al.  Arch Virol. 2012 Jan;157(1):141-6. doi: 10.1007/s00705-011-1123-8. Epub 2011 Oct 1.

PMID: 21964921