Allamanda leaf curl virus

Basic Information

Genus Begomovirus
NCBI Assembly GCF_000874545.1
Isolate China
Release date 2015/2/13
Submitter He,Z.F., Mao,M.J., Yu,H., Li,H.P., Chen,X.
Host
Vector
Download Genome |GFF3 |PEP |CDS

Genomic Organization

JBrowse

Genome

NC_010947
ACCGGAAGGCCCGCCGCCCATTTTAAAGTGGGCCCCCCCACTAAGTTTTGTCGGCCGATGGGAACGCTCCCTCAGAGTCTCTTTAAATGTACGTGTATGTATTTATACTTTTGTCTCTGTACCCTATACGTATTAAAATGTGGGACCCACTGGTCAATGAATTTCCAGAAACTGTACATGGTTTCAGGTCTATGCTTGCAATCAAGTATTTGCAGCTTGTAGAGGCTACGTATTCTCCCGATACGTTGGGGTACGATCTTATACGAGATCTCATACTGGTATTGCGAGCTAGGAGCTATGTCGAAGCGACCCGCCGATATAGTCATTTCCACACCCGCTTCCAAGGTGCGTCGGCGTCTGAACTTCGACAGCCCATACACCAGCCGTGCTGTTGCCCCCACTGTCCTCGTCACAAAGAAAAGGAGATTATGGGCCAATCGGCCCATGTACCGGAAGCCCAGACTGTACAGAATGTACAGAAGCCCTGATGTTCCTAGGGGCTGTGAAGGCCCATGTAAGGTCCAGTCGTTTGAACAGAGGCATGACATAGCCCATACTGGGAAGGTTTTGTGTATTTCTGATGTTACTAGGGGTAATGGTATTACCCATAGGGTAGGAAAGAGGTTTTGTATTAAGTCTGTTTATATTTTAGGCAAAGTGTGGATGGATGAGAATATTAAGACCAAGAACCACACGAATAGTGTTATGTTTTTTATTGTTAGGGATAGACGTCCGTTTGGTACTCCAATGGATTTTGGACAGGTTTTTAATATGTATGACAATGAGCCCAGTACTGCTACTATCAAGAACGATCTCAGGGATCGTTATCAGGTGCTGCATCCGTTTGTGTATACGGTTACCGGTGGTCAGTATGCGTCCAAGGAACAGGCATTGGTCAGGAAGTTCTACAGGATTTACCAGCGTGTTACATACAACCATCAGGAAGATGCTAAATATGAGAACCACACTGAAAATGCTTTGTTGTTGTATATGGCATGTACTCATGCCTCAAATCCTGTGTATGCTACTTTGAAGATTCGAATCTATTTTTACGATTCGACTCAGAATTAATAAACATTAAATTTTATTTCATGATCTTCAATTACATCAATTGTCTGTTCTATTACATCGTTGAGTACATAATTGAAAGCCCTAATACAATTGTTGATACTAATTACACCTAGACTATCTAAGTACTTCAGTACATGGGTTCTAAAAACCCTTAAGAAACGCCAGGTCTGAGGACGTAAGGCTGTGTAGATCTTCAAGTTCAGGAAGCACTTGTGAATCCCCAGTTGCTTCCTGAGGTTGTGGTTGAATCTGACTTGGACATGGATGATGTCGTGGTTCCTGAAGAACGTCCTCTTGGTGTGTTCCATGATCTTGAAATAGAGGGGATTTGGCACCGTCCAGATATATGCGCCATTCCTTGCTTGAGCCGCAGTGATGCTCTCCCCGGTGCGTGAATCCATGGTCCGCACGGTTTATTGCCTTGTATATGCTGCAGCCGCAAGGAAGATCGAGTCTTCGTCTTCTAATCGGTCTGTGCTTGGCTATTCGGTGTTGCACCTTGACCGGAATAGAGTGGCTCCTCGAGGGTGATGAATGTTGCATTTTTTAGTGCCCACGCCTTTAATGCAGCATTTTTGTCCTCGTCCAAGTACTCTTTATATGATGATGTCGGTCCTGGATTGCAGAGGAAGATTGTAGGGATCCCACCTTTAATTTGAATTGGTTTCCCGTACTTCGTGTTGCTTTGCCAGTCCCTTTGGGCCCCCATGAATTCTTTAAAGTGCTTTAGGTAGTGGGGGTCGACATCATCAATGACGTTGTACCACGCGTCATTTGAATAAACCTTAGGGCTTAAGTCCAGGTGACCACACAAATAATTGTGTGGACCTAACGACCTAGCCCACATGGTCTTGCCGGTACGACTATCGCCCTCTATTACAATACTAATCGGTCTCCAAGGCCGCGCAGCGGCACTCTTCACATTCTCAGAGACCCAGACCCCAAGTTCCTCGGGAACTTGATTAAAAGAAGAAGAAAGAAAAGGAGAAACATAAACCTCCAATGGAGGTGTAAAAATCCTATCTAAATTTGAATTTAAATTATGAAACTGAAAAATATAATCTTTTGGGAGTTTCTCCCTTATTATTGCTAATGCAGCTTCTTTTGAACCTGCATTTAACGCCTCTGCACATGCGTCATTAGCATTCTGGCAGCCTCCCCTAGCACTTCTTCCGTCGACCTGGAACTGACCCCATTCAATGGTGTCTCCATCCTTGTCGATGTAGGACTTGACATCGGAGCTGGATTTAGCTCCCTGAATGTTTGGATGGAAATGTGTTGACCGGGTTGGGGATACCAGGTCGAAGAATCTCTGATTCGTGCAGTTGAATTTGCCTTCGAACTGCACGAGCACGTGGAGATGAGGGCTCCCATCCTCGTGCAATTCTCTGCAAATTTTTATGAATTTTTTATTGGTAGGGGTTTGCAGGTTCTGTAATTGGGAAAGTGCTTCCTCTTTGGTGAGAGAGCACTGTGGGTATGTTAAGAAATAATTTTTGGCTTTAATAGAGAAACGGCCGGCACGAGGCATTTTGGAATTGGGGGGCACTCAAAGTCTGAGGAATCGGGGGAACTGGGGGGCAATTTATATGGTGCCCCCCAAATGGCATTTTGGGAATTTCTGAAAAGATTTGAATTTCAAAATTCAAAATTCAAATTCTTAGCGGGCCTTCCGTATAATATT

Gene Information

NCBI Accession YP_001974393.1
Location 138-488
Gene Name AV2
Protein Name AV2 protein
Coding Region ATGTGGGACCCACTGGTCAATGAATTTCCAGAAACTGTACATGGTTTCAGGTCTATGCTTGCAATCAAGTATTTGCAGCTTGTAGAGGCTACGTATTCTCCCGATACGTTGGGGTACGATCTTATACGAGATCTCATACTGGTATTGCGAGCTAGGAGCTATGTCGAAGCGACCCGCCGATATAGTCATTTCCACACCCGCTTCCAAGGTGCGTCGGCGTCTGAACTTCGACAGCCCATACACCAGCCGTGCTGTTGCCCCCACTGTCCTCGTCACAAAGAAAAGGAGATTATGGGCCAATCGGCCCATGTACCGGAAGCCCAGACTGTACAGAATGTACAGAAGCCCTGA
Protein Sequence MWDPLVNEFPETVHGFRSMLAIKYLQLVEATYSPDTLGYDLIRDLILVLRARSYVEATRRYSHFHTRFQGASASELRQPIHQPCCCPHCPRHKEKEIMGQSAHVPEAQTVQNVQKP

NCBI Accession YP_001974394.1
Location 298-1071
Gene Name AV1
Protein Name capsid protein
Coding Region ATGTCGAAGCGACCCGCCGATATAGTCATTTCCACACCCGCTTCCAAGGTGCGTCGGCGTCTGAACTTCGACAGCCCATACACCAGCCGTGCTGTTGCCCCCACTGTCCTCGTCACAAAGAAAAGGAGATTATGGGCCAATCGGCCCATGTACCGGAAGCCCAGACTGTACAGAATGTACAGAAGCCCTGATGTTCCTAGGGGCTGTGAAGGCCCATGTAAGGTCCAGTCGTTTGAACAGAGGCATGACATAGCCCATACTGGGAAGGTTTTGTGTATTTCTGATGTTACTAGGGGTAATGGTATTACCCATAGGGTAGGAAAGAGGTTTTGTATTAAGTCTGTTTATATTTTAGGCAAAGTGTGGATGGATGAGAATATTAAGACCAAGAACCACACGAATAGTGTTATGTTTTTTATTGTTAGGGATAGACGTCCGTTTGGTACTCCAATGGATTTTGGACAGGTTTTTAATATGTATGACAATGAGCCCAGTACTGCTACTATCAAGAACGATCTCAGGGATCGTTATCAGGTGCTGCATCCGTTTGTGTATACGGTTACCGGTGGTCAGTATGCGTCCAAGGAACAGGCATTGGTCAGGAAGTTCTACAGGATTTACCAGCGTGTTACATACAACCATCAGGAAGATGCTAAATATGAGAACCACACTGAAAATGCTTTGTTGTTGTATATGGCATGTACTCATGCCTCAAATCCTGTGTATGCTACTTTGAAGATTCGAATCTATTTTTACGATTCGACTCAGAATTAA
Protein Sequence MSKRPADIVISTPASKVRRRLNFDSPYTSRAVAPTVLVTKKRRLWANRPMYRKPRLYRMYRSPDVPRGCEGPCKVQSFEQRHDIAHTGKVLCISDVTRGNGITHRVGKRFCIKSVYILGKVWMDENIKTKNHTNSVMFFIVRDRRPFGTPMDFGQVFNMYDNEPSTATIKNDLRDRYQVLHPFVYTVTGGQYASKEQALVRKFYRIYQRVTYNHQEDAKYENHTENALLLYMACTHASNPVYATLKIRIYFYDSTQN

NCBI Accession YP_001974395.1
Location 1068-1472
Gene Name AC3
Protein Name AC3 protein
Coding Region ATGGATTCACGCACCGGGGAGAGCATCACTGCGGCTCAAGCAAGGAATGGCGCATATATCTGGACGGTGCCAAATCCCCTCTATTTCAAGATCATGGAACACACCAAGAGGACGTTCTTCAGGAACCACGACATCATCCATGTCCAAGTCAGATTCAACCACAACCTCAGGAAGCAACTGGGGATTCACAAGTGCTTCCTGAACTTGAAGATCTACACAGCCTTACGTCCTCAGACCTGGCGTTTCTTAAGGGTTTTTAGAACCCATGTACTGAAGTACTTAGATAGTCTAGGTGTAATTAGTATCAACAATTGTATTAGGGCTTTCAATTATGTACTCAACGATGTAATAGAACAGACAATTGATGTAATTGAAGATCATGAAATAAAATTTAATGTTTATTAA
Protein Sequence MDSRTGESITAAQARNGAYIWTVPNPLYFKIMEHTKRTFFRNHDIIHVQVRFNHNLRKQLGIHKCFLNLKIYTALRPQTWRFLRVFRTHVLKYLDSLGVISINNCIRAFNYVLNDVIEQTIDVIEDHEIKFNVY

NCBI Accession YP_001974396.1
Location 1213-1614
Gene Name AC2
Protein Name AC2 protein
Coding Region ATGCAACATTCATCACCCTCGAGGAGCCACTCTATTCCGGTCAAGGTGCAACACCGAATAGCCAAGCACAGACCGATTAGAAGACGAAGACTCGATCTTCCTTGCGGCTGCAGCATATACAAGGCAATAAACCGTGCGGACCATGGATTCACGCACCGGGGAGAGCATCACTGCGGCTCAAGCAAGGAATGGCGCATATATCTGGACGGTGCCAAATCCCCTCTATTTCAAGATCATGGAACACACCAAGAGGACGTTCTTCAGGAACCACGACATCATCCATGTCCAAGTCAGATTCAACCACAACCTCAGGAAGCAACTGGGGATTCACAAGTGCTTCCTGAACTTGAAGATCTACACAGCCTTACGTCCTCAGACCTGGCGTTTCTTAAGGGTTTTTAG
Protein Sequence MQHSSPSRSHSIPVKVQHRIAKHRPIRRRRLDLPCGCSIYKAINRADHGFTHRGEHHCGSSKEWRIYLDGAKSPLFQDHGTHQEDVLQEPRHHPCPSQIQPQPQEATGDSQVLPELEDLHSLTSSDLAFLKGF

NCBI Accession YP_001974397.1
Location 1535-2602
Gene Name AC1
Protein Name AC1 protein
Coding Region ATGCCTCGTGCCGGCCGTTTCTCTATTAAAGCCAAAAATTATTTCTTAACATACCCACAGTGCTCTCTCACCAAAGAGGAAGCACTTTCCCAATTACAGAACCTGCAAACCCCTACCAATAAAAAATTCATAAAAATTTGCAGAGAATTGCACGAGGATGGGAGCCCTCATCTCCACGTGCTCGTGCAGTTCGAAGGCAAATTCAACTGCACGAATCAGAGATTCTTCGACCTGGTATCCCCAACCCGGTCAACACATTTCCATCCAAACATTCAGGGAGCTAAATCCAGCTCCGATGTCAAGTCCTACATCGACAAGGATGGAGACACCATTGAATGGGGTCAGTTCCAGGTCGACGGAAGAAGTGCTAGGGGAGGCTGCCAGAATGCTAATGACGCATGTGCAGAGGCGTTAAATGCAGGTTCAAAAGAAGCTGCATTAGCAATAATAAGGGAGAAACTCCCAAAAGATTATATTTTTCAGTTTCATAATTTAAATTCAAATTTAGATAGGATTTTTACACCTCCATTGGAGGTTTATGTTTCTCCTTTTCTTTCTTCTTCTTTTAATCAAGTTCCCGAGGAACTTGGGGTCTGGGTCTCTGAGAATGTGAAGAGTGCCGCTGCGCGGCCTTGGAGACCGATTAGTATTGTAATAGAGGGCGATAGTCGTACCGGCAAGACCATGTGGGCTAGGTCGTTAGGTCCACACAATTATTTGTGTGGTCACCTGGACTTAAGCCCTAAGGTTTATTCAAATGACGCGTGGTACAACGTCATTGATGATGTCGACCCCCACTACCTAAAGCACTTTAAAGAATTCATGGGGGCCCAAAGGGACTGGCAAAGCAACACGAAGTACGGGAAACCAATTCAAATTAAAGGTGGGATCCCTACAATCTTCCTCTGCAATCCAGGACCGACATCATCATATAAAGAGTACTTGGACGAGGACAAAAATGCTGCATTAAAGGCGTGGGCACTAAAAAATGCAACATTCATCACCCTCGAGGAGCCACTCTATTCCGGTCAAGGTGCAACACCGAATAGCCAAGCACAGACCGATTAG
Protein Sequence MPRAGRFSIKAKNYFLTYPQCSLTKEEALSQLQNLQTPTNKKFIKICRELHEDGSPHLHVLVQFEGKFNCTNQRFFDLVSPTRSTHFHPNIQGAKSSSDVKSYIDKDGDTIEWGQFQVDGRSARGGCQNANDACAEALNAGSKEAALAIIREKLPKDYIFQFHNLNSNLDRIFTPPLEVYVSPFLSSSFNQVPEELGVWVSENVKSAAARPWRPISIVIEGDSRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEYLDEDKNAALKAWALKNATFITLEEPLYSGQGATPNSQAQTD

NCBI Accession YP_001974398.1
Location 2188-2445
Gene Name AC4
Protein Name AC4 protein
Coding Region ATGGGAGCCCTCATCTCCACGTGCTCGTGCAGTTCGAAGGCAAATTCAACTGCACGAATCAGAGATTCTTCGACCTGGTATCCCCAACCCGGTCAACACATTTCCATCCAAACATTCAGGGAGCTAAATCCAGCTCCGATGTCAAGTCCTACATCGACAAGGATGGAGACACCATTGAATGGGGTCAGTTCCAGGTCGACGGAAGAAGTGCTAGGGGAGGCTGCCAGAATGCTAATGACGCATGTGCAGAGGCGTTAA
Protein Sequence MGALISTCSCSSKANSTARIRDSSTWYPQPGQHISIQTFRELNPAPMSSPTSTRMETPLNGVSSRSTEEVLGEAARMLMTHVQRR

References More References in PubMed

1

Genomic properties of allamanda leaf mottle distortion virus, a new begomovirus from golden trumpet (Allamanda cathartica) in India.

Jailani AAK, et al.  Arch Virol. 2021 Oct;166(10):2905-2909. doi: 10.1007/s00705-021-05179-8. Epub 2021 Aug 12.

PMID: 34383166
2

Molecular characterization of a distinct begomovirus infecting Allamanda cathartica in Guangdong, China.

He ZF, et al.  Arch Virol. 2009;154(8):1199-202. doi: 10.1007/s00705-009-0445-2. Epub 2009 Jul 16.

PMID: 19609637
3

Identification and molecular characterization of two begomoviruses from Pouzolzia zeylanica (L.) Benn. exhibiting yellow mosaic symptoms in adjacent regions of China and Vietnam.

Tang YF, et al.  Arch Virol. 2014 Oct;159(10):2799-803. doi: 10.1007/s00705-014-2049-8. Epub 2014 May 18.

PMID: 24838912