Allamanda leaf curl virus
Basic Information
| Genus |
Begomovirus
|
| NCBI Assembly |
GCF_000874545.1 |
| Isolate |
China |
| Release date |
2015/2/13 |
| Submitter |
He,Z.F., Mao,M.J., Yu,H., Li,H.P., Chen,X. |
| Host |
|
| Vector |
|
| Download |
Genome
|GFF3
|PEP
|CDS |
Genomic Organization
JBrowse
Genome
ACCGGAAGGCCCGCCGCCCATTTTAAAGTGGGCCCCCCCACTAAGTTTTGTCGGCCGATGGGAACGCTCCCTCAGAGTCTCTTTAAATGTACGTGTATGTATTTATACTTTTGTCTCTGTACCCTATACGTATTAAAATGTGGGACCCACTGGTCAATGAATTTCCAGAAACTGTACATGGTTTCAGGTCTATGCTTGCAATCAAGTATTTGCAGCTTGTAGAGGCTACGTATTCTCCCGATACGTTGGGGTACGATCTTATACGAGATCTCATACTGGTATTGCGAGCTAGGAGCTATGTCGAAGCGACCCGCCGATATAGTCATTTCCACACCCGCTTCCAAGGTGCGTCGGCGTCTGAACTTCGACAGCCCATACACCAGCCGTGCTGTTGCCCCCACTGTCCTCGTCACAAAGAAAAGGAGATTATGGGCCAATCGGCCCATGTACCGGAAGCCCAGACTGTACAGAATGTACAGAAGCCCTGATGTTCCTAGGGGCTGTGAAGGCCCATGTAAGGTCCAGTCGTTTGAACAGAGGCATGACATAGCCCATACTGGGAAGGTTTTGTGTATTTCTGATGTTACTAGGGGTAATGGTATTACCCATAGGGTAGGAAAGAGGTTTTGTATTAAGTCTGTTTATATTTTAGGCAAAGTGTGGATGGATGAGAATATTAAGACCAAGAACCACACGAATAGTGTTATGTTTTTTATTGTTAGGGATAGACGTCCGTTTGGTACTCCAATGGATTTTGGACAGGTTTTTAATATGTATGACAATGAGCCCAGTACTGCTACTATCAAGAACGATCTCAGGGATCGTTATCAGGTGCTGCATCCGTTTGTGTATACGGTTACCGGTGGTCAGTATGCGTCCAAGGAACAGGCATTGGTCAGGAAGTTCTACAGGATTTACCAGCGTGTTACATACAACCATCAGGAAGATGCTAAATATGAGAACCACACTGAAAATGCTTTGTTGTTGTATATGGCATGTACTCATGCCTCAAATCCTGTGTATGCTACTTTGAAGATTCGAATCTATTTTTACGATTCGACTCAGAATTAATAAACATTAAATTTTATTTCATGATCTTCAATTACATCAATTGTCTGTTCTATTACATCGTTGAGTACATAATTGAAAGCCCTAATACAATTGTTGATACTAATTACACCTAGACTATCTAAGTACTTCAGTACATGGGTTCTAAAAACCCTTAAGAAACGCCAGGTCTGAGGACGTAAGGCTGTGTAGATCTTCAAGTTCAGGAAGCACTTGTGAATCCCCAGTTGCTTCCTGAGGTTGTGGTTGAATCTGACTTGGACATGGATGATGTCGTGGTTCCTGAAGAACGTCCTCTTGGTGTGTTCCATGATCTTGAAATAGAGGGGATTTGGCACCGTCCAGATATATGCGCCATTCCTTGCTTGAGCCGCAGTGATGCTCTCCCCGGTGCGTGAATCCATGGTCCGCACGGTTTATTGCCTTGTATATGCTGCAGCCGCAAGGAAGATCGAGTCTTCGTCTTCTAATCGGTCTGTGCTTGGCTATTCGGTGTTGCACCTTGACCGGAATAGAGTGGCTCCTCGAGGGTGATGAATGTTGCATTTTTTAGTGCCCACGCCTTTAATGCAGCATTTTTGTCCTCGTCCAAGTACTCTTTATATGATGATGTCGGTCCTGGATTGCAGAGGAAGATTGTAGGGATCCCACCTTTAATTTGAATTGGTTTCCCGTACTTCGTGTTGCTTTGCCAGTCCCTTTGGGCCCCCATGAATTCTTTAAAGTGCTTTAGGTAGTGGGGGTCGACATCATCAATGACGTTGTACCACGCGTCATTTGAATAAACCTTAGGGCTTAAGTCCAGGTGACCACACAAATAATTGTGTGGACCTAACGACCTAGCCCACATGGTCTTGCCGGTACGACTATCGCCCTCTATTACAATACTAATCGGTCTCCAAGGCCGCGCAGCGGCACTCTTCACATTCTCAGAGACCCAGACCCCAAGTTCCTCGGGAACTTGATTAAAAGAAGAAGAAAGAAAAGGAGAAACATAAACCTCCAATGGAGGTGTAAAAATCCTATCTAAATTTGAATTTAAATTATGAAACTGAAAAATATAATCTTTTGGGAGTTTCTCCCTTATTATTGCTAATGCAGCTTCTTTTGAACCTGCATTTAACGCCTCTGCACATGCGTCATTAGCATTCTGGCAGCCTCCCCTAGCACTTCTTCCGTCGACCTGGAACTGACCCCATTCAATGGTGTCTCCATCCTTGTCGATGTAGGACTTGACATCGGAGCTGGATTTAGCTCCCTGAATGTTTGGATGGAAATGTGTTGACCGGGTTGGGGATACCAGGTCGAAGAATCTCTGATTCGTGCAGTTGAATTTGCCTTCGAACTGCACGAGCACGTGGAGATGAGGGCTCCCATCCTCGTGCAATTCTCTGCAAATTTTTATGAATTTTTTATTGGTAGGGGTTTGCAGGTTCTGTAATTGGGAAAGTGCTTCCTCTTTGGTGAGAGAGCACTGTGGGTATGTTAAGAAATAATTTTTGGCTTTAATAGAGAAACGGCCGGCACGAGGCATTTTGGAATTGGGGGGCACTCAAAGTCTGAGGAATCGGGGGAACTGGGGGGCAATTTATATGGTGCCCCCCAAATGGCATTTTGGGAATTTCTGAAAAGATTTGAATTTCAAAATTCAAAATTCAAATTCTTAGCGGGCCTTCCGTATAATATT
Gene Information
|
NCBI Accession
|
YP_001974393.1
|
|
Location
|
138-488 |
|
Gene Name
|
AV2 |
|
Protein Name
|
AV2 protein |
|
Coding Region
|
ATGTGGGACCCACTGGTCAATGAATTTCCAGAAACTGTACATGGTTTCAGGTCTATGCTTGCAATCAAGTATTTGCAGCTTGTAGAGGCTACGTATTCTCCCGATACGTTGGGGTACGATCTTATACGAGATCTCATACTGGTATTGCGAGCTAGGAGCTATGTCGAAGCGACCCGCCGATATAGTCATTTCCACACCCGCTTCCAAGGTGCGTCGGCGTCTGAACTTCGACAGCCCATACACCAGCCGTGCTGTTGCCCCCACTGTCCTCGTCACAAAGAAAAGGAGATTATGGGCCAATCGGCCCATGTACCGGAAGCCCAGACTGTACAGAATGTACAGAAGCCCTGA |
|
Protein Sequence
|
MWDPLVNEFPETVHGFRSMLAIKYLQLVEATYSPDTLGYDLIRDLILVLRARSYVEATRRYSHFHTRFQGASASELRQPIHQPCCCPHCPRHKEKEIMGQSAHVPEAQTVQNVQKP |
|
NCBI Accession
|
YP_001974394.1
|
|
Location
|
298-1071 |
|
Gene Name
|
AV1 |
|
Protein Name
|
capsid protein |
|
Coding Region
|
ATGTCGAAGCGACCCGCCGATATAGTCATTTCCACACCCGCTTCCAAGGTGCGTCGGCGTCTGAACTTCGACAGCCCATACACCAGCCGTGCTGTTGCCCCCACTGTCCTCGTCACAAAGAAAAGGAGATTATGGGCCAATCGGCCCATGTACCGGAAGCCCAGACTGTACAGAATGTACAGAAGCCCTGATGTTCCTAGGGGCTGTGAAGGCCCATGTAAGGTCCAGTCGTTTGAACAGAGGCATGACATAGCCCATACTGGGAAGGTTTTGTGTATTTCTGATGTTACTAGGGGTAATGGTATTACCCATAGGGTAGGAAAGAGGTTTTGTATTAAGTCTGTTTATATTTTAGGCAAAGTGTGGATGGATGAGAATATTAAGACCAAGAACCACACGAATAGTGTTATGTTTTTTATTGTTAGGGATAGACGTCCGTTTGGTACTCCAATGGATTTTGGACAGGTTTTTAATATGTATGACAATGAGCCCAGTACTGCTACTATCAAGAACGATCTCAGGGATCGTTATCAGGTGCTGCATCCGTTTGTGTATACGGTTACCGGTGGTCAGTATGCGTCCAAGGAACAGGCATTGGTCAGGAAGTTCTACAGGATTTACCAGCGTGTTACATACAACCATCAGGAAGATGCTAAATATGAGAACCACACTGAAAATGCTTTGTTGTTGTATATGGCATGTACTCATGCCTCAAATCCTGTGTATGCTACTTTGAAGATTCGAATCTATTTTTACGATTCGACTCAGAATTAA |
|
Protein Sequence
|
MSKRPADIVISTPASKVRRRLNFDSPYTSRAVAPTVLVTKKRRLWANRPMYRKPRLYRMYRSPDVPRGCEGPCKVQSFEQRHDIAHTGKVLCISDVTRGNGITHRVGKRFCIKSVYILGKVWMDENIKTKNHTNSVMFFIVRDRRPFGTPMDFGQVFNMYDNEPSTATIKNDLRDRYQVLHPFVYTVTGGQYASKEQALVRKFYRIYQRVTYNHQEDAKYENHTENALLLYMACTHASNPVYATLKIRIYFYDSTQN |
|
NCBI Accession
|
YP_001974395.1
|
|
Location
|
1068-1472 |
|
Gene Name
|
AC3 |
|
Protein Name
|
AC3 protein |
|
Coding Region
|
ATGGATTCACGCACCGGGGAGAGCATCACTGCGGCTCAAGCAAGGAATGGCGCATATATCTGGACGGTGCCAAATCCCCTCTATTTCAAGATCATGGAACACACCAAGAGGACGTTCTTCAGGAACCACGACATCATCCATGTCCAAGTCAGATTCAACCACAACCTCAGGAAGCAACTGGGGATTCACAAGTGCTTCCTGAACTTGAAGATCTACACAGCCTTACGTCCTCAGACCTGGCGTTTCTTAAGGGTTTTTAGAACCCATGTACTGAAGTACTTAGATAGTCTAGGTGTAATTAGTATCAACAATTGTATTAGGGCTTTCAATTATGTACTCAACGATGTAATAGAACAGACAATTGATGTAATTGAAGATCATGAAATAAAATTTAATGTTTATTAA |
|
Protein Sequence
|
MDSRTGESITAAQARNGAYIWTVPNPLYFKIMEHTKRTFFRNHDIIHVQVRFNHNLRKQLGIHKCFLNLKIYTALRPQTWRFLRVFRTHVLKYLDSLGVISINNCIRAFNYVLNDVIEQTIDVIEDHEIKFNVY |
|
NCBI Accession
|
YP_001974396.1
|
|
Location
|
1213-1614 |
|
Gene Name
|
AC2 |
|
Protein Name
|
AC2 protein |
|
Coding Region
|
ATGCAACATTCATCACCCTCGAGGAGCCACTCTATTCCGGTCAAGGTGCAACACCGAATAGCCAAGCACAGACCGATTAGAAGACGAAGACTCGATCTTCCTTGCGGCTGCAGCATATACAAGGCAATAAACCGTGCGGACCATGGATTCACGCACCGGGGAGAGCATCACTGCGGCTCAAGCAAGGAATGGCGCATATATCTGGACGGTGCCAAATCCCCTCTATTTCAAGATCATGGAACACACCAAGAGGACGTTCTTCAGGAACCACGACATCATCCATGTCCAAGTCAGATTCAACCACAACCTCAGGAAGCAACTGGGGATTCACAAGTGCTTCCTGAACTTGAAGATCTACACAGCCTTACGTCCTCAGACCTGGCGTTTCTTAAGGGTTTTTAG |
|
Protein Sequence
|
MQHSSPSRSHSIPVKVQHRIAKHRPIRRRRLDLPCGCSIYKAINRADHGFTHRGEHHCGSSKEWRIYLDGAKSPLFQDHGTHQEDVLQEPRHHPCPSQIQPQPQEATGDSQVLPELEDLHSLTSSDLAFLKGF |
|
NCBI Accession
|
YP_001974397.1
|
|
Location
|
1535-2602 |
|
Gene Name
|
AC1 |
|
Protein Name
|
AC1 protein |
|
Coding Region
|
ATGCCTCGTGCCGGCCGTTTCTCTATTAAAGCCAAAAATTATTTCTTAACATACCCACAGTGCTCTCTCACCAAAGAGGAAGCACTTTCCCAATTACAGAACCTGCAAACCCCTACCAATAAAAAATTCATAAAAATTTGCAGAGAATTGCACGAGGATGGGAGCCCTCATCTCCACGTGCTCGTGCAGTTCGAAGGCAAATTCAACTGCACGAATCAGAGATTCTTCGACCTGGTATCCCCAACCCGGTCAACACATTTCCATCCAAACATTCAGGGAGCTAAATCCAGCTCCGATGTCAAGTCCTACATCGACAAGGATGGAGACACCATTGAATGGGGTCAGTTCCAGGTCGACGGAAGAAGTGCTAGGGGAGGCTGCCAGAATGCTAATGACGCATGTGCAGAGGCGTTAAATGCAGGTTCAAAAGAAGCTGCATTAGCAATAATAAGGGAGAAACTCCCAAAAGATTATATTTTTCAGTTTCATAATTTAAATTCAAATTTAGATAGGATTTTTACACCTCCATTGGAGGTTTATGTTTCTCCTTTTCTTTCTTCTTCTTTTAATCAAGTTCCCGAGGAACTTGGGGTCTGGGTCTCTGAGAATGTGAAGAGTGCCGCTGCGCGGCCTTGGAGACCGATTAGTATTGTAATAGAGGGCGATAGTCGTACCGGCAAGACCATGTGGGCTAGGTCGTTAGGTCCACACAATTATTTGTGTGGTCACCTGGACTTAAGCCCTAAGGTTTATTCAAATGACGCGTGGTACAACGTCATTGATGATGTCGACCCCCACTACCTAAAGCACTTTAAAGAATTCATGGGGGCCCAAAGGGACTGGCAAAGCAACACGAAGTACGGGAAACCAATTCAAATTAAAGGTGGGATCCCTACAATCTTCCTCTGCAATCCAGGACCGACATCATCATATAAAGAGTACTTGGACGAGGACAAAAATGCTGCATTAAAGGCGTGGGCACTAAAAAATGCAACATTCATCACCCTCGAGGAGCCACTCTATTCCGGTCAAGGTGCAACACCGAATAGCCAAGCACAGACCGATTAG |
|
Protein Sequence
|
MPRAGRFSIKAKNYFLTYPQCSLTKEEALSQLQNLQTPTNKKFIKICRELHEDGSPHLHVLVQFEGKFNCTNQRFFDLVSPTRSTHFHPNIQGAKSSSDVKSYIDKDGDTIEWGQFQVDGRSARGGCQNANDACAEALNAGSKEAALAIIREKLPKDYIFQFHNLNSNLDRIFTPPLEVYVSPFLSSSFNQVPEELGVWVSENVKSAAARPWRPISIVIEGDSRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEYLDEDKNAALKAWALKNATFITLEEPLYSGQGATPNSQAQTD |
|
NCBI Accession
|
YP_001974398.1
|
|
Location
|
2188-2445 |
|
Gene Name
|
AC4 |
|
Protein Name
|
AC4 protein |
|
Coding Region
|
ATGGGAGCCCTCATCTCCACGTGCTCGTGCAGTTCGAAGGCAAATTCAACTGCACGAATCAGAGATTCTTCGACCTGGTATCCCCAACCCGGTCAACACATTTCCATCCAAACATTCAGGGAGCTAAATCCAGCTCCGATGTCAAGTCCTACATCGACAAGGATGGAGACACCATTGAATGGGGTCAGTTCCAGGTCGACGGAAGAAGTGCTAGGGGAGGCTGCCAGAATGCTAATGACGCATGTGCAGAGGCGTTAA |
|
Protein Sequence
|
MGALISTCSCSSKANSTARIRDSSTWYPQPGQHISIQTFRELNPAPMSSPTSTRMETPLNGVSSRSTEEVLGEAARMLMTHVQRR |