Malvastrum leaf curl Philippines virus
Basic Information
| Genus |
Begomovirus
|
| NCBI Assembly |
GCF_000909895.1 |
| Isolate |
Philippines |
| Release date |
2015/2/22 |
| Submitter |
She,X.M., He,Z.F. |
| Host |
|
| Vector |
|
| Download |
Genome
|GFF3
|PEP
|CDS |
Genomic Organization
JBrowse
Genome
ACCGGATGGCCCGCGAATTTTTTTTTTGGGCCCCGCCACTAAGTTTTGTCTGCCAATTGAAACGCTCCCTCAAAGCTTAATTATTTTTTTTGTCTTTATATAACTTGGTCGCTAAGTTGTATATGCATTAAAATGTGGGATCCACTTCTAAATGAGTTCCCTGAAACTGTACACGGTCTTAGGTGTATGCTTGCCGTAAAATATTGTCAGTTAATCGAACAGACATACTCTCCAGATACGGTTGGTTACGATCTTATACGAGATTTAATTTCAGTAATTCGTGCTCGCAATTATGTCGAAGCGTCCCGCCGATATAGTCATTTCCACTCCCGCCTCGAAGGTACGTCGCCGTCTGAACTTCGACACCCCCGTGATGAGCCGTGCTGCTGCCCCCACTGTCCTCGTCACCAACAAAAGAAGGACATGGACCAACAGGCCCATGTATCGCAAGCCCAGAATGTACAGAATGTACAGAAGCCCTGATGTACCCAAAGGTTGTGAAGGCCCATGTAAGGTCCAATCTTATGAACAGAGGCACGACATATCCCATGTTGGTAAAGTATTATGTGTTAGTGATGTCACCCGTGGTAGTGGGCTTACCCATCGCGTTGGTAAGAGATTTTGTGTGAAGTCCGTTTATGTATTGGGTAAAATATGGATGGATGAAAATATCAAAACCAAGAACCATACGAACACTGTGATGTTTTATCTTGTTCGTGATAGAAGGCCCTTTGGTACTGCTATGGATTTTGGTCAGGTGTTTAACATGTATGATAATGAGCCTAGTACTGCTACTATCAAGAATGATCTTCGAGATCGTTATCAAGTTTTAAGGAAATTCACTTCAACAGTCACAGGTGGTCAATATGCTTCTAAGGAACAGGCGTTGGTTAGGAAATTTATGAAGATTAATAATTATGTAGTTTATAATCATCAAGAAGCTGCTAAGTATGACAATCATACTGAGAATGCTTTGTTATTGTATATGGCTTGTACTCATGCCAGTAATCCAGTGTATGCTACTTTGAAGATCAGAATCTATTTTTATGATTCTGTTCAAAATTAATAAATATTGAATTTTATTATATCAGAAACTTGTACATCGATTGTTTTTTCAAATACATCGTACAGTACATGATCGACTGCCCTAATTACATTGTTAATGCTAATAACACCTAACCTATCTAAATATTTCATACATTGATATTTAAATACTCTTAAGAAACGCCCAGTCTGAGGATGTAAATGAGTCCAGATTTTGCAGATCAGAAAACACCGGTGTATCCCCAACGCTTTCCTCAGGTTGTAGTTGAACTGTATTTGGACTGTTATGATGTCGTGGTTTATTAGGAACGGTCTCTCGAGGTGTTGGGTTATCTTGAAATAGAGGGGATTTTTGATTGTCCAGGTATAAACGCCATTCTCTGCTTGAGCTGCAGTGATGAGTTCCCCTGTGCGAGAATCCATGTGATGCGCAATTAATCCCAAAATAGTAAGAGCAACCGCAGGGAAGATCAACTCGACGCCTGCGAATTGGTCTCCTCTTCGCTATTCTGTGCTGGACTTTGATGGGCACCTGAGTACAATGGTTGTGTGATGGTGATGAATTCAGCATTCTTTAATGCCCAGTCTTTGAGTGCTGAATTCTTTTCCTCGTCCAAGTATTCTTTATACGATGATGTTGGTCCTGGATTGCAGAGGAAGATTGTTGGGATCCCACCTTTAATTTGAATTGGTTTCCCGTACTTTGTGTTGCTTTGCCAGTCCCTCTGTGCCCCCATGAACTCTTTAAAGTGCTTTAGGAAGTGGGGGTCTACGTCATCAATGACGTTGTACCAGGCATCATTACTGTATACTTTTGGACTGAGGTCAAGATGACCACACAAATAATTATGTGGGCCTAACGATCTAGCCCACATTGTCTTCCCTGTACGACTATCACCCTCTACTACAATACTTACAGGCCTCCACGGCCGCGCAGCGGCATCCCTGACATTCTCGGAAACCCATTCTTCAAGTTCTTCTGGAACTTGATCAAAAGAAGAAGAAGAAAAAGGACAAACAAAAACCTCCAACGGAGGTGCAAAAATCCTATCTAAATTGGAATTTAAATTATGAAACTGTAAAACATAATCTTTAGGGGCTAATTCCCTAATTACATTAAGAGCCTCTGACTTACTTCCGCTGTTAAGCGCTTTGGCGTAAGCATCATTGGCTGATTGTTGCCCTCCTCTAGCACTTCTTCCATCGATCTGGAACTCTCCCCATTCCAGTGTGTCTCCGTCCTTGTTGATATAGGACTTGACGTCGGAGCTGGATTTAGCTCCCTGAATGTTTGGATGGAAATGTGCTGACCTGGTTTGGGATACCAGGTCGAAGAATCTGTTATTCTTGCACTGGAACTTGCCCTCGAACTGGATGAGCACGTGGAGATGAGGGTTCCCATTTTGGTGAAACTCTCTACAGATCTTGATATATTTTTTATTTGTTGGTGTAGTTAGGTTTTGTAGTTGGGAAAGTGCTTCGTCTTTAGTAAGAGAGCAATCTGGATAAGTGAGGAAAAAATTTTTGGCATTTATTCGAAATGAATTATTACGTGGCATATTGGCAATCGGTGTCTCTCAGAGTATTATGGCAATCGGTGTCTGGGGTCTTATTTATACCTAGACACCAAATGGCATTGTCGTAATTATCAATCAAACTTCAAATTTGAAACGCAAAAGCGGCCATCCGTTTAATATT
Gene Information
|
NCBI Accession
|
YP_008003511.1
|
|
Location
|
133-483 |
|
Gene Name
|
AV2 |
|
Protein Name
|
pre-coat protein |
|
Coding Region
|
ATGTGGGATCCACTTCTAAATGAGTTCCCTGAAACTGTACACGGTCTTAGGTGTATGCTTGCCGTAAAATATTGTCAGTTAATCGAACAGACATACTCTCCAGATACGGTTGGTTACGATCTTATACGAGATTTAATTTCAGTAATTCGTGCTCGCAATTATGTCGAAGCGTCCCGCCGATATAGTCATTTCCACTCCCGCCTCGAAGGTACGTCGCCGTCTGAACTTCGACACCCCCGTGATGAGCCGTGCTGCTGCCCCCACTGTCCTCGTCACCAACAAAAGAAGGACATGGACCAACAGGCCCATGTATCGCAAGCCCAGAATGTACAGAATGTACAGAAGCCCTGA |
|
Protein Sequence
|
MWDPLLNEFPETVHGLRCMLAVKYCQLIEQTYSPDTVGYDLIRDLISVIRARNYVEASRRYSHFHSRLEGTSPSELRHPRDEPCCCPHCPRHQQKKDMDQQAHVSQAQNVQNVQKP |
|
NCBI Accession
|
YP_008003512.1
|
|
Location
|
254-550 |
|
Gene Name
|
AC5 |
|
Protein Name
|
C5 protein |
|
Coding Region
|
ATGGGATATGTCGTGCCTCTGTTCATAAGATTGGACCTTACATGGGCCTTCACAACCTTTGGGTACATCAGGGCTTCTGTACATTCTGTACATTCTGGGCTTGCGATACATGGGCCTGTTGGTCCATGTCCTTCTTTTGTTGGTGACGAGGACAGTGGGGGCAGCAGCACGGCTCATCACGGGGGTGTCGAAGTTCAGACGGCGACGTACCTTCGAGGCGGGAGTGGAAATGACTATATCGGCGGGACGCTTCGACATAATTGCGAGCACGAATTACTGAAATTAAATCTCGTATAA |
|
Protein Sequence
|
MGYVVPLFIRLDLTWAFTTFGYIRASVHSVHSGLAIHGPVGPCPSFVGDEDSGGSSTAHHGGVEVQTATYLRGGSGNDYIGGTLRHNCEHELLKLNLV |
|
NCBI Accession
|
YP_008003513.1
|
|
Location
|
293-1066 |
|
Gene Name
|
AV1 |
|
Protein Name
|
coat protein |
|
Coding Region
|
ATGTCGAAGCGTCCCGCCGATATAGTCATTTCCACTCCCGCCTCGAAGGTACGTCGCCGTCTGAACTTCGACACCCCCGTGATGAGCCGTGCTGCTGCCCCCACTGTCCTCGTCACCAACAAAAGAAGGACATGGACCAACAGGCCCATGTATCGCAAGCCCAGAATGTACAGAATGTACAGAAGCCCTGATGTACCCAAAGGTTGTGAAGGCCCATGTAAGGTCCAATCTTATGAACAGAGGCACGACATATCCCATGTTGGTAAAGTATTATGTGTTAGTGATGTCACCCGTGGTAGTGGGCTTACCCATCGCGTTGGTAAGAGATTTTGTGTGAAGTCCGTTTATGTATTGGGTAAAATATGGATGGATGAAAATATCAAAACCAAGAACCATACGAACACTGTGATGTTTTATCTTGTTCGTGATAGAAGGCCCTTTGGTACTGCTATGGATTTTGGTCAGGTGTTTAACATGTATGATAATGAGCCTAGTACTGCTACTATCAAGAATGATCTTCGAGATCGTTATCAAGTTTTAAGGAAATTCACTTCAACAGTCACAGGTGGTCAATATGCTTCTAAGGAACAGGCGTTGGTTAGGAAATTTATGAAGATTAATAATTATGTAGTTTATAATCATCAAGAAGCTGCTAAGTATGACAATCATACTGAGAATGCTTTGTTATTGTATATGGCTTGTACTCATGCCAGTAATCCAGTGTATGCTACTTTGAAGATCAGAATCTATTTTTATGATTCTGTTCAAAATTAA |
|
Protein Sequence
|
MSKRPADIVISTPASKVRRRLNFDTPVMSRAAAPTVLVTNKRRTWTNRPMYRKPRMYRMYRSPDVPKGCEGPCKVQSYEQRHDISHVGKVLCVSDVTRGSGLTHRVGKRFCVKSVYVLGKIWMDENIKTKNHTNTVMFYLVRDRRPFGTAMDFGQVFNMYDNEPSTATIKNDLRDRYQVLRKFTSTVTGGQYASKEQALVRKFMKINNYVVYNHQEAAKYDNHTENALLLYMACTHASNPVYATLKIRIYFYDSVQN |
|
NCBI Accession
|
YP_008003514.1
|
|
Location
|
1063-1467 |
|
Gene Name
|
AC3 |
|
Protein Name
|
C3 protein |
|
Coding Region
|
ATGGATTCTCGCACAGGGGAACTCATCACTGCAGCTCAAGCAGAGAATGGCGTTTATACCTGGACAATCAAAAATCCCCTCTATTTCAAGATAACCCAACACCTCGAGAGACCGTTCCTAATAAACCACGACATCATAACAGTCCAAATACAGTTCAACTACAACCTGAGGAAAGCGTTGGGGATACACCGGTGTTTTCTGATCTGCAAAATCTGGACTCATTTACATCCTCAGACTGGGCGTTTCTTAAGAGTATTTAAATATCAATGTATGAAATATTTAGATAGGTTAGGTGTTATTAGCATTAACAATGTAATTAGGGCAGTCGATCATGTACTGTACGATGTATTTGAAAAAACAATCGATGTACAAGTTTCTGATATAATAAAATTCAATATTTATTAA |
|
Protein Sequence
|
MDSRTGELITAAQAENGVYTWTIKNPLYFKITQHLERPFLINHDIITVQIQFNYNLRKALGIHRCFLICKIWTHLHPQTGRFLRVFKYQCMKYLDRLGVISINNVIRAVDHVLYDVFEKTIDVQVSDIIKFNIY |
|
NCBI Accession
|
YP_008003515.1
|
|
Location
|
1208-1615 |
|
Gene Name
|
AC2 |
|
Protein Name
|
C2 protein |
|
Coding Region
|
ATGCTGAATTCATCACCATCACACAACCATTGTACTCAGGTGCCCATCAAAGTCCAGCACAGAATAGCGAAGAGGAGACCAATTCGCAGGCGTCGAGTTGATCTTCCCTGCGGTTGCTCTTACTATTTTGGGATTAATTGCGCATCACATGGATTCTCGCACAGGGGAACTCATCACTGCAGCTCAAGCAGAGAATGGCGTTTATACCTGGACAATCAAAAATCCCCTCTATTTCAAGATAACCCAACACCTCGAGAGACCGTTCCTAATAAACCACGACATCATAACAGTCCAAATACAGTTCAACTACAACCTGAGGAAAGCGTTGGGGATACACCGGTGTTTTCTGATCTGCAAAATCTGGACTCATTTACATCCTCAGACTGGGCGTTTCTTAAGAGTATTTAA |
|
Protein Sequence
|
MLNSSPSHNHCTQVPIKVQHRIAKRRPIRRRRVDLPCGCSYYFGINCASHGFSHRGTHHCSSSREWRLYLDNQKSPLFQDNPTPRETVPNKPRHHNSPNTVQLQPEESVGDTPVFSDLQNLDSFTSSDWAFLKSI |
|
NCBI Accession
|
YP_008003516.1
|
|
Location
|
1515-2603 |
|
Gene Name
|
AC1 |
|
Protein Name
|
C1 protein |
|
Coding Region
|
ATGCCACGTAATAATTCATTTCGAATAAATGCCAAAAATTTTTTCCTCACTTATCCAGATTGCTCTCTTACTAAAGACGAAGCACTTTCCCAACTACAAAACCTAACTACACCAACAAATAAAAAATATATCAAGATCTGTAGAGAGTTTCACCAAAATGGGAACCCTCATCTCCACGTGCTCATCCAGTTCGAGGGCAAGTTCCAGTGCAAGAATAACAGATTCTTCGACCTGGTATCCCAAACCAGGTCAGCACATTTCCATCCAAACATTCAGGGAGCTAAATCCAGCTCCGACGTCAAGTCCTATATCAACAAGGACGGAGACACACTGGAATGGGGAGAGTTCCAGATCGATGGAAGAAGTGCTAGAGGAGGGCAACAATCAGCCAATGATGCTTACGCCAAAGCGCTTAACAGCGGAAGTAAGTCAGAGGCTCTTAATGTAATTAGGGAATTAGCCCCTAAAGATTATGTTTTACAGTTTCATAATTTAAATTCCAATTTAGATAGGATTTTTGCACCTCCGTTGGAGGTTTTTGTTTGTCCTTTTTCTTCTTCTTCTTTTGATCAAGTTCCAGAAGAACTTGAAGAATGGGTTTCCGAGAATGTCAGGGATGCCGCTGCGCGGCCGTGGAGGCCTGTAAGTATTGTAGTAGAGGGTGATAGTCGTACAGGGAAGACAATGTGGGCTAGATCGTTAGGCCCACATAATTATTTGTGTGGTCATCTTGACCTCAGTCCAAAAGTATACAGTAATGATGCCTGGTACAACGTCATTGATGACGTAGACCCCCACTTCCTAAAGCACTTTAAAGAGTTCATGGGGGCACAGAGGGACTGGCAAAGCAACACAAAGTACGGGAAACCAATTCAAATTAAAGGTGGGATCCCAACAATCTTCCTCTGCAATCCAGGACCAACATCATCGTATAAAGAATACTTGGACGAGGAAAAGAATTCAGCACTCAAAGACTGGGCATTAAAGAATGCTGAATTCATCACCATCACACAACCATTGTACTCAGGTGCCCATCAAAGTCCAGCACAGAATAGCGAAGAGGAGACCAATTCGCAGGCGTCGAGTTGA |
|
Protein Sequence
|
MPRNNSFRINAKNFFLTYPDCSLTKDEALSQLQNLTTPTNKKYIKICREFHQNGNPHLHVLIQFEGKFQCKNNRFFDLVSQTRSAHFHPNIQGAKSSSDVKSYINKDGDTLEWGEFQIDGRSARGGQQSANDAYAKALNSGSKSEALNVIRELAPKDYVLQFHNLNSNLDRIFAPPLEVFVCPFSSSSFDQVPEELEEWVSENVRDAAARPWRPVSIVVEGDSRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHFLKHFKEFMGAQRDWQSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEYLDEEKNSALKDWALKNAEFITITQPLYSGAHQSPAQNSEEETNSQASS |
|
NCBI Accession
|
YP_008003517.1
|
|
Location
|
2156-2446 |
|
Gene Name
|
AC4 |
|
Protein Name
|
C4 protein |
|
Coding Region
|
ATGGGAACCCTCATCTCCACGTGCTCATCCAGTTCGAGGGCAAGTTCCAGTGCAAGAATAACAGATTCTTCGACCTGGTATCCCAAACCAGGTCAGCACATTTCCATCCAAACATTCAGGGAGCTAAATCCAGCTCCGACGTCAAGTCCTATATCAACAAGGACGGAGACACACTGGAATGGGGAGAGTTCCAGATCGATGGAAGAAGTGCTAGAGGAGGGCAACAATCAGCCAATGATGCTTACGCCAAAGCGCTTAACAGCGGAAGTAAGTCAGAGGCTCTTAATGTAA |
|
Protein Sequence
|
MGTLISTCSSSSRASSSARITDSSTWYPKPGQHISIQTFRELNPAPTSSPISTRTETHWNGESSRSMEEVLEEGNNQPMMLTPKRLTAEVSQRLLM |