Macroptilium yellow spot virus

Basic Information

Genus Begomovirus
NCBI Assembly GCF_000895435.1
Isolate Brazil
Release date 2015/2/22
Submitter Silva,S.J.C., Castillo-Urquiza,G.P., Hora,B.T. Jr., Assuncao,I.P., Lima,G.S.A., Pio-Ribeiro,G., Mizubuti,E.S.G., Zerbini,F.M.
Host
Vector
Download Genome |GFF3 |PEP |CDS

Genomic Organization

JBrowse

Genome

NC_016999
ACCGGATGGCCGCGCGATTTTTTATGGGCCTTTGATCTTTTGGGCTCGTTCTTTTGGACCGAGTGTATTTGAATTAAAGTCAGTTATTTTATTTGGTCCAATGAATATGCGTCTGACTAGCTTAGATATGCACAACTTGGTCCCCAAGTTGGTGGCTAACGGGTATATATGTTAAGAATAACTGACTACTTATTTAATTCAGAATGGTTAAGCGGGACGCCCCATGGCGCCACATGGCAGGAACCTCAAAGGTTTCCCGCAATAACAACTATTCCCCTCGTGGAGGTGGAGGTCCAAAAAACAACAGGGCCTCTGAATGGGTTAATAGGCCCATGTACAGAAAGCCCAGGATATATCGTATGTACAGAACCCCCGATGTGCCTAGGGGGTGTGAAGGCCCATGTAAGGTTCAGTCATTTGAACAGCGACACGATATATCCCATGTTGGTAAGGTTATATGCATGTCTGACGTGACAAGAGGTAATGGTATTACCCATCGTGTAGGAAAACGTTTTTGTGTGAAGTCTGTTTATATTCTAGGTAAGATATGGATGGACGAGAACATCAAGTTGAAGAATCACACGAACAGTGTGATGTTTTGGTTGGTCAGAGACAGAAGACCCTATGGCTCTCCCATGGACTTTGGCCAAGTGTTCAACATGTTTGACAACGAGCCCAGTACTGCTACGGTTAAGAACGATCTTCGTGATCGTTTTCAAGTCATGCATCGATTCTATGCCAAAGTCACTGGTGGACAGTATGCGAGCAACGAGCAAGCAATTGTCAGGCGTTTTTGGAAGGTCAACAATCATGTTGTCTACAACCACCAGGAAGCAGGGAAATACGAGAATCATACGGAGAACGCTTTACTATTGTATATGGCATGTACTCATGCCTCTAACCCCGTGTATGCAACCTTAAAAATTCGGATCTATTTTTATGATTCGATAACCAATTAATAAAATTTGAATTTTATTTCATGATTCTCAAGTACATAATTTACATATGATTTGTCTGTTGCAAATCGAACAGCTCTGATTACATTGTTAAGCGATACAACACCTATTCGTCCTAAGTACAACATGACTAAGTATTTAAACCTAACTAAATATGTCGTCCCAGAAGCTCTCAGGGATATCGTCCAGACTTGGAAATTGAGATATGCCTTGTGGAGAGCCAATGCTCTCCTGAGGTTGTGGTTGAACCTGATCTGGACGTGATATATTCTGGTTGTCGTGTATAGTGGATCCTCCACCTGTTTGATCTTGAAATAAAGGGGATTTGATATCTCCCAGATATAAACGCCACTCTCTGCCTGATGTGCAGTGATGAGTTCCCCTGTGCGTGAATCCATGTCCTCTGCAGTTGATATGGACGTATATGGAGCACCCGCAATCTATGTCAATTCGTCTTCTTCTGATTGCTCTCTTCTTGGCCGCTGTATGTTGAACCTTGATAGAGGGGGGAGTTGAGGAAGACGAATTGCGCATTGTGTATCGTCCACTGTCTAAGTGATGCGTTTTCTTCTTTGTCGAGGAACGATTTATAGCTGGCGCCCTCGCCAGGATTGCAAAGCACAATGCATGGGATTCCACCTTTAATTTGAACTGGCTTCCCGTATTTGCAATTTGATTGCCAGTCCTTTTGAGCACCTATCAATTCTTTCCAGTGCTTTAACTTTAGATATTGCGGTGCGATGTCATCTATCACGTTGTACTGCACATCATTTGAATAGACCTTTGAATTGAAATCGAGGTGACCACTCAAGTAATTATGGGACCCCAATGCACGTGCCCACATGGTCTTGCCCGTTCGAGAGTCACCCTCGATGATTATACTAATTGGTCTCTCCGGCCGCGCAGCGGCACTTCTTCCGAAATAGTCATCTGCCCAAGCTTTCATCTCTTCTGGGACATTAATGAAAGAAGAGAGTGGAAACGGAGGAGTCCATGGCTCCGGAGCCTTTTGAAATATACGATATGCGTTAGCCACAAGATTGTGATGTTGGAGGAAGAAGTGCTGTGGTTGTTCCTCCTTTATTATTTGAAGTGCTTCTTCTGCTGAAGAAGCATTTAACGCCTTTGCATATGTATCGTTAACTGTCTGTTGACCTCCTCGAGCAGATCGTCCGTCGATCTGAAAATCACCCCATTCGACGTAATCTCCGTCCTTCTCAATATATGATTTGGCGTCGGAGGATGACTTGCATGATTCGTATTTTCCATGACAAACATTTGAATGACTGGGATGTCGCAAGTCGAAGAATCTGCAATTCGTGCATGTGAACTTACCTTCGAATTGCAGCAAAGCATGGAGATGAGGCTCCCCATTTCCGTGTAATTCTCTGCATACACGGATATATTTCTTGTTTGTAGGTGTATCTAATGCTAGAAGTTGAGCAAGTGCCTCTTCTTTGGAGATAGAGCACTTGGGATAAGTAAGGAAATAATTTTTGGACTGAATTTTAAAACGTCTGGGCGGTGGCATATTTGTAAATAAAAGGATGTCTCCAAATGGCACTCTTGTAAATATGGGAGTGTCTCCAATTCCGCTCCGCTCAAACTTGCTCTATCAATTGGAGACTGGAGACAATTTATACTAGAACCCTCAATAGAACTTCTAATCATGTTCACACACGTGGCGGCCATCCGTATAATATT

Gene Information

NCBI Accession YP_005352895.1
Location 204-959
Protein Name coat protein
Coding Region ATGGTTAAGCGGGACGCCCCATGGCGCCACATGGCAGGAACCTCAAAGGTTTCCCGCAATAACAACTATTCCCCTCGTGGAGGTGGAGGTCCAAAAAACAACAGGGCCTCTGAATGGGTTAATAGGCCCATGTACAGAAAGCCCAGGATATATCGTATGTACAGAACCCCCGATGTGCCTAGGGGGTGTGAAGGCCCATGTAAGGTTCAGTCATTTGAACAGCGACACGATATATCCCATGTTGGTAAGGTTATATGCATGTCTGACGTGACAAGAGGTAATGGTATTACCCATCGTGTAGGAAAACGTTTTTGTGTGAAGTCTGTTTATATTCTAGGTAAGATATGGATGGACGAGAACATCAAGTTGAAGAATCACACGAACAGTGTGATGTTTTGGTTGGTCAGAGACAGAAGACCCTATGGCTCTCCCATGGACTTTGGCCAAGTGTTCAACATGTTTGACAACGAGCCCAGTACTGCTACGGTTAAGAACGATCTTCGTGATCGTTTTCAAGTCATGCATCGATTCTATGCCAAAGTCACTGGTGGACAGTATGCGAGCAACGAGCAAGCAATTGTCAGGCGTTTTTGGAAGGTCAACAATCATGTTGTCTACAACCACCAGGAAGCAGGGAAATACGAGAATCATACGGAGAACGCTTTACTATTGTATATGGCATGTACTCATGCCTCTAACCCCGTGTATGCAACCTTAAAAATTCGGATCTATTTTTATGATTCGATAACCAATTAA
Protein Sequence MVKRDAPWRHMAGTSKVSRNNNYSPRGGGGPKNNRASEWVNRPMYRKPRIYRMYRTPDVPRGCEGPCKVQSFEQRHDISHVGKVICMSDVTRGNGITHRVGKRFCVKSVYILGKIWMDENIKLKNHTNSVMFWLVRDRRPYGSPMDFGQVFNMFDNEPSTATVKNDLRDRFQVMHRFYAKVTGGQYASNEQAIVRRFWKVNNHVVYNHQEAGKYENHTENALLLYMACTHASNPVYATLKIRIYFYDSITN

NCBI Accession YP_005352896.1
Location 956-1354
Protein Name replication-enhancer protein
Coding Region ATGGATTCACGCACAGGGGAACTCATCACTGCACATCAGGCAGAGAGTGGCGTTTATATCTGGGAGATATCAAATCCCCTTTATTTCAAGATCAAACAGGTGGAGGATCCACTATACACGACAACCAGAATATATCACGTCCAGATCAGGTTCAACCACAACCTCAGGAGAGCATTGGCTCTCCACAAGGCATATCTCAATTTCCAAGTCTGGACGATATCCCTGAGAGCTTCTGGGACGACATATTTAGTTAGGTTTAAATACTTAGTCATGTTGTACTTAGGACGAATAGGTGTTGTATCGCTTAACAATGTAATCAGAGCTGTTCGATTTGCAACAGACAAATCATATGTAAATTATGTACTTGAGAATCATGAAATAAAATTCAAATTTTATTAA
Protein Sequence MDSRTGELITAHQAESGVYIWEISNPLYFKIKQVEDPLYTTTRIYHVQIRFNHNLRRALALHKAYLNFQVWTISLRASGTTYLVRFKYLVMLYLGRIGVVSLNNVIRAVRFATDKSYVNYVLENHEIKFKFY

NCBI Accession YP_005352897.1
Location 1101-1490
Protein Name transactivating protein
Coding Region ATGCGCAATTCGTCTTCCTCAACTCCCCCCTCTATCAAGGTTCAACATACAGCGGCCAAGAAGAGAGCAATCAGAAGAAGACGAATTGACATAGATTGCGGGTGCTCCATATACGTCCATATCAACTGCAGAGGACATGGATTCACGCACAGGGGAACTCATCACTGCACATCAGGCAGAGAGTGGCGTTTATATCTGGGAGATATCAAATCCCCTTTATTTCAAGATCAAACAGGTGGAGGATCCACTATACACGACAACCAGAATATATCACGTCCAGATCAGGTTCAACCACAACCTCAGGAGAGCATTGGCTCTCCACAAGGCATATCTCAATTTCCAAGTCTGGACGATATCCCTGAGAGCTTCTGGGACGACATATTTAGTTAG
Protein Sequence MRNSSSSTPPSIKVQHTAAKKRAIRRRRIDIDCGCSIYVHINCRGHGFTHRGTHHCTSGREWRLYLGDIKSPLFQDQTGGGSTIHDNQNISRPDQVQPQPQESIGSPQGISQFPSLDDIPESFWDDIFS

NCBI Accession YP_005352898.1
Location 1402-2487
Protein Name replication-associated protein
Coding Region ATGCCACCGCCCAGACGTTTTAAAATTCAGTCCAAAAATTATTTCCTTACTTATCCCAAGTGCTCTATCTCCAAAGAAGAGGCACTTGCTCAACTTCTAGCATTAGATACACCTACAAACAAGAAATATATCCGTGTATGCAGAGAATTACACGGAAATGGGGAGCCTCATCTCCATGCTTTGCTGCAATTCGAAGGTAAGTTCACATGCACGAATTGCAGATTCTTCGACTTGCGACATCCCAGTCATTCAAATGTTTGTCATGGAAAATACGAATCATGCAAGTCATCCTCCGACGCCAAATCATATATTGAGAAGGACGGAGATTACGTCGAATGGGGTGATTTTCAGATCGACGGACGATCTGCTCGAGGAGGTCAACAGACAGTTAACGATACATATGCAAAGGCGTTAAATGCTTCTTCAGCAGAAGAAGCACTTCAAATAATAAAGGAGGAACAACCACAGCACTTCTTCCTCCAACATCACAATCTTGTGGCTAACGCATATCGTATATTTCAAAAGGCTCCGGAGCCATGGACTCCTCCGTTTCCACTCTCTTCTTTCATTAATGTCCCAGAAGAGATGAAAGCTTGGGCAGATGACTATTTCGGAAGAAGTGCCGCTGCGCGGCCGGAGAGACCAATTAGTATAATCATCGAGGGTGACTCTCGAACGGGCAAGACCATGTGGGCACGTGCATTGGGGTCCCATAATTACTTGAGTGGTCACCTCGATTTCAATTCAAAGGTCTATTCAAATGATGTGCAGTACAACGTGATAGATGACATCGCACCGCAATATCTAAAGTTAAAGCACTGGAAAGAATTGATAGGTGCTCAAAAGGACTGGCAATCAAATTGCAAATACGGGAAGCCAGTTCAAATTAAAGGTGGAATCCCATGCATTGTGCTTTGCAATCCTGGCGAGGGCGCCAGCTATAAATCGTTCCTCGACAAAGAAGAAAACGCATCACTTAGACAGTGGACGATACACAATGCGCAATTCGTCTTCCTCAACTCCCCCCTCTATCAAGGTTCAACATACAGCGGCCAAGAAGAGAGCAATCAGAAGAAGACGAATTGA
Protein Sequence MPPPRRFKIQSKNYFLTYPKCSISKEEALAQLLALDTPTNKKYIRVCRELHGNGEPHLHALLQFEGKFTCTNCRFFDLRHPSHSNVCHGKYESCKSSSDAKSYIEKDGDYVEWGDFQIDGRSARGGQQTVNDTYAKALNASSAEEALQIIKEEQPQHFFLQHHNLVANAYRIFQKAPEPWTPPFPLSSFINVPEEMKAWADDYFGRSAAARPERPISIIIEGDSRTGKTMWARALGSHNYLSGHLDFNSKVYSNDVQYNVIDDIAPQYLKLKHWKELIGAQKDWQSNCKYGKPVQIKGGIPCIVLCNPGEGASYKSFLDKEENASLRQWTIHNAQFVFLNSPLYQGSTYSGQEESNQKKTN

NCBI Accession YP_005352899.1
Location 2073-2330
Protein Name AC4 protein
Coding Region ATGGGGAGCCTCATCTCCATGCTTTGCTGCAATTCGAAGGTAAGTTCACATGCACGAATTGCAGATTCTTCGACTTGCGACATCCCAGTCATTCAAATGTTTGTCATGGAAAATACGAATCATGCAAGTCATCCTCCGACGCCAAATCATATATTGAGAAGGACGGAGATTACGTCGAATGGGGTGATTTTCAGATCGACGGACGATCTGCTCGAGGAGGTCAACAGACAGTTAACGATACATATGCAAAGGCGTTAA
Protein Sequence MGSLISMLCCNSKVSSHARIADSSTCDIPVIQMFVMENTNHASHPPTPNHILRRTEITSNGVIFRSTDDLLEEVNRQLTIHMQRR

References More References in PubMed

1

Molecular characterization and experimental host range of an isolate of Macroptilium golden mosaic virus that infects Wissadula amplissima in Jamaica.

Collins A, et al.  Virus Res. 2010 Jun;150(1-2):148-52. doi: 10.1016/j.virusres.2010.03.008. Epub 2010 Mar 25.

PMID: 20347895
2

Tomato chlorotic mottle Guyane virus: a novel tomato-infecting bipartite begomovirus from French Guiana.

Lett JM, et al.  Arch Virol. 2015 Nov;160(11):2887-90. doi: 10.1007/s00705-015-2558-0. Epub 2015 Aug 9.

PMID: 26255054
3

Characterization of tomato leaf curl purple vein virus, a new monopartite New World begomovirus infecting tomato in Northeast Brazil.

Macedo MA, et al.  Arch Virol. 2018 Mar;163(3):737-743. doi: 10.1007/s00705-017-3662-0. Epub 2017 Dec 9.

PMID: 29224131
4

Contrasting genetic structure between two begomoviruses infecting the same leguminous hosts.

Sobrinho RR, et al.  J Gen Virol. 2014 Nov;95(Pt 11):2540-2552. doi: 10.1099/vir.0.067009-0. Epub 2014 Jul 15.

PMID: 25028472
5

Synonymous site variation due to recombination explains higher genetic variability in begomovirus populations infecting non-cultivated hosts.

Lima ATM, et al.  J Gen Virol. 2013 Feb;94(Pt 2):418-431. doi: 10.1099/vir.0.047241-0. Epub 2012 Nov 7.

PMID: 23136367