| Genus | Begomovirus | 
|---|---|
| NCBI Assembly | GCF_000848005.1 | 
| Isolate | Jamaica | 
| Release date | 2015/2/12 | 
| Submitter | Amarakoon,I.I., Roye,M.E., Briddon,R.W., Bedford,I.D., Stanley,J. | 
| Host | |
| Vector | |
| Download | Genome |GFF3 |PEP |CDS | 
            | NCBI Accession | YP_001876449.1 | 
|---|---|
| Location | 208-960 | 
| Gene Name | CP | 
| Protein Name | coat protein | 
| Coding Region | ATGCCCAAGAGGGATGCCCCGTGGCGTTTGATGGCGGGAACCTCAAAGGTTTCCCGCACTGGCAATTATTCTCGAAATGGTGGTTTGGGCCAATCCTCCAACAAAAACGCTTGGGTGAACAGGCCCATGTACAGGAAGCCCAGGATTTATCGGATGTACAGATCATCCGCTGTGCCCAAGGGATGTGAAGGACCTTGCAAGGTCCAATCCTATGAACAACGACATGATATATCTCATGTTGGTAAGGTGATATGTATTTCTGACATTACTCGTGGTAATGGTATTACTCATCGTGTAGGGAAGCGTTTTTGTGTGAAATCTGTGTATATTTTAGGGAAGATATGGATGGATGAGAACATCAAGCTCAAGAACCACACAAACAGCGTTATTTTTTGGTTGGTGCGTGATCGTCGTCCCTATGGAACACCTATGGACTTTGGACAGGTGTTCAACATGTTTGATAATGAGCCCAGTACAGCTACTGTGAAGAACGATCTTCGTGATCGTTTCCGAGTGATACACAGATTTCATGCTAAGGTGACTGGTGGCCAATATGCAAGTAATGAACAGGCATTGGTAAGGCGATTTTGGAAGGTGAACAACCATGTCGTGTACAACCACCAGGAATCCGGAAAATACGAGAATCATACGGAGAACGCCTTATTATTGTATATGGCATGTACACATGCCTCAAACCCTGTATATGCAACATTGAAAATTCGGATCTATTTCTATGATTCGATAACAAATTAA | 
| Protein Sequence | MPKRDAPWRLMAGTSKVSRTGNYSRNGGLGQSSNKNAWVNRPMYRKPRIYRMYRSSAVPKGCEGPCKVQSYEQRHDISHVGKVICISDITRGNGITHRVGKRFCVKSVYILGKIWMDENIKLKNHTNSVIFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATVKNDLRDRFRVIHRFHAKVTGGQYASNEQALVRRFWKVNNHVVYNHQESGKYENHTENALLLYMACTHASNPVYATLKIRIYFYDSITN | 
| NCBI Accession | YP_001876450.1 | 
|---|---|
| Location | 957-1355 | 
| Gene Name | REn | 
| Protein Name | replication enhancer protein | 
| Coding Region | ATGGATTCACGCACAGGGGAGAACATCACTGCGCGTCAGGCAGAGAATTCCGTTTTTATCTGGGAGGTTCCAAATCCCCCCTATTTCAAGATCATCATGGTGGAGGATCCACCATTCACTCGAACAAGGATCTACCACATACAAGTCAGAGCCAACCACAACGTGCGGAAAGTGTTGGGTCTCCACAAAGCCTTCTTCAACTTCCAAGTCTGGACGACATTAACGACAGCTTCTGGGACGACATATTTAAATAGATTTAAATATCTTGTTCATATGTATCCTGATCAAATAGGGCTTGTCGGAATAAACAATGTAATTAGAGCTGTTCGTTTTGCCACGGACAAATCATATGTAAATTATGTGCTCGAAAGTCATGAAATAAAATTCAAATTTTATTAA | 
| Protein Sequence | MDSRTGENITARQAENSVFIWEVPNPPYFKIIMVEDPPFTRTRIYHIQVRANHNVRKVLGLHKAFFNFQVWTTLTTASGTTYLNRFKYLVHMYPDQIGLVGINNVIRAVRFATDKSYVNYVLESHEIKFKFY | 
| NCBI Accession | YP_001876451.1 | 
|---|---|
| Location | 1102-1620 | 
| Gene Name | TrAP | 
| Protein Name | transcription activator protein | 
| Coding Region | ATGGAAAGCCGGTTCAAATTAAAGGAGGTATCCCTTCAATCGTGCTGTGCAATCCTGGTGAGGGTGCCAGTTATAAAGACTTCCTCGGTAAAGAAGAAAACCGAGCTTTACACAACTGGACCATTCATAATGCGCTATTCATCACCTTCACAGCCCCCCTCTATCAAAGCACAGCATCGCCTTGCCAAACGTAGGGCCATCCGTCGACGACGCTTAGACTTGAACTGCGGCTGTTCCATATTTCTCCATATCAATTGCCACGACCATGGATTCACGCACAGGGGAGAACATCACTGCGCGTCAGGCAGAGAATTCCGTTTTTATCTGGGAGGTTCCAAATCCCCCCTATTTCAAGATCATCATGGTGGAGGATCCACCATTCACTCGAACAAGGATCTACCACATACAAGTCAGAGCCAACCACAACGTGCGGAAAGTGTTGGGTCTCCACAAAGCCTTCTTCAACTTCCAAGTCTGGACGACATTAACGACAGCTTCTGGGACGACATATTTAAATAG | 
| Protein Sequence | MESRFKLKEVSLQSCCAILVRVPVIKTSSVKKKTELYTTGPFIMRYSSPSQPPSIKAQHRLAKRRAIRRRRLDLNCGCSIFLHINCHDHGFTHRGEHHCASGREFRFYLGGSKSPLFQDHHGGGSTIHSNKDLPHTSQSQPQRAESVGSPQSLLQLPSLDDINDSFWDDIFK | 
| NCBI Accession | YP_001876452.1 | 
|---|---|
| Location | 1427-2488 | 
| Gene Name | Rep | 
| Protein Name | replication-associated protein | 
| Coding Region | ATGCCACCACCAAAGAGATTTAGAGTGAGCGCAAAAAACTATTTCCTCACATATCCTCAGTGTTCTCTTTCAAAAGAAGAGGCTCTTTCCCAATTACAAAATATTTTCACTGCCACCAACAAGAAGTTCATCAAGATATGTGAGGAATTACACGAGGATGGGCAGCCTCATCTCCATGTGCTTATCCAGTTCGAAGGAAAATTCGTCCGCACGAATAACAGATTATTCGACCTGGTCTCCCCATCCCGGTCAGCACATTTCCATCCGAACATTCAGGGAGCTAAATCGAGCTCCGACGTCAAGTCCTATCTCGACAAGGATGGAGTCACAGTCGAATGGGGAGAATTCCAGGTCGACGGTCGAAGTGCTAGAGGAGGCTGCCAGAGTGCTAACGACTCATATGCCAAGGCATTGAATGCCTCATCAGTCGAACAGGCACTTCAAATATTAAAGGAGGAGCAGCCCAAGGATTATCTTCTCCAACATCATAACATCCGTTCTAACCTAGAACGGATCTTTACCAAGGTTCCGGAACCATGGGTTCCTCCATTTCACCTCTCCTCCTTTACTCACGTTCCGGCTGAGATGCAAGCGTGGGTCGATGGTTATTTCGGAAGGGGTGCCGCTGCGCGGCCGGAGAGATATATGAGTATCATCGTCGAGGGTGACTCAAGAACAGGCAAAACAATGTGGGCTCGTTCATTGGGACCACACAATTATCTCATGGGTCACCTCGACTTCAATTCGCGTGTCTATTCCAATGCCGCTGAGTACAACGTCATTGATGACATAAGCCCCAATTATTTGAAATTAAAGCATTGGAAAGAGTTAATTGGGGCTCAAAGGGACTGGCAGTCAAACTGTAAATATGGAAAGCCGGTTCAAATTAAAGGAGGTATCCCTTCAATCGTGCTGTGCAATCCTGGTGAGGGTGCCAGTTATAAAGACTTCCTCGGTAAAGAAGAAAACCGAGCTTTACACAACTGGACCATTCATAATGCGCTATTCATCACCTTCACAGCCCCCCTCTATCAAAGCACAGCATCGCCTTGCCAAACGTAG | 
| Protein Sequence | MPPPKRFRVSAKNYFLTYPQCSLSKEEALSQLQNIFTATNKKFIKICEELHEDGQPHLHVLIQFEGKFVRTNNRLFDLVSPSRSAHFHPNIQGAKSSSDVKSYLDKDGVTVEWGEFQVDGRSARGGCQSANDSYAKALNASSVEQALQILKEEQPKDYLLQHHNIRSNLERIFTKVPEPWVPPFHLSSFTHVPAEMQAWVDGYFGRGAAARPERYMSIIVEGDSRTGKTMWARSLGPHNYLMGHLDFNSRVYSNAAEYNVIDDISPNYLKLKHWKELIGAQRDWQSNCKYGKPVQIKGGIPSIVLCNPGEGASYKDFLGKEENRALHNWTIHNALFITFTAPLYQSTASPCQT | 
| NCBI Accession | YP_001876453.1 | 
|---|---|
| Location | 2074-2331 | 
| Gene Name | AC4 | 
| Protein Name | AC4 protein | 
| Coding Region | ATGGGCAGCCTCATCTCCATGTGCTTATCCAGTTCGAAGGAAAATTCGTCCGCACGAATAACAGATTATTCGACCTGGTCTCCCCATCCCGGTCAGCACATTTCCATCCGAACATTCAGGGAGCTAAATCGAGCTCCGACGTCAAGTCCTATCTCGACAAGGATGGAGTCACAGTCGAATGGGGAGAATTCCAGGTCGACGGTCGAAGTGCTAGAGGAGGCTGCCAGAGTGCTAACGACTCATATGCCAAGGCATTGA | 
| Protein Sequence | MGSLISMCLSSSKENSSARITDYSTWSPHPGQHISIRTFRELNRAPTSSPISTRMESQSNGENSRSTVEVLEEAARVLTTHMPRH | 
| NCBI Accession | YP_001876454.1 | 
|---|---|
| Location | 361-1128 | 
| Gene Name | NSP | 
| Protein Name | nuclear shuttle protein | 
| Coding Region | ATGTCTTTTGTAAAATACAGGTATGGTGCATCATATACGACAAGACGTTTTTTACGTCAACAGGCTACTAAGAAAAGGAGTGCTGTTAAACGCAATGATTTTAAGCGTGGTTACAGACAAGTGAGCAAGTCTAATGAAGAGGCAAAGATGATTAGCCAATCATTGCATGAAAATCAGCTTGGTCCTGATTTTGTTATGACTCACAATAACGCTCTATCTACGTTCATTAATTTTCCATGTTTGGGTAAGACTTTACCCAACCGAAACAGGTCATATATTAAGTTGAAACGCTTGCGTTTCAAAGGTACGGTGAAGATAGAGCGTGTTCATGTGGATGTTAATATGGATGGTTTATCCCCTAAGATTGAAGGCGTATTTTCGCTTGTTATCGTCATCGACCGGAAACCACATCTTAACCCGAATGGCTGTCTACACTCATTTGATGAACTATTTGGAGCAAGGATACACAGCCATGGAAATCTTGCCATTACGTCGTCATTGAAAGATCGTTACTACATTCGTCATGTGTTCAAGAGTGTTATTTCTGTGATCAAAGACACTACAATGATCGACGTTGAGGGTTCCACTTTGTTGTCTAATAGGCGTTCGAACATGTGGTCGAGTTTTAAGGATCATGATCATGACTCTTGTAATGGTGTTTATGACAATATTAGCAAGAACGCCATATTAGTTTATTATTGTTGGATGTCCGACACCAACTCCAAGGCTTCCACTTTTGTATCGTTTGACCTTGACTATGTTGGATGA | 
| Protein Sequence | MSFVKYRYGASYTTRRFLRQQATKKRSAVKRNDFKRGYRQVSKSNEEAKMISQSLHENQLGPDFVMTHNNALSTFINFPCLGKTLPNRNRSYIKLKRLRFKGTVKIERVHVDVNMDGLSPKIEGVFSLVIVIDRKPHLNPNGCLHSFDELFGARIHSHGNLAITSSLKDRYYIRHVFKSVISVIKDTTMIDVEGSTLLSNRRSNMWSSFKDHDHDSCNGVYDNISKNAILVYYCWMSDTNSKASTFVSFDLDYVG | 
| NCBI Accession | YP_001876455.1 | 
|---|---|
| Location | 1196-2077 | 
| Gene Name | MP | 
| Protein Name | movement protein | 
| Coding Region | ATGGATTCTCAGTTAGCTTGTCCACCGAGTGCCTTTAATTATATTGAGTCTCATAGGGATGAATATCAGCTGTCTCATGATCTAACTGAGATAGTCCTTCAATTTCCTTCCACCGCTTCACAATTAACAGCTAGACTCAGTCGTAGTTGTATGAAAATCGACCATTGCGTCATAGAATATAGGCAACAGGTGCCTATCAACGCCACTGGAGCAGTCATAGTGGAGATTCATGACAAGAGAATGACGGACAACGAGTCCTTACAAGCTTCATGGACTTTTCCCATCCGGTGCAACATCGATCTCCACTATTTTTCATCGTCTTTCTTCTCGTTAAAAGACCCAATACCATGGAAACTCTATTACAGAGTTTCCGATACGAATGTCCATCAGAGAACACATTTCGCCAAATTCAAGGGAAAACTGAAATTATCAACGGCCAAACATTCAGTTGATATCCCATTCAGGGCTCCAACAGTCAAGATCCTCTCAAAACAGTTTTCCAATAGAGATGTCGATTTTTCTCATGTGGACTATGGGCGGTGGGAAAGGAAATTGATCAGGTCCGCATCGACTAACCAGTTTGGACTACATGGCCCAATTGAATTAAAACCAGGAGAGTCTTGGGCCACAAAAAGTTCAATAGGAGTGTCTCATACCGATGCGGACTCTGAATTAGAAAACGCAATACACCCATACAGACAACTAAACAGGCTCGGAACAAGCGTCCTAGACCCGGGAGATTCAGCATCAATTGTAGGAGCACAGAGGGCCCAATCAAACATAACAATGTCAATGACCCAATTAAGCGAGATTGTTAAGGCGACAGTTCAAGAATGTATTAACAGTAATTGTATCCCTTCTCAGCCAAAGTCGTTGAAATAA | 
| Protein Sequence | MDSQLACPPSAFNYIESHRDEYQLSHDLTEIVLQFPSTASQLTARLSRSCMKIDHCVIEYRQQVPINATGAVIVEIHDKRMTDNESLQASWTFPIRCNIDLHYFSSSFFSLKDPIPWKLYYRVSDTNVHQRTHFAKFKGKLKLSTAKHSVDIPFRAPTVKILSKQFSNRDVDFSHVDYGRWERKLIRSASTNQFGLHGPIELKPGESWATKSSIGVSHTDADSELENAIHPYRQLNRLGTSVLDPGDSASIVGAQRAQSNITMSMTQLSEIVKATVQECINSNCIPSQPKSLK | 
| 1 | 
                             Macroptilium yellow mosaic virus, a New Begomovirus Infecting Macroptilium lathyroides in Cuba. Ramos PL, et al. Plant Dis. 2002 Sep;86(9):1049. doi: 10.1094/PDIS.2002.86.9.1049B. PMID: 30818538  | 
                    
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| 2 | 
                            
                             Bracero V, et al. Plant Dis. 2003 Sep;87(9):1022-1025. doi: 10.1094/PDIS.2003.87.9.1022. PMID: 30812812  | 
                    
| 3 | 
                            
                             Collins A, et al. Virus Res. 2010 Jun;150(1-2):148-52. doi: 10.1016/j.virusres.2010.03.008. Epub 2010 Mar 25. PMID: 20347895  | 
                    
| 4 | 
                            
                             Idris AM, et al. Plant Dis. 1999 Nov;83(11):1071. doi: 10.1094/PDIS.1999.83.11.1071C. PMID: 30841284  | 
                    
| 5 | 
                             First Report of Bean common mosaic virus in Cudrania tricuspidata in Korea. Seo JK, et al. Plant Dis. 2015 Feb;99(2):292. doi: 10.1094/PDIS-07-14-0678-PDN. PMID: 30699581  | 
                    
| 6 | 
                            
                             Idris AM, et al. Plant Dis. 2002 May;86(5):558. doi: 10.1094/PDIS.2002.86.5.558C. PMID: 30818684  | 
                    
| 7 | 
                            
                             Batista JG, et al. Arch Virol. 2022 Jul;167(7):1597-1602. doi: 10.1007/s00705-022-05410-0. Epub 2022 May 14. PMID: 35562613  | 
                    
| 8 | 
                             Two Newly Described Begomoviruses of Macroptilium lathyroides and Common Bean. Idris AM, et al. Phytopathology. 2003 Jul;93(7):774-83. doi: 10.1094/PHYTO.2003.93.7.774. PMID: 18943157  | 
                    
| 9 | 
                             Contrasting genetic structure between two begomoviruses infecting the same leguminous hosts. Sobrinho RR, et al. J Gen Virol. 2014 Nov;95(Pt 11):2540-2552. doi: 10.1099/vir.0.067009-0. Epub 2014 Jul 15. PMID: 25028472  | 
                    
| 10 | 
                            
                             Roye ME, et al. Plant Dis. 1997 Nov;81(11):1251-1258. doi: 10.1094/PDIS.1997.81.11.1251. PMID: 30861729  |