Genus | Begomovirus |
---|---|
NCBI Assembly | GCF_000846245.1 |
Isolate | Puerto Rico |
Release date | 2015/2/12 |
Submitter | Brown,J.K., Idris,A.M., Hiebert,E., Bird,J. |
Vector | |
Download | Genome |GFF3 |PEP |CDS |
NCBI Accession | NP_671458.1 |
---|---|
Location | 197-946 |
Gene Name | AV1 |
Protein Name | coat protein |
Coding Region | ATGCCTAAGCGGGATGCCCCGTGGCGCTCTTCTGCGGGAACCTCTAAGGTTAGCCGTAATTTGAATTATTCTCCCGGGGGAGGCCCAAAATCCAACAGGGCCAATGCATGGGTTAATAGGCCCATGTACAGGAAGCCCAGGATATATCGGATGTACAGGACTCCCGATGTTCCTAGAGGCTGTGAAGGACCCTGTAAAATCCAGTCGTTTGAACAACGCCATGATGTGTCTCATATTGGTAAGGTTATGTGTATATCTGATGTTACACGTGGTAACGGTATTACTCATCGCGTTGGCAAACGTTTCTGTGTTAAGTCTGTTTACATTTTAGGCAAAGTTTGGATGGACGACAACATCAAGTTGAAGAATCATACCAACAGTGTAATGTTTTGGTTGGTTAGGGATCGAAGACCATATGGCACTCCTATGGAATTTGGTCAAGTATTTAATATGTTTGATAATGAGCCTAGCACTGCTACTATTAAGAACGATTTACGAGATCGTTTCCAGGTCATGCACAAGTTTTATTCAAAGGTTACAGGTGGACAATATGCAAGTAATGAACAGTCGCTGGTTAAGCGATTTTGGAAGGTTAACAACCATGTTGTGTATAATCATCAAGAAGCTGCTAAGTACGAGAACCATACTGAGAACGCATTATTGTTGTATATGGCATGTACACATGCTTCTAATCCTGTATATGCTACTTTGAAAATTCGGATATATTTTTACGATTCGATAATGAATTAA |
Protein Sequence | MPKRDAPWRSSAGTSKVSRNLNYSPGGGPKSNRANAWVNRPMYRKPRIYRMYRTPDVPRGCEGPCKIQSFEQRHDVSHIGKVMCISDVTRGNGITHRVGKRFCVKSVYILGKVWMDDNIKLKNHTNSVMFWLVRDRRPYGTPMEFGQVFNMFDNEPSTATIKNDLRDRFQVMHKFYSKVTGGQYASNEQSLVKRFWKVNNHVVYNHQEAAKYENHTENALLLYMACTHASNPVYATLKIRIYFYDSIMN |
NCBI Accession | NP_671459.1 |
---|---|
Location | 943-1341 |
Gene Name | AC3 |
Protein Name | replication enhancer |
Coding Region | ATGGATTCACGCACAGGGGAACCCATCACTGCAGTTCAAGCAACGAATGGCGTTTTTATTTGGGAGATTATAAATCCCCTCTATTTCAAAATAATCAACGTGGAGAAGCCAATGTACACGAACAGCACGGTGTTCGACATTCAAATCCGAGCCAACCACAACCTGAGGAAAGCGTTGGCTCTCCACAAAGCCTTCTTCAATTTCCAAGTCTGGACGACATTGACGACAGCTTCTGGGCAGATTTATTTAAATAGATTTAAATACCTTGTACTGTCTTATTTAGATAATTTAGGAGTTATTTCAATTAACAATGTAATCAAAGCTGTCTCATATGCAACGGACAGAAGTTATGTAAATGACGTGCTTGAAAATCATGAAATAAAATTCAAATTTTATTAA |
Protein Sequence | MDSRTGEPITAVQATNGVFIWEIINPLYFKIINVEKPMYTNSTVFDIQIRANHNLRKALALHKAFFNFQVWTTLTTASGQIYLNRFKYLVLSYLDNLGVISINNVIKAVSYATDRSYVNDVLENHEIKFKFY |
NCBI Accession | NP_671460.1 |
---|---|
Location | 1088-1504 |
Gene Name | AC2 |
Protein Name | transactivation protein Trap |
Coding Region | ATGACTGGGCACAGAAAAACGCCATCTACGTCTCCATTGAGGAACCACTCTACTCCACCTTCAATCAAACCGCGTCATCGTCACGCCAAGAGACAGACTCGACGTAGAAGGTTAGATCTAGAGTGTGGCTGTTCAATATACATTCATATTAGTTGCGCAAATCATGGATTCACGCACAGGGGAACCCATCACTGCAGTTCAAGCAACGAATGGCGTTTTTATTTGGGAGATTATAAATCCCCTCTATTTCAAAATAATCAACGTGGAGAAGCCAATGTACACGAACAGCACGGTGTTCGACATTCAAATCCGAGCCAACCACAACCTGAGGAAAGCGTTGGCTCTCCACAAAGCCTTCTTCAATTTCCAAGTCTGGACGACATTGACGACAGCTTCTGGGCAGATTTATTTAAATAG |
Protein Sequence | MTGHRKTPSTSPLRNHSTPPSIKPRHRHAKRQTRRRRLDLECGCSIYIHISCANHGFTHRGTHHCSSSNEWRFYLGDYKSPLFQNNQRGEANVHEQHGVRHSNPSQPQPEESVGSPQSLLQFPSLDDIDDSFWADLFK |
NCBI Accession | NP_671461.1 |
---|---|
Location | 1398-2474 |
Gene Name | AC1 |
Protein Name | replication-associated protein |
Coding Region | ATGCCACCACCAAAGAGATTTAGAGTGAGCTCAAAGAACTACTTTCTCACATATCCTCGATGTTCTATTTCAAAAGAAGAAACCCTCTCACAATTGCTTAATATACAGACTCCAACAGATAAGAAGTACATCAAGATTTGCGAAGAATTACACGAAGATGGGCAACCTCATCTTCACGTGCTTATTCAGTTCGAAGGAAAATTCGTCTGCACAAATCAAAGATTATTCGACTTGGTATCCCCAACACGGTCAACACATTTCCATCCGAACATACAGGGAGTTAAATCAAGTTCAGATGTTAAAGCATACATCGACAAGGATGGAGTCACCATTGAATGGGGCCAATTCCAGATCGACGGTAGATCTGCAAGAGGAGGACAACAATCCGCAAACGACTCATATGCAAAAGCGTTAAATGCAGATTGTATTGAAGCTGCAATGACGGTATTAAAAGAAGAACAGCCAAAAGATTTCGTTGTCCAATATCACAACATCCGTTCTAATCTGGAGAAAATATTCACACCACCAACGGAACCGTGGGTTCCTCCATTTCAGTTATCCACTTTCAACAATGTCCCTTTAATTATGTCGGACTGGGTTAACGAAAATATTTCCGATTCCGCTGCGCGGCCGTTGAGACCTATATCAATCATCGTTGAAGGACCATCAAGAACAGGCAAGACAATATGGGCCCGAAGTCTGGGTCCTCACAATTACCTATGTGGTCATATCGATCTCAACCCGAGAATTTACTCCAATCATGCATGGTATAACGTCATAGATGACGTTGATCCGCATTATCTGAAACACTTTAAAGAGTTCATGGGGGCCCAACGTGATTGGCAATCAAACTGCAAATACGGAAAGCCAATTCAAATTAAAGGAGGAATTCCCACTATCTTCCTATGCAATCCTGGCCCCCATTCATCATATAAAGAGTATCTCAGCGAAGAGAAAAACAAATCACTCAATGACTGGGCACAGAAAAACGCCATCTACGTCTCCATTGAGGAACCACTCTACTCCACCTTCAATCAAACCGCGTCATCGTCACGCCAAGAGACAGACTCGACGTAG |
Protein Sequence | MPPPKRFRVSSKNYFLTYPRCSISKEETLSQLLNIQTPTDKKYIKICEELHEDGQPHLHVLIQFEGKFVCTNQRLFDLVSPTRSTHFHPNIQGVKSSSDVKAYIDKDGVTIEWGQFQIDGRSARGGQQSANDSYAKALNADCIEAAMTVLKEEQPKDFVVQYHNIRSNLEKIFTPPTEPWVPPFQLSTFNNVPLIMSDWVNENISDSAARPLRPISIIVEGPSRTGKTIWARSLGPHNYLCGHIDLNPRIYSNHAWYNVIDDVDPHYLKHFKEFMGAQRDWQSNCKYGKPIQIKGGIPTIFLCNPGPHSSYKEYLSEEKNKSLNDWAQKNAIYVSIEEPLYSTFNQTASSSRQETDST |
NCBI Accession | NP_671462.1 |
---|---|
Location | 2060-2317 |
Gene Name | AC4 |
Protein Name | hypothetical protein |
Coding Region | ATGGGCAACCTCATCTTCACGTGCTTATTCAGTTCGAAGGAAAATTCGTCTGCACAAATCAAAGATTATTCGACTTGGTATCCCCAACACGGTCAACACATTTCCATCCGAACATACAGGGAGTTAAATCAAGTTCAGATGTTAAAGCATACATCGACAAGGATGGAGTCACCATTGAATGGGGCCAATTCCAGATCGACGGTAGATCTGCAAGAGGAGGACAACAATCCGCAAACGACTCATATGCAAAAGCGTTAA |
Protein Sequence | MGNLIFTCLFSSKENSSAQIKDYSTWYPQHGQHISIRTYRELNQVQMLKHTSTRMESPLNGANSRSTVDLQEEDNNPQTTHMQKR |
NCBI Accession | NP_671463.1 |
---|---|
Location | 346-1113 |
Gene Name | BV1 |
Protein Name | movement protein |
Coding Region | ATGTATTCGTCAAGACAAAGACGTCAAACTTCTTACCCACGAGGAGGTTATTCACGTAATCATCTTTCTAAGCGTTCAACTATTGGTAAACGTAATAATGGTAGACGTCGACCTAATAATTTTGGTAAGGTTATTGATGAACCCAAAATGTTGGTTCAACGTATACATGAGAACCAATTTGGACCTGATTTTGTTATGACTCATAATACATCCATTTCTACATTTATTAGTTTTCCTGCTCTTGGTAAGTCTGAGCCCAATCGTTGTAGGCAATATATTAAATTGAAACGTTTACGTTTCAAAGGAACCGTTAAGATCGAGCGTGTTCATGCTGATGTGAATATGGATGGTTTATCACCTAAGATTGAAGGCGTATTCTCTCTGGTTATAGTGGTTGATCGTAGACCTCATCTTACTCCAAGTGGATGCTTACACACCTTTGATGAACTATTTGGTGCAAGAATCCACAGTCACGGTAACTTGGCCATAACATCTTCATTGAAAGACCGTTATTATATTCGCCATGTGTTTAAACGAGTTATATCCGTTGAGAAAGACACGATGATGATCGACGTTGATGGTGGAACGGTCTTGTCTAATAGGCGTTTTAATTTTTGGTCGACGTTTAAAGATCTTGACCATGATTCATGTAACGGTGTATATGACAACATAAGCAAGAACGCCATTTTAGTTTATTATTGTTGGATGTCGGACACAATGTCTAAGGCATCGACATTTGTATCATTTGACCTTGATTATGTTGGCTAA |
Protein Sequence | MYSSRQRRQTSYPRGGYSRNHLSKRSTIGKRNNGRRRPNNFGKVIDEPKMLVQRIHENQFGPDFVMTHNTSISTFISFPALGKSEPNRCRQYIKLKRLRFKGTVKIERVHADVNMDGLSPKIEGVFSLVIVVDRRPHLTPSGCLHTFDELFGARIHSHGNLAITSSLKDRYYIRHVFKRVISVEKDTMMIDVDGGTVLSNRRFNFWSTFKDLDHDSCNGVYDNISKNAILVYYCWMSDTMSKASTFVSFDLDYVG |
NCBI Accession | NP_671464.1 |
---|---|
Location | 1172-2053 |
Gene Name | BC1 |
Protein Name | movement protein |
Coding Region | ATGGATTCTCAGTTAGCAAATCCTCCAAATGCATTTAATTATATTGAATCTCACAGGGATGAATATCAACTGTCTCATGACCTAACTGAAATCCTTCTTCAATTCCCCTCAACAACATCGCAATTATCGGCAAGACTCAGTCGTAGCTGTATGAAAATCGATCATTGCGTTATAGAATACAGACAACAAGTTCCTATAAACGCGACGGGTTCAGTAATAGTGGAGATTCATGATAGAAGAATGACAGACAATGAGTCTTTACAAGCTTCATGGACTTTTCCTTTAAGATGCAACATAGATCTCCACTATTTCTCTTCATCCTTCTTCTCGCTGAAAGACCCAATTCCATGGAAATTGTATTACAGAGTCTGTGATACAAATGTTCATCAAAGGACGCATTTTGCCAAATTCAAAGGCAAACTCAAACTGTCTACGGCGAAACATTCAGTGGATATTCCTTTCCGGGCACCAACTGTAAAAATACTTTCCAAACAATTTACGAATAAGGACGTGGATTTTTCGCACGTAGACTATGGGAGGTGGGAAAGGAAAATAATAAGGTCCGCATCTTTATCAAGATATGAGCTTCAGGGCCCAATTGAATTAAGACCAGGTGAGTCTTGGGCTTCAAGAAGCACAATAGGAATATCGCACACGGATGCGGACTCCGAATTAGAGAACGCAATACACCCATACAGAGATCTCAACAGGCTAGGAACCACCGCACTAGATCCAGGTGATTCGGCTTCGATAGTGGGTGCAAACAAAGCCCAATCAAACATCACATTATCAATGGCCCAAATAAACGAAATTGTTAGGTCAACAGTACATGAATGTATTAATAATAATTGTACTCCTTGTCTACCGAAATCTTTCAAATAA |
Protein Sequence | MDSQLANPPNAFNYIESHRDEYQLSHDLTEILLQFPSTTSQLSARLSRSCMKIDHCVIEYRQQVPINATGSVIVEIHDRRMTDNESLQASWTFPLRCNIDLHYFSSSFFSLKDPIPWKLYYRVCDTNVHQRTHFAKFKGKLKLSTAKHSVDIPFRAPTVKILSKQFTNKDVDFSHVDYGRWERKIIRSASLSRYELQGPIELRPGESWASRSTIGISHTDADSELENAIHPYRDLNRLGTTALDPGDSASIVGANKAQSNITLSMAQINEIVRSTVHECINNNCTPCLPKSFK |
1 |
Idris AM, et al. Plant Dis. 1999 Nov;83(11):1071. doi: 10.1094/PDIS.1999.83.11.1071C. PMID: 30841284 |
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2 |
Idris AM, et al. Plant Dis. 2002 May;86(5):558. doi: 10.1094/PDIS.2002.86.5.558C. PMID: 30818684 |
3 |
Bracero V, et al. Plant Dis. 2003 Sep;87(9):1022-1025. doi: 10.1094/PDIS.2003.87.9.1022. PMID: 30812812 |
4 |
Two Newly Described Begomoviruses of Macroptilium lathyroides and Common Bean. Idris AM, et al. Phytopathology. 2003 Jul;93(7):774-83. doi: 10.1094/PHYTO.2003.93.7.774. PMID: 18943157 |
5 |
Rodriguez RL, et al. Plant Dis. 2001 Oct;85(10):1119. doi: 10.1094/PDIS.2001.85.10.1119C. PMID: 30823289 |