Jatropha mosaic Nigeria virus

Basic Information

Genus Begomovirus
NCBI Assembly GCF_000900435.1
Isolate Nigeria
Release date 2015/2/22
Submitter Kashina,B.D., Alegbejo,M.D., Banwo,O.O., Nielsen,S.L., Nicolaisen,M.
Host
Vector
Download Genome |GFF3 |PEP |CDS

Genomic Organization

JBrowse

Genome

NC_019034
ACCGGATGGCCGCGCGATACCCGCTCAACGTGGTCCCCACGTGACAAGACATGTCGGCCACTCATGATGCGTCTGTTGAGGTTAGATATGTGTGGTCCCAGGATAAAAACTTCGTCACGAAGTTGGTGAGTCACACAATGTGGGACCCTTTAAGAAATGAATTTCCAGAAACCCTTCATGGGTTTCGTTGTATGTTGGCTGTGAAGTTTTTGCAGGCTCTTGTGGATAGTTACAGTCCGGATACGAAGGGATACGAATACATACGGGATCTTATATGTATTCTACGCTCGCGACATTATAATGAAGCGAACATACGATATGGCCTTCTCGTCTCCCGTATCCAATGTACGCCGGCGTCTCAACTTCGGGAGTCCTCTGGCGTTACCTGCTCCTGCGAGCACTGCCCCCGGCACTTCAAGAAGACGGGCCTGGAGAAACAGGCCCATGAACAGGAAGCCCAGGTTCTACCGGACGTTTAGGAGCCCAGACGTCCCTCGTGGATGTGAAGGCCCATGTAAGGTCCAGTCCTATGAGCAACGCGATGATGTGAAACACACCGGTGTTGTGCGGTGTGTTAGTGATGTTACCCGTGGTTCTGGTATTACCCATCGGGTAGGTAAGCGTTTTTGCATCAAGTCCATCTATATTCTCGGGAAGATTTGGATGGATGAGAATATCAAGAAGCAGAACCACACGAACCAGGTTATGTTTTATTTGGTGCGTGATCGTAGACCCTATGGGACGAGTCCAATGGACTTTGGACAAGTGTTTAACATGTTTGACAACGAGCCGTCAACGGCCACTGTGAAGAACGATCTGCGAGATCGCTTCCAGGTGCTACGGAAGTTCTATGCTACTGTCACTGGTGGTCCTTCGGGAATGAAGGAACAGGCTTTAGTTAAGAGGTTCTTTAGGATTAACAATCATGTTGTTTACAACCATCAGGAACAGGCGAAGTATGAGAATCATACTGAGAACGCGTTATTATTGTATTTGGCATGTACGCATGCTTCGAATCCTGTGTATGCAACGCTGAAGATACGCATCTATTTTTACGATGCCGTCACGAATTAATAAAATTTAAATTTTATTTCATGAAATTCCTGAACTTCGATACAAGTCCTAATTACATTATGTAATACATGATCGACAGATCTAATAACATTATTAATGGAAATTACACCTAACATGTCTAAGTACTTAAGGACTTGGTATTTAAATACTCTCAAGAAAGTCCCAGACCGAGTCTGTGAAGTCGTCCAGATTCGGAAGTTCAGATAACACTTGTGAAGACCCAGTTCCTTCCGGAGGTTGTGGTTGAACCGGATCTGGATGGTGATGATGTCGTGGTTGGTGTTGAATGGCCGCACGCTCTGCTCCGTGGTCGTGAAATATAGGGGATTGTTTATCTCCCAGATAAACACGCCATTCCCTGCTTGAGGAGCAGTGATGTACTCCCCGGTGCGTGAATCCATGGTTAGCACAGTTGAGATGTAGATAGTATGAGCAGCCGCACTCGAGATCGATGCGTCTACGACGTATTCTCTTGGTCTTCGCGATTCTGTGCTTGACTTTGATTGGTACCGGAGTAGAGTGGCTCACTGATGGTGATGAATGTTGCATTTTGAAGTGTCCACCGCTTCAAAGCTGAGTTCTTCTCTTCCTCCAAGAACTCTTTATAGGACGATGTCGGGCCAGGATTGCAGAGGAAGATTGTCGGGATTCCGCCTTTAATTTGAATTGGCTTGCCGTATTTCGTGTTGCTTTGCCAATCACGCTGGGCCCCCATGAACTCTTTGAAATGTTTTAGATAGTGCGGATCCACGTCGTCGATGATGTTGTACCAGGCGTCATTTGAATAGACCTTGGGACTAATGTCCAAATGACCACATAAGTAATTATGTGGACCCAGGCTTCGTGCCCACATTGTTTTGCCCGTACGACTATCGCCCTCGATAACAATACTTTTAGGTCTCCATGGCCGCGCAGCGGCTGCCTTCACATTGTCGGCTACCCACTGCTCAAGTTCGTCCGGAACTTGATCAAATGAAGAGGACATAAAAGGAGATCTATAAATCTCTACGGGAGGAGTGAATATCCTCTCTAAATTGGAATTAAGATTATGAAATTGTAATACATAATCCTTTGGGGCTAATTCTTTAATTAGTCGTAGGGCTTCAGACTTACTGCCTGCGTTCAGCGCCTGTGCGTAAGCATCGTTTATTGATTGTTTGCCTCCTCTCGCTGATCGTCTATCGATCTGGAATTGGCCCCAGTCGAGGACGTCTCCGTCCTTCTCAAGATATGCCTTGACATCGGAGCTAGACTTAGCTCCCTGAATGTTCGGATGGAAATGTGCTGACCTGGTTGGGGATACCAAGTCGAACAATCTGCAATTCGTGAGTCGGACTTTGCCCTCGAATTGGACGAGCACATGCAGATGAGGTTCCCCATTTTGATGCAGTTCTCTGCAGATTCTTATGAATTTGGGGTTTGAAGGGAGTGACAGATTGGTTAATTGCGAAAGAGTTTCTTCTTTCGATAACGAGCACTGCGGATATGTAAGAAATAAGTTCTTACAATTAATTTGGAATTTTTTTGGAGCGTTAGGCATGTTGACTTTGTATGGGTACCCTTGACCGCTCTCGTCTAATCCTCGGGTGCAATTATATTGGTACCCATATATAGGGGGGGTACCAAATGGCACGCTGGTAATTTTTACAACTTCATGTTTGAAATTCAAAGTTTGAAAGTTCCACTAGCGGCCATCCGTATAATATT

Gene Information

NCBI Accession YP_006905835.1
Location 138-479
Protein Name V2
Coding Region ATGTGGGACCCTTTAAGAAATGAATTTCCAGAAACCCTTCATGGGTTTCGTTGTATGTTGGCTGTGAAGTTTTTGCAGGCTCTTGTGGATAGTTACAGTCCGGATACGAAGGGATACGAATACATACGGGATCTTATATGTATTCTACGCTCGCGACATTATAATGAAGCGAACATACGATATGGCCTTCTCGTCTCCCGTATCCAATGTACGCCGGCGTCTCAACTTCGGGAGTCCTCTGGCGTTACCTGCTCCTGCGAGCACTGCCCCCGGCACTTCAAGAAGACGGGCCTGGAGAAACAGGCCCATGAACAGGAAGCCCAGGTTCTACCGGACGTTTAG
Protein Sequence MWDPLRNEFPETLHGFRCMLAVKFLQALVDSYSPDTKGYEYIRDLICILRSRHYNEANIRYGLLVSRIQCTPASQLRESSGVTCSCEHCPRHFKKTGLEKQAHEQEAQVLPDV

NCBI Accession YP_006905836.1
Location 301-1074
Protein Name V1
Coding Region ATGAAGCGAACATACGATATGGCCTTCTCGTCTCCCGTATCCAATGTACGCCGGCGTCTCAACTTCGGGAGTCCTCTGGCGTTACCTGCTCCTGCGAGCACTGCCCCCGGCACTTCAAGAAGACGGGCCTGGAGAAACAGGCCCATGAACAGGAAGCCCAGGTTCTACCGGACGTTTAGGAGCCCAGACGTCCCTCGTGGATGTGAAGGCCCATGTAAGGTCCAGTCCTATGAGCAACGCGATGATGTGAAACACACCGGTGTTGTGCGGTGTGTTAGTGATGTTACCCGTGGTTCTGGTATTACCCATCGGGTAGGTAAGCGTTTTTGCATCAAGTCCATCTATATTCTCGGGAAGATTTGGATGGATGAGAATATCAAGAAGCAGAACCACACGAACCAGGTTATGTTTTATTTGGTGCGTGATCGTAGACCCTATGGGACGAGTCCAATGGACTTTGGACAAGTGTTTAACATGTTTGACAACGAGCCGTCAACGGCCACTGTGAAGAACGATCTGCGAGATCGCTTCCAGGTGCTACGGAAGTTCTATGCTACTGTCACTGGTGGTCCTTCGGGAATGAAGGAACAGGCTTTAGTTAAGAGGTTCTTTAGGATTAACAATCATGTTGTTTACAACCATCAGGAACAGGCGAAGTATGAGAATCATACTGAGAACGCGTTATTATTGTATTTGGCATGTACGCATGCTTCGAATCCTGTGTATGCAACGCTGAAGATACGCATCTATTTTTACGATGCCGTCACGAATTAA
Protein Sequence MKRTYDMAFSSPVSNVRRRLNFGSPLALPAPASTAPGTSRRRAWRNRPMNRKPRFYRTFRSPDVPRGCEGPCKVQSYEQRDDVKHTGVVRCVSDVTRGSGITHRVGKRFCIKSIYILGKIWMDENIKKQNHTNQVMFYLVRDRRPYGTSPMDFGQVFNMFDNEPSTATVKNDLRDRFQVLRKFYATVTGGPSGMKEQALVKRFFRINNHVVYNHQEQAKYENHTENALLLYLACTHASNPVYATLKIRIYFYDAVTN

NCBI Accession YP_006905837.1
Location 1071-1475
Protein Name C3
Coding Region ATGGATTCACGCACCGGGGAGTACATCACTGCTCCTCAAGCAGGGAATGGCGTGTTTATCTGGGAGATAAACAATCCCCTATATTTCACGACCACGGAGCAGAGCGTGCGGCCATTCAACACCAACCACGACATCATCACCATCCAGATCCGGTTCAACCACAACCTCCGGAAGGAACTGGGTCTTCACAAGTGTTATCTGAACTTCCGAATCTGGACGACTTCACAGACTCGGTCTGGGACTTTCTTGAGAGTATTTAAATACCAAGTCCTTAAGTACTTAGACATGTTAGGTGTAATTTCCATTAATAATGTTATTAGATCTGTCGATCATGTATTACATAATGTAATTAGGACTTGTATCGAAGTTCAGGAATTTCATGAAATAAAATTTAAATTTTATTAA
Protein Sequence MDSRTGEYITAPQAGNGVFIWEINNPLYFTTTEQSVRPFNTNHDIITIQIRFNHNLRKELGLHKCYLNFRIWTTSQTRSGTFLRVFKYQVLKYLDMLGVISINNVIRSVDHVLHNVIRTCIEVQEFHEIKFKFY

NCBI Accession YP_006905838.1
Location 1216-1623
Protein Name C2
Coding Region ATGCAACATTCATCACCATCAGTGAGCCACTCTACTCCGGTACCAATCAAAGTCAAGCACAGAATCGCGAAGACCAAGAGAATACGTCGTAGACGCATCGATCTCGAGTGCGGCTGCTCATACTATCTACATCTCAACTGTGCTAACCATGGATTCACGCACCGGGGAGTACATCACTGCTCCTCAAGCAGGGAATGGCGTGTTTATCTGGGAGATAAACAATCCCCTATATTTCACGACCACGGAGCAGAGCGTGCGGCCATTCAACACCAACCACGACATCATCACCATCCAGATCCGGTTCAACCACAACCTCCGGAAGGAACTGGGTCTTCACAAGTGTTATCTGAACTTCCGAATCTGGACGACTTCACAGACTCGGTCTGGGACTTTCTTGAGAGTATTTAA
Protein Sequence MQHSSPSVSHSTPVPIKVKHRIAKTKRIRRRRIDLECGCSYYLHLNCANHGFTHRGVHHCSSSREWRVYLGDKQSPIFHDHGAERAAIQHQPRHHHHPDPVQPQPPEGTGSSQVLSELPNLDDFTDSVWDFLESI

NCBI Accession YP_006905839.1
Location 1532-2614
Protein Name C1
Coding Region ATGCCTAACGCTCCAAAAAAATTCCAAATTAATTGTAAGAACTTATTTCTTACATATCCGCAGTGCTCGTTATCGAAAGAAGAAACTCTTTCGCAATTAACCAATCTGTCACTCCCTTCAAACCCCAAATTCATAAGAATCTGCAGAGAACTGCATCAAAATGGGGAACCTCATCTGCATGTGCTCGTCCAATTCGAGGGCAAAGTCCGACTCACGAATTGCAGATTGTTCGACTTGGTATCCCCAACCAGGTCAGCACATTTCCATCCGAACATTCAGGGAGCTAAGTCTAGCTCCGATGTCAAGGCATATCTTGAGAAGGACGGAGACGTCCTCGACTGGGGCCAATTCCAGATCGATAGACGATCAGCGAGAGGAGGCAAACAATCAATAAACGATGCTTACGCACAGGCGCTGAACGCAGGCAGTAAGTCTGAAGCCCTACGACTAATTAAAGAATTAGCCCCAAAGGATTATGTATTACAATTTCATAATCTTAATTCCAATTTAGAGAGGATATTCACTCCTCCCGTAGAGATTTATAGATCTCCTTTTATGTCCTCTTCATTTGATCAAGTTCCGGACGAACTTGAGCAGTGGGTAGCCGACAATGTGAAGGCAGCCGCTGCGCGGCCATGGAGACCTAAAAGTATTGTTATCGAGGGCGATAGTCGTACGGGCAAAACAATGTGGGCACGAAGCCTGGGTCCACATAATTACTTATGTGGTCATTTGGACATTAGTCCCAAGGTCTATTCAAATGACGCCTGGTACAACATCATCGACGACGTGGATCCGCACTATCTAAAACATTTCAAAGAGTTCATGGGGGCCCAGCGTGATTGGCAAAGCAACACGAAATACGGCAAGCCAATTCAAATTAAAGGCGGAATCCCGACAATCTTCCTCTGCAATCCTGGCCCGACATCGTCCTATAAAGAGTTCTTGGAGGAAGAGAAGAACTCAGCTTTGAAGCGGTGGACACTTCAAAATGCAACATTCATCACCATCAGTGAGCCACTCTACTCCGGTACCAATCAAAGTCAAGCACAGAATCGCGAAGACCAAGAGAATACGTCGTAG
Protein Sequence MPNAPKKFQINCKNLFLTYPQCSLSKEETLSQLTNLSLPSNPKFIRICRELHQNGEPHLHVLVQFEGKVRLTNCRLFDLVSPTRSAHFHPNIQGAKSSSDVKAYLEKDGDVLDWGQFQIDRRSARGGKQSINDAYAQALNAGSKSEALRLIKELAPKDYVLQFHNLNSNLERIFTPPVEIYRSPFMSSSFDQVPDELEQWVADNVKAAAARPWRPKSIVIEGDSRTGKTMWARSLGPHNYLCGHLDISPKVYSNDAWYNIIDDVDPHYLKHFKEFMGAQRDWQSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEFLEEEKNSALKRWTLQNATFITISEPLYSGTNQSQAQNREDQENTS

NCBI Accession YP_006905840.1
Location 2221-2454
Protein Name C4
Coding Region ATGGGGAACCTCATCTGCATGTGCTCGTCCAATTCGAGGGCAAAGTCCGACTCACGAATTGCAGATTGTTCGACTTGGTATCCCCAACCAGGTCAGCACATTTCCATCCGAACATTCAGGGAGCTAAGTCTAGCTCCGATGTCAAGGCATATCTTGAGAAGGACGGAGACGTCCTCGACTGGGGCCAATTCCAGATCGATAGACGATCAGCGAGAGGAGGCAAACAATCAATAA
Protein Sequence MGNLICMCSSNSRAKSDSRIADCSTWYPQPGQHISIRTFRELSLAPMSRHILRRTETSSTGANSRSIDDQREEANNQ

References More References in PubMed

1

First Report of the Occurrence of African cassava mosaic virus in a Mosaic Disease of Soybean in Nigeria.

Mgbechi-Ezeri JU, et al.  Plant Dis. 2008 Dec;92(12):1709. doi: 10.1094/PDIS-92-12-1709B.

PMID: 30764308
2

Molecular identification of a new begomovirus associated with mosaic disease of Jatropha curcas L. in Nigeria.

Kashina BD, et al.  Arch Virol. 2013 Feb;158(2):511-4. doi: 10.1007/s00705-012-1512-7. Epub 2012 Oct 17.

PMID: 23074041
3

First report of a complete genome sequence for a begomovirus infecting Jatropha gossypifolia in the Americas.

Simmonds-Gordon RN, et al.  Arch Virol. 2014 Oct;159(10):2815-8. doi: 10.1007/s00705-014-2112-5. Epub 2014 May 29.

PMID: 24872185
4

Molecular characterization of a begomovirus associated with yellow mosaic disease of Acalypha indica.

Kumar S, et al.  Virusdisease. 2025 Jun;36(2):343-352. doi: 10.1007/s13337-025-00919-9. Epub 2025 May 8.

PMID: 41018216