Genus | Begomovirus |
---|---|
NCBI Assembly | GCF_003028955.1 |
Isolate | India: Katerniaghat Wildlife Sanctuary, Bahraich, UP |
Release date | 2018/8/26 |
Submitter | Srivastava,A., Kumar,S., Jaidi,M., Raj,S.K., Snehi,S.K. |
Host | |
Vector | |
Download | Genome |GFF3 |PEP |CDS |
NCBI Accession | YP_009508284.1 |
---|---|
Location | 135-491 |
Gene Name | AV2 |
Protein Name | pre-coat protein |
Coding Region | ATGTGGGATCCACTACTTAAGAAATTCGCAGACTCCGTTCACGGTTTCCGTTGTATGCTAGCGCTGAAGTACCTTCAGCTCGTAGAAAGTACTTATTCCCCTGATACGCTCGGGTACGATCTAATCCGGGACCTGATTTCGGTTATCAGGGCCAGAAGCTATGCCGAAGCGACCAGCAGATATCATCATTTCAACTCCAGGCTCGAAAGTACGTCGCCGTCTGAACTTCGACAGCCCGTACAGCAACCGTGCAGCTGTCCCCACTGTCCGCGTCACAAAAAGGCAGGCCTGGTCGAACAGGCCCATGAACCGCAAGCCCAGGTTTTACAGGATGTACAGGAGTCCGGATGTGCCTAG |
Protein Sequence | MWDPLLKKFADSVHGFRCMLALKYLQLVESTYSPDTLGYDLIRDLISVIRARSYAEATSRYHHFNSRLESTSPSELRQPVQQPCSCPHCPRHKKAGLVEQAHEPQAQVLQDVQESGCA |
NCBI Accession | YP_009508285.1 |
---|---|
Location | 295-1065 |
Gene Name | AV1 |
Protein Name | coat protein |
Coding Region | ATGCCGAAGCGACCAGCAGATATCATCATTTCAACTCCAGGCTCGAAAGTACGTCGCCGTCTGAACTTCGACAGCCCGTACAGCAACCGTGCAGCTGTCCCCACTGTCCGCGTCACAAAAAGGCAGGCCTGGTCGAACAGGCCCATGAACCGCAAGCCCAGGTTTTACAGGATGTACAGGAGTCCGGATGTGCCTAGAGGCTGTGAAGGCCCATGTAAGGTTCAGTCATTTGAGTCCAGGCACGATGTCGTGCATATAGGTAAGGTCATGTGCATCTCCGATGTCACTCGAGGTACCGGTCTTACTCATCGCGTGGGTAAGAGGTTTTGCGTCAAGTCAGTCTACATTCTGGGCAAGATTTGGATGGATGAGAACATAAAGACTAAGAATCACACCAATAGTGTGATGTTTTTCCTCGTCAGGGATCGTAGGCCTGTGGATAAGCCCCAGGACTTCGGGGAAGTCTTCAACATGTTCGATAATGAGCCCAGTACTGCAACTGTTAAAAACATGCATCGTGATCGCTACCAAGTGCTCAGGAAGTGGAGTGCTACGGTGACTGGTGGTCAGTACGCAAGCAAGGAGCAGGCTTTAGTTAGGCGTTTTTTTAGGGTCAATAATTATGTAATTTACAACCAGCAAGAGGCTGGCAAATATGAGAATCACGCTGAGAATGCGTTGATGCTCTACATGGCGTGTACTCACGCCTCCAACCCCGTGTATGCTACGCTCAAGATACGAATCTATTTTTATGACTCTGTATCAAATTAA |
Protein Sequence | MPKRPADIIISTPGSKVRRRLNFDSPYSNRAAVPTVRVTKRQAWSNRPMNRKPRFYRMYRSPDVPRGCEGPCKVQSFESRHDVVHIGKVMCISDVTRGTGLTHRVGKRFCVKSVYILGKIWMDENIKTKNHTNSVMFFLVRDRRPVDKPQDFGEVFNMFDNEPSTATVKNMHRDRYQVLRKWSATVTGGQYASKEQALVRRFFRVNNYVIYNQQEAGKYENHAENALMLYMACTHASNPVYATLKIRIYFYDSVSN |
NCBI Accession | YP_009508286.1 |
---|---|
Location | 1062-1466 |
Gene Name | AC3 |
Protein Name | replication enhancer protein |
Coding Region | ATGGAATCCCGCACAGGGGAACTCATCACTGCAGCTCAGGCGACAAGTGGCGTGTTTATCTGGGAAGTTCCAAATCCCCTCTATTTCAAGATCACAGACCACCACCGCCTGCCGTTCAACATGACCTGGGACATAAAAACCGTCCAGATTCGGTTCAACCACAACCTGAGGAGAGCGTTGGGACTACATCAGTGGTGGATGGATTCCAAGATCTGGACAACCCTACACCTTCAGGCTGGGCGTTTCTTGAGAGTATTTAGTTACCAAGTACTTAAATACCTGGATATGCTAGGGGTTATTTCCATAAATACCGTTGTAAATGCTGTAGAACATGTAATGTACAATGTATTAACAAAAACTGTCAGGATCGAGCAAGCCAGTATAATAAAAATTAATGTTTATTAA |
Protein Sequence | MESRTGELITAAQATSGVFIWEVPNPLYFKITDHHRLPFNMTWDIKTVQIRFNHNLRRALGLHQWWMDSKIWTTLHLQAGRFLRVFSYQVLKYLDMLGVISINTVVNAVEHVMYNVLTKTVRIEQASIIKINVY |
NCBI Accession | YP_009508287.1 |
---|---|
Location | 1207-1614 |
Gene Name | AC2 |
Protein Name | transcriptional activator protein |
Coding Region | ATGCGTCCTTCGTCACCATCGACCAGCCGCTCTACTCAGGTTCCAATCAAGATTAACCACAGGGCAGCTAAGAGTAGGGCCATCAGGCGCAAGAGGATAGACCTCAACTGCGGCTGCTCGTACTATCTCCACATCAACTGCCCCAACCATGGAATCCCGCACAGGGGAACTCATCACTGCAGCTCAGGCGACAAGTGGCGTGTTTATCTGGGAAGTTCCAAATCCCCTCTATTTCAAGATCACAGACCACCACCGCCTGCCGTTCAACATGACCTGGGACATAAAAACCGTCCAGATTCGGTTCAACCACAACCTGAGGAGAGCGTTGGGACTACATCAGTGGTGGATGGATTCCAAGATCTGGACAACCCTACACCTTCAGGCTGGGCGTTTCTTGAGAGTATTTAG |
Protein Sequence | MRPSSPSTSRSTQVPIKINHRAAKSRAIRRKRIDLNCGCSYYLHINCPNHGIPHRGTHHCSSGDKWRVYLGSSKSPLFQDHRPPPPAVQHDLGHKNRPDSVQPQPEESVGTTSVVDGFQDLDNPTPSGWAFLESI |
NCBI Accession | YP_009508288.1 |
---|---|
Location | 1559-2602 |
Gene Name | AC1 |
Protein Name | replication-associated protein |
Coding Region | ATGTCAACACCTAAGCGTTTTATTATAAACGCCAAGAATTATTTCCTCACTTATCCCAGATGCTCTCTCTCCAAAGAAGAGACGCTTTCCCAAATTAAAAACCTAGAAACACCTACAAACCCTAAATTCATTAAAATCTGCAGAGAACTTCATGAAAATGGGGAACCTCATCTGCATGTGCTCGTCCAGTACGAAGGCAAGTTCAAATGCCAGAATAAGAGATTCTTCGACCTGGTATCCCCGACCAGGTCAGCACATTTCCATCCAAACATTCAGGGAGCTAAATCCAGCTCCGACGTCAAGTCCTATATCGACAAGGACGGAGATACTCTGGAATGGGGAGAATTCCAGATCGATGGCAGGTCTGCACGGGGAGGTCAACAGTCGGCAAATGATGCATACGCCGCCGCAATTAACAGCGGCAGTAAGTCAGAGGCTCTTAAGATCCTTAGAGAGCTAGCTCCTAAAGACTACGTCCTGCAGTTTCATAATTTGAATGCGAATTTAGATAAAATTTTTAAAACACTTATTACGGTCTATGAGAGTCCTTTTGGTCTATCGACATTTGATCGAGTTCCAGAAGAACTCGATGTATGGTACCATGAAAATGTCCTGGTTGCCGCTGCGCGGCCTTTGAGACCGAAGTCAATCGTAATCGAGGGCGATAGTCGGACAGGTAAGACTATGTGGGCTCGTGCATTGGGTCCACATAATTACCTATGTGGACATCTGGACCTCAGTCCCAAAGTCTTTAGCAATGATGCCTGGTATAACGTCATTGATGACGTAGATCCGCACTATCTAAAGCACTTCAAAGAGTTCATGGGGGCCCAGAGAGACTGGCAAAGCAACACAAAGTACGGAAAGCCAGTTCAAATTAAAGGGGGAATACCCACTATCTTCCTCTGCAATCCTGGGCCCAATTCCAGCTATAAAGAGTTCCTAGATGAGCCGAAGAATACGGCACTAAGGGCTTGGGCATTAAAAAATGCGTCCTTCGTCACCATCGACCAGCCGCTCTACTCAGGTTCCAATCAAGATTAA |
Protein Sequence | MSTPKRFIINAKNYFLTYPRCSLSKEETLSQIKNLETPTNPKFIKICRELHENGEPHLHVLVQYEGKFKCQNKRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYIDKDGDTLEWGEFQIDGRSARGGQQSANDAYAAAINSGSKSEALKILRELAPKDYVLQFHNLNANLDKIFKTLITVYESPFGLSTFDRVPEELDVWYHENVLVAAARPLRPKSIVIEGDSRTGKTMWARALGPHNYLCGHLDLSPKVFSNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLDEPKNTALRAWALKNASFVTIDQPLYSGSNQD |
NCBI Accession | YP_009508289.1 |
---|---|
Location | 2143-2445 |
Gene Name | AC4 |
Protein Name | C4 protein |
Coding Region | ATGGGGAACCTCATCTGCATGTGCTCGTCCAGTACGAAGGCAAGTTCAAATGCCAGAATAAGAGATTCTTCGACCTGGTATCCCCGACCAGGTCAGCACATTTCCATCCAAACATTCAGGGAGCTAAATCCAGCTCCGACGTCAAGTCCTATATCGACAAGGACGGAGATACTCTGGAATGGGGAGAATTCCAGATCGATGGCAGGTCTGCACGGGGAGGTCAACAGTCGGCAAATGATGCATACGCCGCCGCAATTAACAGCGGCAGTAAGTCAGAGGCTCTTAAGATCCTTAGAGAGCTAG |
Protein Sequence | MGNLICMCSSSTKASSNARIRDSSTWYPRPGQHISIQTFRELNPAPTSSPISTRTEILWNGENSRSMAGLHGEVNSRQMMHTPPQLTAAVSQRLLRSLES |
1 |
Gireeshbai S, et al. Lett Appl Microbiol. 2022 Oct;75(4):1000-1009. doi: 10.1111/lam.13774. Epub 2022 Jul 2. PMID: 35723883 |
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2 |
Srivastava A, et al. Arch Virol. 2015 May;160(5):1359-62. doi: 10.1007/s00705-015-2375-5. Epub 2015 Feb 27. PMID: 25716923 |
3 |
Snehi SK, et al. Virus Genes. 2011 Aug;43(1):93-101. doi: 10.1007/s11262-011-0605-9. Epub 2011 Apr 9. PMID: 21479677 |
4 |
First Report of Cucumber mosaic virus on Jatropha curcas in India. Raj SK, et al. Plant Dis. 2008 Jan;92(1):171. doi: 10.1094/PDIS-92-1-0171C. PMID: 30786384 |
5 |
Snehi SK, et al. Arch Virol. 2011 Dec;156(12):2303-7. doi: 10.1007/s00705-011-1118-5. Epub 2011 Oct 5. PMID: 21971870 |
6 |
Srivastava A, et al. Virus Res. 2015 Apr 2;201:41-9. doi: 10.1016/j.virusres.2015.02.015. Epub 2015 Feb 23. PMID: 25720372 |
7 |
Chauhan S, et al. Gene. 2018 Jul 20;664:37-43. doi: 10.1016/j.gene.2018.04.062. Epub 2018 Apr 22. PMID: 29684487 |
8 |
Mgbechi-Ezeri JU, et al. Plant Dis. 2008 Dec;92(12):1709. doi: 10.1094/PDIS-92-12-1709B. PMID: 30764308 |
9 |
Domínguez M, et al. Plant Dis. 2002 Sep;86(9):1050. doi: 10.1094/PDIS.2002.86.9.1050A. PMID: 30818540 |
10 |
Simmonds-Gordon RN, et al. Arch Virol. 2014 Oct;159(10):2815-8. doi: 10.1007/s00705-014-2112-5. Epub 2014 May 29. PMID: 24872185 |