Jatropha leaf yellow mosaic virus

Basic Information

Genus Begomovirus
NCBI Assembly GCF_003028955.1
Isolate India: Katerniaghat Wildlife Sanctuary, Bahraich, UP
Release date 2018/8/26
Submitter Srivastava,A., Kumar,S., Jaidi,M., Raj,S.K., Snehi,S.K.
Host
Vector
Download Genome |GFF3 |PEP |CDS

Genomic Organization

JBrowse

Genome

NC_038956
ACCGGATGGCCGCGCTCCCTGCTTTGTGGTTCCCCCCCCCCACGTGGAGTTGTCGCCCACTCAGAACGCTGCGTCAAGCTTCAATATTTGTGGTCCCTGTTTAAGTACTTCGTAAGCAAGTTGCTACTTGCAAAATGTGGGATCCACTACTTAAGAAATTCGCAGACTCCGTTCACGGTTTCCGTTGTATGCTAGCGCTGAAGTACCTTCAGCTCGTAGAAAGTACTTATTCCCCTGATACGCTCGGGTACGATCTAATCCGGGACCTGATTTCGGTTATCAGGGCCAGAAGCTATGCCGAAGCGACCAGCAGATATCATCATTTCAACTCCAGGCTCGAAAGTACGTCGCCGTCTGAACTTCGACAGCCCGTACAGCAACCGTGCAGCTGTCCCCACTGTCCGCGTCACAAAAAGGCAGGCCTGGTCGAACAGGCCCATGAACCGCAAGCCCAGGTTTTACAGGATGTACAGGAGTCCGGATGTGCCTAGAGGCTGTGAAGGCCCATGTAAGGTTCAGTCATTTGAGTCCAGGCACGATGTCGTGCATATAGGTAAGGTCATGTGCATCTCCGATGTCACTCGAGGTACCGGTCTTACTCATCGCGTGGGTAAGAGGTTTTGCGTCAAGTCAGTCTACATTCTGGGCAAGATTTGGATGGATGAGAACATAAAGACTAAGAATCACACCAATAGTGTGATGTTTTTCCTCGTCAGGGATCGTAGGCCTGTGGATAAGCCCCAGGACTTCGGGGAAGTCTTCAACATGTTCGATAATGAGCCCAGTACTGCAACTGTTAAAAACATGCATCGTGATCGCTACCAAGTGCTCAGGAAGTGGAGTGCTACGGTGACTGGTGGTCAGTACGCAAGCAAGGAGCAGGCTTTAGTTAGGCGTTTTTTTAGGGTCAATAATTATGTAATTTACAACCAGCAAGAGGCTGGCAAATATGAGAATCACGCTGAGAATGCGTTGATGCTCTACATGGCGTGTACTCACGCCTCCAACCCCGTGTATGCTACGCTCAAGATACGAATCTATTTTTATGACTCTGTATCAAATTAATAAACATTAATTTTTATTATACTGGCTTGCTCGATCCTGACAGTTTTTGTTAATACATTGTACATTACATGTTCTACAGCATTTACAACGGTATTTATGGAAATAACCCCTAGCATATCCAGGTATTTAAGTACTTGGTAACTAAATACTCTCAAGAAACGCCCAGCCTGAAGGTGTAGGGTTGTCCAGATCTTGGAATCCATCCACCACTGATGTAGTCCCAACGCTCTCCTCAGGTTGTGGTTGAACCGAATCTGGACGGTTTTTATGTCCCAGGTCATGTTGAACGGCAGGCGGTGGTGGTCTGTGATCTTGAAATAGAGGGGATTTGGAACTTCCCAGATAAACACGCCACTTGTCGCCTGAGCTGCAGTGATGAGTTCCCCTGTGCGGGATTCCATGGTTGGGGCAGTTGATGTGGAGATAGTACGAGCAGCCGCAGTTGAGGTCTATCCTCTTGCGCCTGATGGCCCTACTCTTAGCTGCCCTGTGGTTAATCTTGATTGGAACCTGAGTAGAGCGGCTGGTCGATGGTGACGAAGGACGCATTTTTTAATGCCCAAGCCCTTAGTGCCGTATTCTTCGGCTCATCTAGGAACTCTTTATAGCTGGAATTGGGCCCAGGATTGCAGAGGAAGATAGTGGGTATTCCCCCTTTAATTTGAACTGGCTTTCCGTACTTTGTGTTGCTTTGCCAGTCTCTCTGGGCCCCCATGAACTCTTTGAAGTGCTTTAGATAGTGCGGATCTACGTCATCAATGACGTTATACCAGGCATCATTGCTAAAGACTTTGGGACTGAGGTCCAGATGTCCACATAGGTAATTATGTGGACCCAATGCACGAGCCCACATAGTCTTACCTGTCCGACTATCGCCCTCGATTACGATTGACTTCGGTCTCAAAGGCCGCGCAGCGGCAACCAGGACATTTTCATGGTACCATACATCGAGTTCTTCTGGAACTCGATCAAATGTCGATAGACCAAAAGGACTCTCATAGACCGTAATAAGTGTTTTAAAAATTTTATCTAAATTCGCATTCAAATTATGAAACTGCAGGACGTAGTCTTTAGGAGCTAGCTCTCTAAGGATCTTAAGAGCCTCTGACTTACTGCCGCTGTTAATTGCGGCGGCGTATGCATCATTTGCCGACTGTTGACCTCCCCGTGCAGACCTGCCATCGATCTGGAATTCTCCCCATTCCAGAGTATCTCCGTCCTTGTCGATATAGGACTTGACGTCGGAGCTGGATTTAGCTCCCTGAATGTTTGGATGGAAATGTGCTGACCTGGTCGGGGATACCAGGTCGAAGAATCTCTTATTCTGGCATTTGAACTTGCCTTCGTACTGGACGAGCACATGCAGATGAGGTTCCCCATTTTCATGAAGTTCTCTGCAGATTTTAATGAATTTAGGGTTTGTAGGTGTTTCTAGGTTTTTAATTTGGGAAAGCGTCTCTTCTTTGGAGAGAGAGCATCTGGGATAAGTGAGGAAATAATTCTTGGCGTTTATAATAAAACGCTTAGGTGTTGACATGAGACCCGATTGACCGCTATTCAATCATTTATCCCCTATATTCGGGTCTCTATATATACATGAGACCCAAATGGCATAAATGGTAATTATGGGAATATAATTTGAATTTGAAAGCGGCCATCCGTATAATATTTATAATATT

Gene Information

NCBI Accession YP_009508284.1
Location 135-491
Gene Name AV2
Protein Name pre-coat protein
Coding Region ATGTGGGATCCACTACTTAAGAAATTCGCAGACTCCGTTCACGGTTTCCGTTGTATGCTAGCGCTGAAGTACCTTCAGCTCGTAGAAAGTACTTATTCCCCTGATACGCTCGGGTACGATCTAATCCGGGACCTGATTTCGGTTATCAGGGCCAGAAGCTATGCCGAAGCGACCAGCAGATATCATCATTTCAACTCCAGGCTCGAAAGTACGTCGCCGTCTGAACTTCGACAGCCCGTACAGCAACCGTGCAGCTGTCCCCACTGTCCGCGTCACAAAAAGGCAGGCCTGGTCGAACAGGCCCATGAACCGCAAGCCCAGGTTTTACAGGATGTACAGGAGTCCGGATGTGCCTAG
Protein Sequence MWDPLLKKFADSVHGFRCMLALKYLQLVESTYSPDTLGYDLIRDLISVIRARSYAEATSRYHHFNSRLESTSPSELRQPVQQPCSCPHCPRHKKAGLVEQAHEPQAQVLQDVQESGCA

NCBI Accession YP_009508285.1
Location 295-1065
Gene Name AV1
Protein Name coat protein
Coding Region ATGCCGAAGCGACCAGCAGATATCATCATTTCAACTCCAGGCTCGAAAGTACGTCGCCGTCTGAACTTCGACAGCCCGTACAGCAACCGTGCAGCTGTCCCCACTGTCCGCGTCACAAAAAGGCAGGCCTGGTCGAACAGGCCCATGAACCGCAAGCCCAGGTTTTACAGGATGTACAGGAGTCCGGATGTGCCTAGAGGCTGTGAAGGCCCATGTAAGGTTCAGTCATTTGAGTCCAGGCACGATGTCGTGCATATAGGTAAGGTCATGTGCATCTCCGATGTCACTCGAGGTACCGGTCTTACTCATCGCGTGGGTAAGAGGTTTTGCGTCAAGTCAGTCTACATTCTGGGCAAGATTTGGATGGATGAGAACATAAAGACTAAGAATCACACCAATAGTGTGATGTTTTTCCTCGTCAGGGATCGTAGGCCTGTGGATAAGCCCCAGGACTTCGGGGAAGTCTTCAACATGTTCGATAATGAGCCCAGTACTGCAACTGTTAAAAACATGCATCGTGATCGCTACCAAGTGCTCAGGAAGTGGAGTGCTACGGTGACTGGTGGTCAGTACGCAAGCAAGGAGCAGGCTTTAGTTAGGCGTTTTTTTAGGGTCAATAATTATGTAATTTACAACCAGCAAGAGGCTGGCAAATATGAGAATCACGCTGAGAATGCGTTGATGCTCTACATGGCGTGTACTCACGCCTCCAACCCCGTGTATGCTACGCTCAAGATACGAATCTATTTTTATGACTCTGTATCAAATTAA
Protein Sequence MPKRPADIIISTPGSKVRRRLNFDSPYSNRAAVPTVRVTKRQAWSNRPMNRKPRFYRMYRSPDVPRGCEGPCKVQSFESRHDVVHIGKVMCISDVTRGTGLTHRVGKRFCVKSVYILGKIWMDENIKTKNHTNSVMFFLVRDRRPVDKPQDFGEVFNMFDNEPSTATVKNMHRDRYQVLRKWSATVTGGQYASKEQALVRRFFRVNNYVIYNQQEAGKYENHAENALMLYMACTHASNPVYATLKIRIYFYDSVSN

NCBI Accession YP_009508286.1
Location 1062-1466
Gene Name AC3
Protein Name replication enhancer protein
Coding Region ATGGAATCCCGCACAGGGGAACTCATCACTGCAGCTCAGGCGACAAGTGGCGTGTTTATCTGGGAAGTTCCAAATCCCCTCTATTTCAAGATCACAGACCACCACCGCCTGCCGTTCAACATGACCTGGGACATAAAAACCGTCCAGATTCGGTTCAACCACAACCTGAGGAGAGCGTTGGGACTACATCAGTGGTGGATGGATTCCAAGATCTGGACAACCCTACACCTTCAGGCTGGGCGTTTCTTGAGAGTATTTAGTTACCAAGTACTTAAATACCTGGATATGCTAGGGGTTATTTCCATAAATACCGTTGTAAATGCTGTAGAACATGTAATGTACAATGTATTAACAAAAACTGTCAGGATCGAGCAAGCCAGTATAATAAAAATTAATGTTTATTAA
Protein Sequence MESRTGELITAAQATSGVFIWEVPNPLYFKITDHHRLPFNMTWDIKTVQIRFNHNLRRALGLHQWWMDSKIWTTLHLQAGRFLRVFSYQVLKYLDMLGVISINTVVNAVEHVMYNVLTKTVRIEQASIIKINVY

NCBI Accession YP_009508287.1
Location 1207-1614
Gene Name AC2
Protein Name transcriptional activator protein
Coding Region ATGCGTCCTTCGTCACCATCGACCAGCCGCTCTACTCAGGTTCCAATCAAGATTAACCACAGGGCAGCTAAGAGTAGGGCCATCAGGCGCAAGAGGATAGACCTCAACTGCGGCTGCTCGTACTATCTCCACATCAACTGCCCCAACCATGGAATCCCGCACAGGGGAACTCATCACTGCAGCTCAGGCGACAAGTGGCGTGTTTATCTGGGAAGTTCCAAATCCCCTCTATTTCAAGATCACAGACCACCACCGCCTGCCGTTCAACATGACCTGGGACATAAAAACCGTCCAGATTCGGTTCAACCACAACCTGAGGAGAGCGTTGGGACTACATCAGTGGTGGATGGATTCCAAGATCTGGACAACCCTACACCTTCAGGCTGGGCGTTTCTTGAGAGTATTTAG
Protein Sequence MRPSSPSTSRSTQVPIKINHRAAKSRAIRRKRIDLNCGCSYYLHINCPNHGIPHRGTHHCSSGDKWRVYLGSSKSPLFQDHRPPPPAVQHDLGHKNRPDSVQPQPEESVGTTSVVDGFQDLDNPTPSGWAFLESI

NCBI Accession YP_009508288.1
Location 1559-2602
Gene Name AC1
Protein Name replication-associated protein
Coding Region ATGTCAACACCTAAGCGTTTTATTATAAACGCCAAGAATTATTTCCTCACTTATCCCAGATGCTCTCTCTCCAAAGAAGAGACGCTTTCCCAAATTAAAAACCTAGAAACACCTACAAACCCTAAATTCATTAAAATCTGCAGAGAACTTCATGAAAATGGGGAACCTCATCTGCATGTGCTCGTCCAGTACGAAGGCAAGTTCAAATGCCAGAATAAGAGATTCTTCGACCTGGTATCCCCGACCAGGTCAGCACATTTCCATCCAAACATTCAGGGAGCTAAATCCAGCTCCGACGTCAAGTCCTATATCGACAAGGACGGAGATACTCTGGAATGGGGAGAATTCCAGATCGATGGCAGGTCTGCACGGGGAGGTCAACAGTCGGCAAATGATGCATACGCCGCCGCAATTAACAGCGGCAGTAAGTCAGAGGCTCTTAAGATCCTTAGAGAGCTAGCTCCTAAAGACTACGTCCTGCAGTTTCATAATTTGAATGCGAATTTAGATAAAATTTTTAAAACACTTATTACGGTCTATGAGAGTCCTTTTGGTCTATCGACATTTGATCGAGTTCCAGAAGAACTCGATGTATGGTACCATGAAAATGTCCTGGTTGCCGCTGCGCGGCCTTTGAGACCGAAGTCAATCGTAATCGAGGGCGATAGTCGGACAGGTAAGACTATGTGGGCTCGTGCATTGGGTCCACATAATTACCTATGTGGACATCTGGACCTCAGTCCCAAAGTCTTTAGCAATGATGCCTGGTATAACGTCATTGATGACGTAGATCCGCACTATCTAAAGCACTTCAAAGAGTTCATGGGGGCCCAGAGAGACTGGCAAAGCAACACAAAGTACGGAAAGCCAGTTCAAATTAAAGGGGGAATACCCACTATCTTCCTCTGCAATCCTGGGCCCAATTCCAGCTATAAAGAGTTCCTAGATGAGCCGAAGAATACGGCACTAAGGGCTTGGGCATTAAAAAATGCGTCCTTCGTCACCATCGACCAGCCGCTCTACTCAGGTTCCAATCAAGATTAA
Protein Sequence MSTPKRFIINAKNYFLTYPRCSLSKEETLSQIKNLETPTNPKFIKICRELHENGEPHLHVLVQYEGKFKCQNKRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYIDKDGDTLEWGEFQIDGRSARGGQQSANDAYAAAINSGSKSEALKILRELAPKDYVLQFHNLNANLDKIFKTLITVYESPFGLSTFDRVPEELDVWYHENVLVAAARPLRPKSIVIEGDSRTGKTMWARALGPHNYLCGHLDLSPKVFSNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLDEPKNTALRAWALKNASFVTIDQPLYSGSNQD

NCBI Accession YP_009508289.1
Location 2143-2445
Gene Name AC4
Protein Name C4 protein
Coding Region ATGGGGAACCTCATCTGCATGTGCTCGTCCAGTACGAAGGCAAGTTCAAATGCCAGAATAAGAGATTCTTCGACCTGGTATCCCCGACCAGGTCAGCACATTTCCATCCAAACATTCAGGGAGCTAAATCCAGCTCCGACGTCAAGTCCTATATCGACAAGGACGGAGATACTCTGGAATGGGGAGAATTCCAGATCGATGGCAGGTCTGCACGGGGAGGTCAACAGTCGGCAAATGATGCATACGCCGCCGCAATTAACAGCGGCAGTAAGTCAGAGGCTCTTAAGATCCTTAGAGAGCTAG
Protein Sequence MGNLICMCSSSTKASSNARIRDSSTWYPRPGQHISIQTFRELNPAPTSSPISTRTEILWNGENSRSMAGLHGEVNSRQMMHTPPQLTAAVSQRLLRSLES

References More References in PubMed

1

Mixed infection of a new begomovirus, Jatropha leaf curl Guntur virus and recombinant/chimeric jatropha leaf curl Gujarat virus in Jatropha gossypiifolia.

Gireeshbai S, et al.  Lett Appl Microbiol. 2022 Oct;75(4):1000-1009. doi: 10.1111/lam.13774. Epub 2022 Jul 2.

PMID: 35723883
2

Molecular characterization of a new begomovirus associated with leaf yellow mosaic disease of Jatropha curcas in India.

Srivastava A, et al.  Arch Virol. 2015 May;160(5):1359-62. doi: 10.1007/s00705-015-2375-5. Epub 2015 Feb 27.

PMID: 25716923
3

Complete nucleotide sequence of Croton yellow vein mosaic virus and DNA-β associated with yellow vein mosaic disease of Jatropha gossypifolia in India.

Snehi SK, et al.  Virus Genes. 2011 Aug;43(1):93-101. doi: 10.1007/s11262-011-0605-9. Epub 2011 Apr 9.

PMID: 21479677
4

First Report of Cucumber mosaic virus on Jatropha curcas in India.

Raj SK, et al.  Plant Dis. 2008 Jan;92(1):171. doi: 10.1094/PDIS-92-1-0171C.

PMID: 30786384
5

Molecular identification of a new begomovirus associated with yellow mosaic disease of Jatropha gossypifolia in India.

Snehi SK, et al.  Arch Virol. 2011 Dec;156(12):2303-7. doi: 10.1007/s00705-011-1118-5. Epub 2011 Oct 5.

PMID: 21971870
6

Characterization of a novel begomovirus associated with yellow mosaic disease of three ornamental species of Jatropha grown in India.

Srivastava A, et al.  Virus Res. 2015 Apr 2;201:41-9. doi: 10.1016/j.virusres.2015.02.015. Epub 2015 Feb 23.

PMID: 25720372
7

Isolation and sequence characterization of DNA-A genome of a new begomovirus strain associated with severe leaf curling symptoms of Jatropha curcas L.

Chauhan S, et al.  Gene. 2018 Jul 20;664:37-43. doi: 10.1016/j.gene.2018.04.062. Epub 2018 Apr 22.

PMID: 29684487
8

First Report of the Occurrence of African cassava mosaic virus in a Mosaic Disease of Soybean in Nigeria.

Mgbechi-Ezeri JU, et al.  Plant Dis. 2008 Dec;92(12):1709. doi: 10.1094/PDIS-92-12-1709B.

PMID: 30764308
9

Molecular Characterization of Tobacco leaf rugose virus, a New Begomovirus Infecting Tobacco in Cuba.

Domínguez M, et al.  Plant Dis. 2002 Sep;86(9):1050. doi: 10.1094/PDIS.2002.86.9.1050A.

PMID: 30818540
10

First report of a complete genome sequence for a begomovirus infecting Jatropha gossypifolia in the Americas.

Simmonds-Gordon RN, et al.  Arch Virol. 2014 Oct;159(10):2815-8. doi: 10.1007/s00705-014-2112-5. Epub 2014 May 29.

PMID: 24872185