Jatropha leaf curl virus

Basic Information

Genus Begomovirus
NCBI Assembly GCF_000880535.1
Isolate India
Release date 2015/2/22
Submitter Pal,A., Mukherjee,S.
Host
Vector
Download Genome |GFF3 |PEP |CDS

Genomic Organization

JBrowse

Genome

NC_011268
ACCGGATGGCCGCGATTTTTTTTAACGTGGACCCCACAACTGACAAACAGACAAAGAAAAGAAAAGGGAACCCAGCACAAAGAGAAAAAAACTAACGTCCCGCGCGCTATAAAACTTGCTGGCGAAGGAGTAGAGCCGCAACATGTGGGATCCATTAACCAACGAGTTTCCCGAAACCCTGCACGGGTTTCGCTGTATGCTTGCAGTCAAATATCTACAAGCTCTACTCTCTTCGTACGCTCCTGATACGGTCGGATACGAGTACCTTCGTGATCTGATCAGCGTACTACGCTGTCGCGACTATGGCAAAGCGTCTATTCGATATGGTCGGATCGTCGCCGCTAAGAATAACACGCCGGAAACTGAACTTCGGGAGTCCCTCCCGTCTCATTGCCAGTGCCGTCACTGCCCCAGACATGGGATTCAAAAGGAGGGCGTGGACGTGGCGACCAGCAAACCGAAAACCGTGGATATACCGGAGAAGGAGAGCTCCTGATGTGCCGCGTGGATGCGAGGGACCATGCAAAGTACAGTCATTCGAAAAGAGACATGATGTCACGCACACGGGGGGCGTTCTATGTATATCTGACGTCACACGCGGCAATGGTATCACGCATAGAGTGGGTAAGAGATTCTGCGTGAAATCCGTCTATGTACTTGGCAAGATTTGGATGGACGAGAACATCAAGACGAAGAACCATACTAACAGCGTGATATTCTGGCTGGTCAGAGACAGGCGTCCATTTGGCAGTCCAATGGACCTGGGCCAAGTCTTTAACATGTATGATAACGAGCCCAGTACAGCCACTATCAAGAACGATTTGAGGGATAGATATCAAGTGTTACACAAATGGCACGCGTCGGTTACTGGTGGTGTCTATGCGTCTAAGGAACAAGCTATAATCAAGAAGTTCTACAGAGTCAATAATTATGTGGTCTACAATCACCAGGAAGCCGCGAAATACGAAAACCATACTGAGAATGCGTTATTATTGTACATGGCATGTACGCATGCATCAAATCCAGTGTATGCAACATTGAAAATACGCATATATTTCTACGACTCAGTATCAAATTAATTAAACATTATTTCATTGCTCTGTTCAACCTGCATCGTATGATGCAGTACATTATACAATACATGATCTACAGCTTTAATTACAAGATTAATAGAAATTACACCTAATCTATCTAAATATCTAATAACTTGAGTCTTAAAGACTCGTAAGAACATCCCAGTCTGAATCCGTGAACGAGTCCAGACTTTGAAGCTCAGGAAGCACTTGTGTATCTGTAGTGCTTGCCTGAGATTGTGATTGAATTGTATTCGGAGGTGTATGATGTCCTGGTCCAGGTTGAAGGGTCTGCTCATGTGACTGATGACGCGGAAGTACAGAGGATTTGGGACCGTCCAGATAAAGACGCCATTGTTGAAACGAGCTGCAGTGATGGGTTCCCCTGTGCGTGAATCCATGATTCGCGCAGTTAGCGAGAGAAAATATGAACATCCGCACTTCAAGTCGATCCTCCTCCGCCTTATCCCCCCCTGATCTGTCGCCTCTGGCGTCTCTTGAAAGGAGCTGGAGGGGGACTGTCGCTGTCGAACACGACATTCTTAACAGCCCAGTTCTTTAATGCTGCGTTCCTATCTTCGTCTAAATACTCTTTATAGCTCGAATGGGGCCCAGGATTGCAGAGGAAGATTGTCGGAATGCCTCCTTTAACTTGAACGGGCTTTCCATACTTTGTGTTGCTTTGCCAGTCTCTCTGGGCCCCCATAAATTCCTTGAAGTGCTTGAGATAATGCGGATCAACATCATCAATGACGTTATACCATACGTCATTACTATAGACTCTTGGACTGAGATCCAAGTGACCGCATAAATAATTGTGTGGGCCGAGAGACCGAGCCCACATTGTCTTCCCAATACGACTATCACCCTCTAAAACAATACTTATGGGTCTAAAAGGCCGCGCAGCGGGACTGACAATATTTTCTGAGGCCCAAATCTCGAGTTCTTCTGGAACTCGATCAAACGAACAAAGAGGATAAGGAGAAACATAATCTACTCTAAGAGGTGTAAATATCTCCCTCTCTAGATTGGACTTTAAATTATGATACTGAAAAATATAATCTCTGGGCATCTTCACGGATATAGCTAGAGCAGCTTCTGCAGACCCAGAGTTTAAGGCCTCCGCTGCAGCATCATTAGCTGTCTGTTGACCTCCTCTAGCAGATCTTCCATCGATCTGAAAGAACCCCCAGTCGATGAAATCTCCGTCCTTCTCGATATAGGACTTAACATCAGAGGAGGACTTAGCTCCCTGGATATTTGGATGGAATTGGGAGGAGCTATGAGGATGGATGAGATCGAAATGTCTTGCATTTCTGAATCTGGCCTTACCCTTGAACTGGATAAGGGCATGGATATGCAGTGACCCATCCTCGTGTTTCTCCTGCGCGACTCTAATAAATAATTTATCAGAAGGACAGGATATGTTTCGCAGGAGATCCAAGACTGTCTCCTTGGATAATGGGCATTTGGGATAAGTGAGGAATATGTTTTTAGCGCTAACTGAAAATGCGTTAACACGAGGCATTTTAAACAGAGGGTATTGGGGACGCTGTAAAACTCTCTACAATTGGGGACTTGGGGGACGCATTTATACCAGTGTCCCCAAATGGCACGCTTGTAATTTTTGTGAAAATCCCCTGTCCAACAGCGGCCATCCGATTAATATT

Gene Information

NCBI Accession YP_002224028.1
Location 143-496
Protein Name precoat protein
Coding Region ATGTGGGATCCATTAACCAACGAGTTTCCCGAAACCCTGCACGGGTTTCGCTGTATGCTTGCAGTCAAATATCTACAAGCTCTACTCTCTTCGTACGCTCCTGATACGGTCGGATACGAGTACCTTCGTGATCTGATCAGCGTACTACGCTGTCGCGACTATGGCAAAGCGTCTATTCGATATGGTCGGATCGTCGCCGCTAAGAATAACACGCCGGAAACTGAACTTCGGGAGTCCCTCCCGTCTCATTGCCAGTGCCGTCACTGCCCCAGACATGGGATTCAAAAGGAGGGCGTGGACGTGGCGACCAGCAAACCGAAAACCGTGGATATACCGGAGAAGGAGAGCTCCTGA
Protein Sequence MWDPLTNEFPETLHGFRCMLAVKYLQALLSSYAPDTVGYEYLRDLISVLRCRDYGKASIRYGRIVAAKNNTPETELRESLPSHCQCRHCPRHGIQKEGVDVATSKPKTVDIPEKESS

NCBI Accession YP_002224029.1
Location 303-1079
Protein Name coat protein
Coding Region ATGGCAAAGCGTCTATTCGATATGGTCGGATCGTCGCCGCTAAGAATAACACGCCGGAAACTGAACTTCGGGAGTCCCTCCCGTCTCATTGCCAGTGCCGTCACTGCCCCAGACATGGGATTCAAAAGGAGGGCGTGGACGTGGCGACCAGCAAACCGAAAACCGTGGATATACCGGAGAAGGAGAGCTCCTGATGTGCCGCGTGGATGCGAGGGACCATGCAAAGTACAGTCATTCGAAAAGAGACATGATGTCACGCACACGGGGGGCGTTCTATGTATATCTGACGTCACACGCGGCAATGGTATCACGCATAGAGTGGGTAAGAGATTCTGCGTGAAATCCGTCTATGTACTTGGCAAGATTTGGATGGACGAGAACATCAAGACGAAGAACCATACTAACAGCGTGATATTCTGGCTGGTCAGAGACAGGCGTCCATTTGGCAGTCCAATGGACCTGGGCCAAGTCTTTAACATGTATGATAACGAGCCCAGTACAGCCACTATCAAGAACGATTTGAGGGATAGATATCAAGTGTTACACAAATGGCACGCGTCGGTTACTGGTGGTGTCTATGCGTCTAAGGAACAAGCTATAATCAAGAAGTTCTACAGAGTCAATAATTATGTGGTCTACAATCACCAGGAAGCCGCGAAATACGAAAACCATACTGAGAATGCGTTATTATTGTACATGGCATGTACGCATGCATCAAATCCAGTGTATGCAACATTGAAAATACGCATATATTTCTACGACTCAGTATCAAATTAA
Protein Sequence MAKRLFDMVGSSPLRITRRKLNFGSPSRLIASAVTAPDMGFKRRAWTWRPANRKPWIYRRRRAPDVPRGCEGPCKVQSFEKRHDVTHTGGVLCISDVTRGNGITHRVGKRFCVKSVYVLGKIWMDENIKTKNHTNSVIFWLVRDRRPFGSPMDLGQVFNMYDNEPSTATIKNDLRDRYQVLHKWHASVTGGVYASKEQAIIKKFYRVNNYVVYNHQEAAKYENHTENALLLYMACTHASNPVYATLKIRIYFYDSVSN

NCBI Accession YP_002224030.1
Location 1076-1474
Protein Name AC3
Coding Region ATGGATTCACGCACAGGGGAACCCATCACTGCAGCTCGTTTCAACAATGGCGTCTTTATCTGGACGGTCCCAAATCCTCTGTACTTCCGCGTCATCAGTCACATGAGCAGACCCTTCAACCTGGACCAGGACATCATACACCTCCGAATACAATTCAATCACAATCTCAGGCAAGCACTACAGATACACAAGTGCTTCCTGAGCTTCAAAGTCTGGACTCGTTCACGGATTCAGACTGGGATGTTCTTACGAGTCTTTAAGACTCAAGTTATTAGATATTTAGATAGATTAGGTGTAATTTCTATTAATCTTGTAATTAAAGCTGTAGATCATGTATTGTATAATGTACTGCATCATACGATGCAGGTTGAACAGAGCAATGAAATAATGTTTAATTAA
Protein Sequence MDSRTGEPITAARFNNGVFIWTVPNPLYFRVISHMSRPFNLDQDIIHLRIQFNHNLRQALQIHKCFLSFKVWTRSRIQTGMFLRVFKTQVIRYLDRLGVISINLVIKAVDHVLYNVLHHTMQVEQSNEIMFN

NCBI Accession YP_002224031.1
Location 1215-1613
Protein Name AC2
Coding Region ATGTCGTGTTCGACAGCGACAGTCCCCCTCCAGCTCCTTTCAAGAGACGCCAGAGGCGACAGATCAGGGGGGGATAAGGCGGAGGAGGATCGACTTGAAGTGCGGATGTTCATATTTTCTCTCGCTAACTGCGCGAATCATGGATTCACGCACAGGGGAACCCATCACTGCAGCTCGTTTCAACAATGGCGTCTTTATCTGGACGGTCCCAAATCCTCTGTACTTCCGCGTCATCAGTCACATGAGCAGACCCTTCAACCTGGACCAGGACATCATACACCTCCGAATACAATTCAATCACAATCTCAGGCAAGCACTACAGATACACAAGTGCTTCCTGAGCTTCAAAGTCTGGACTCGTTCACGGATTCAGACTGGGATGTTCTTACGAGTCTTTAA
Protein Sequence MSCSTATVPLQLLSRDARGDRSGGDKAEEDRLEVRMFIFSLANCANHGFTHRGTHHCSSFQQWRLYLDGPKSSVLPRHQSHEQTLQPGPGHHTPPNTIQSQSQASTTDTQVLPELQSLDSFTDSDWDVLTSL

NCBI Accession YP_002224032.1
Location 1537-2601
Protein Name AC1
Coding Region ATGCCTCGTGTTAACGCATTTTCAGTTAGCGCTAAAAACATATTCCTCACTTATCCCAAATGCCCATTATCCAAGGAGACAGTCTTGGATCTCCTGCGAAACATATCCTGTCCTTCTGATAAATTATTTATTAGAGTCGCGCAGGAGAAACACGAGGATGGGTCACTGCATATCCATGCCCTTATCCAGTTCAAGGGTAAGGCCAGATTCAGAAATGCAAGACATTTCGATCTCATCCATCCTCATAGCTCCTCCCAATTCCATCCAAATATCCAGGGAGCTAAGTCCTCCTCTGATGTTAAGTCCTATATCGAGAAGGACGGAGATTTCATCGACTGGGGGTTCTTTCAGATCGATGGAAGATCTGCTAGAGGAGGTCAACAGACAGCTAATGATGCTGCAGCGGAGGCCTTAAACTCTGGGTCTGCAGAAGCTGCTCTAGCTATATCCGTGAAGATGCCCAGAGATTATATTTTTCAGTATCATAATTTAAAGTCCAATCTAGAGAGGGAGATATTTACACCTCTTAGAGTAGATTATGTTTCTCCTTATCCTCTTTGTTCGTTTGATCGAGTTCCAGAAGAACTCGAGATTTGGGCCTCAGAAAATATTGTCAGTCCCGCTGCGCGGCCTTTTAGACCCATAAGTATTGTTTTAGAGGGTGATAGTCGTATTGGGAAGACAATGTGGGCTCGGTCTCTCGGCCCACACAATTATTTATGCGGTCACTTGGATCTCAGTCCAAGAGTCTATAGTAATGACGTATGGTATAACGTCATTGATGATGTTGATCCGCATTATCTCAAGCACTTCAAGGAATTTATGGGGGCCCAGAGAGACTGGCAAAGCAACACAAAGTATGGAAAGCCCGTTCAAGTTAAAGGAGGCATTCCGACAATCTTCCTCTGCAATCCTGGGCCCCATTCGAGCTATAAAGAGTATTTAGACGAAGATAGGAACGCAGCATTAAAGAACTGGGCTGTTAAGAATGTCGTGTTCGACAGCGACAGTCCCCCTCCAGCTCCTTTCAAGAGACGCCAGAGGCGACAGATCAGGGGGGGATAA
Protein Sequence MPRVNAFSVSAKNIFLTYPKCPLSKETVLDLLRNISCPSDKLFIRVAQEKHEDGSLHIHALIQFKGKARFRNARHFDLIHPHSSSQFHPNIQGAKSSSDVKSYIEKDGDFIDWGFFQIDGRSARGGQQTANDAAAEALNSGSAEAALAISVKMPRDYIFQYHNLKSNLEREIFTPLRVDYVSPYPLCSFDRVPEELEIWASENIVSPAARPFRPISIVLEGDSRIGKTMWARSLGPHNYLCGHLDLSPRVYSNDVWYNVIDDVDPHYLKHFKEFMGAQRDWQSNTKYGKPVQVKGGIPTIFLCNPGPHSSYKEYLDEDRNAALKNWAVKNVVFDSDSPPPAPFKRRQRRQIRGG

NCBI Accession YP_002224033.1
Location 2187-2426
Protein Name AC4
Coding Region ATGCCCTTATCCAGTTCAAGGGTAAGGCCAGATTCAGAAATGCAAGACATTTCGATCTCATCCATCCTCATAGCTCCTCCCAATTCCATCCAAATATCCAGGGAGCTAAGTCCTCCTCTGATGTTAAGTCCTATATCGAGAAGGACGGAGATTTCATCGACTGGGGGTTCTTTCAGATCGATGGAAGATCTGCTAGAGGAGGTCAACAGACAGCTAATGATGCTGCAGCGGAGGCCTTAA
Protein Sequence MPLSSSRVRPDSEMQDISISSILIAPPNSIQISRELSPPLMLSPISRRTEISSTGGSFRSMEDLLEEVNRQLMMLQRRP

References More References in PubMed

1

The Jatropha leaf curl Gujarat virus on infection in Jatropha regulates the sugar and tricarboxylic acid cycle metabolic pathways.

More P, et al.  3 Biotech. 2022 Oct;12(10):275. doi: 10.1007/s13205-022-03306-z. Epub 2022 Sep 12.

PMID: 36110567
2

Mixed infection of a new begomovirus, Jatropha leaf curl Guntur virus and recombinant/chimeric jatropha leaf curl Gujarat virus in Jatropha gossypiifolia.

Gireeshbai S, et al.  Lett Appl Microbiol. 2022 Oct;75(4):1000-1009. doi: 10.1111/lam.13774. Epub 2022 Jul 2.

PMID: 35723883
3

Artificial miRNA mediated resistance in tobacco against Jatropha leaf curl Gujarat virus by targeting RNA silencing suppressors.

More P, et al.  Sci Rep. 2021 Jan 13;11(1):890. doi: 10.1038/s41598-020-79134-z.

PMID: 33441589
4

Isolation and sequence characterization of DNA-A genome of a new begomovirus strain associated with severe leaf curling symptoms of Jatropha curcas L.

Chauhan S, et al.  Gene. 2018 Jul 20;664:37-43. doi: 10.1016/j.gene.2018.04.062. Epub 2018 Apr 22.

PMID: 29684487
5

Molecular characterization of a begomovirus associated with yellow mosaic disease of Acalypha indica.

Kumar S, et al.  Virusdisease. 2025 Jun;36(2):343-352. doi: 10.1007/s13337-025-00919-9. Epub 2025 May 8.

PMID: 41018216
6

First report of a complete genome sequence for a begomovirus infecting Jatropha gossypifolia in the Americas.

Simmonds-Gordon RN, et al.  Arch Virol. 2014 Oct;159(10):2815-8. doi: 10.1007/s00705-014-2112-5. Epub 2014 May 29.

PMID: 24872185
7

Molecular identification of a new begomovirus associated with yellow mosaic disease of Jatropha gossypifolia in India.

Snehi SK, et al.  Arch Virol. 2011 Dec;156(12):2303-7. doi: 10.1007/s00705-011-1118-5. Epub 2011 Oct 5.

PMID: 21971870
8

A melting pot of Old World begomoviruses and their satellites infecting a collection of Gossypium species in Pakistan.

Nawaz-ul-Rehman MS, et al.  PLoS One. 2012;7(8):e40050. doi: 10.1371/journal.pone.0040050. Epub 2012 Aug 10.

PMID: 22899988
9

Molecular identification of a new begomovirus associated with mosaic disease of Jatropha curcas L. in Nigeria.

Kashina BD, et al.  Arch Virol. 2013 Feb;158(2):511-4. doi: 10.1007/s00705-012-1512-7. Epub 2012 Oct 17.

PMID: 23074041
10

Characterization of a novel begomovirus associated with yellow mosaic disease of three ornamental species of Jatropha grown in India.

Srivastava A, et al.  Virus Res. 2015 Apr 2;201:41-9. doi: 10.1016/j.virusres.2015.02.015. Epub 2015 Feb 23.

PMID: 25720372