Jatropha leaf curl Gujarat virus

Basic Information

Genus Begomovirus
NCBI Assembly GCF_003029055.1
Isolate India
Release date 2018/8/26
Submitter Agarwal,P., More,P., Agarwal,P.K.
Host
Vector
Download Genome |GFF3 |PEP |CDS

Genomic Organization

JBrowse

Genome

NC_038962
ACCGGATGGCCGCGCCCCGCTTTGTGGTGGGCCCCCCCACGTGGAGATGTCCCCCTATCAGAACACTCGCTGAAAGCTTTGATATTTGTGGTCCCCCTATAACAACTTGTCGCCCAAGTTGTTCATCTGCACAATGTGGGACCCTCTCCTCAACGAGTTCCCAGATTCCGTCCACGGTTTCCGGTGTATGCTTGCCGTGAAATACCTTCAGTTGGTGGAAGGTACCTATTCTCCTGACACTCTGGGTCACGAGTTAATCAGGGATCTCATATCTGTCATCAGGGCGAAGAATTATGCCGAAGCGACCAGCAGATATCATCATTTCCACACCAGGCTCGAAGGTTCGTCGCCGTCTGAACTTCGACAGCCCATATGCCAGCCGTGCAGCTGCCCCTACTGTCCGCGTCACAAGAAGTCAGGCCTGGACCAACAGGCCCATGAATCGCAAGCCCAAGTGGTACAGGATTTATAGAAGCCCAGATGTCCCTAAGGGCTGTGAAGGCCCATGTAAGGTCCAGTCCTTTGAGTCTAGACACGACGTCGTTCATATAGGTAAGGTCATGTGCATCTCAGATGTCACCCGTGGAACAGGGTTCACCCATCGCGTAGGTAAGAGGTTCTGCGTCAAGTCCGTGTACATCCTGGGCAAGATATGGATGGACGAAAACATCAAGACCAAGAACCACACGAACACTGTGATGTTCTTCCTCGTCAGGGATCGTAGGCCCGTGGACAAACCCCAGGATTTTGGTGAGGTGTTCAACATGTTCGATAACGAGCCCAGTACTGCTACGGTTAAAAACATGTACCGTGATCGGTACCAGGTGTTAAGGAAGTGGAGTTCCACTGTCACTGGTGGTCAGTATGCGAGCAAAGAGCAGGCAATAGTTAGGCGTTTTTTTAGGGTTAATAATTATGTTGTGTATAATCAGCAAGAGGCTGGTAAGTACGAAAACCATACGGAGAATGCATTGATGCTGTACATGGCGTGTACTCACGCCTCTAACCCCGTGTATGCTACGCTTAAGATACGGATCTACTTCTACGATTCAGTATCCAATTAATAAATTTTAAATTTTATTAAATTTGACTGCTCAACTGATTCAGTCCCTGTGAGTACACTGTACAATACATGCTCTACGGCTCTAACGACCGTATTTATACATATGACCCCTAACATGTCCAGGTATCTGAGTACCTGGTACCTAAAAACCCTCAAGAAACGCAAGGTCTGAGGCCGTAAGGTCGTCCAGATTTTGAAATCCATCCAGCATTGATGTAGTCCCAACGCTTTCCTCAGGTTGTGGTTGAACCGTATCTGGACGGTTATTATGTCGTGTTCCATCAGGAACGGCCGGCTGCTGTGGTCTATGATCTTGAAATAGAGGGGATTTGGAACCTCCCAGGTATAGACGCCATTCATCGCCTGAGCTGCAGTGATGAGTTCCCCTGTGCGTGAATCCATGGTTGTGGCAGTTGATGTGCACGTAGTACGAGCACCCGCAGTTGAGGTCTACTCTCCGTCGCCGGATGGCCCTACGCTTAGCTGCCCTGTGTTGAACCTTGATCGGCACTGGAGTAGAGTGGCCCGTCGAGGGAGATGAAGGTCGCATTTCTTATTGCCCAAGCCTTCAATGCCGTATTCTTCGGCTCGTCAAGGAACTCTTTATAGCTGGAATTGGGCCCAGGATTGCACAGGAAGATAGTGGGTATCCCACCTTTAATTTGAACCGGCTTTCCGTATTTGGTGTTGCTTTGCCAGTCCCTCTGGGCCCCCATGAATTCCTTGAAGTGCTTTAGGTAGTGGGGATCTACGTCATCAATGACGTTGTACCACGCGTCGTTTCTGTAGACCCTAGGACTCAAGTCCAGATGGCCACATAGGTAGTTATGTGGACCCAATGACCTAGCCCACATCGTCTTCCCCGTCCGACTATCGCCCTCTATGACAATACTATTAGGTCTCAAAGGCCGCGCAGCTGCATCCATGACGTTCTCTGACACCCACTGCTCAAGTTCATCTGGAACTTGGTCAAATGAAGATGATGAGAAGGGAGAAACGTACACCTCGGCGGGAGGTGTAAAAATCTTGTCCAGATTTGAGCTGATGTTATGGAAGTCCCTGACATAATCCCTAGGTGCTAATTCCCTAAGGATCCTAAGAGCCTCTGACTTACTTCCGCTGTTAATTGCTGCGGCGTAAGCGTCGTTCGCAGTCTGTTGACCCCCCCGTGCAGATCGCCCGTCGATCTGGAATGTGCCCCATTCAAGGGTATCTCCGTCCTTGTCGATGTAGGACTTGACGTCGGAGCTGGATTTAGCTCCCTGTATGTTCGGATGGAAATGTGCTGACCTGGTTGGGGATACCAGGTCGAAGAATCGCTGATTCTGGCATTTGTATTTTCCGTTGAATTGGATGAGCACATGCAGATGAGGCTCCCCATTCTCGTGTATCTCTCGGCAGATTTTGATGAATTTAGGGCTAGTGGGCGTTTGAAGCCCCCTAATTTGGGAAAGAGCCTCTTCTTTAGTGAGAGAGCACCGAGGATATGTGAGGAAATAATTCTTAGCGTTTATAATAAAACGCTTGGGTGGAGACATTTTCTCTCTCCTGAGACCCAATTGGTGCCTCTTCCATTTACTCCTGTAATCGGGTATAAGGTCTCAATATATATGATGATACCCAAATGGCACGGAGTGTAAATATGTGGAATATAATTTGAATTTCAAATTGACACGCGGCCATCCTTATAATATT

Gene Information

NCBI Accession YP_009508299.1
Location 134-472
Gene Name V2
Protein Name precoat protein
Coding Region ATGTGGGACCCTCTCCTCAACGAGTTCCCAGATTCCGTCCACGGTTTCCGGTGTATGCTTGCCGTGAAATACCTTCAGTTGGTGGAAGGTACCTATTCTCCTGACACTCTGGGTCACGAGTTAATCAGGGATCTCATATCTGTCATCAGGGCGAAGAATTATGCCGAAGCGACCAGCAGATATCATCATTTCCACACCAGGCTCGAAGGTTCGTCGCCGTCTGAACTTCGACAGCCCATATGCCAGCCGTGCAGCTGCCCCTACTGTCCGCGTCACAAGAAGTCAGGCCTGGACCAACAGGCCCATGAATCGCAAGCCCAAGTGGTACAGGATTTATAG
Protein Sequence MWDPLLNEFPDSVHGFRCMLAVKYLQLVEGTYSPDTLGHELIRDLISVIRAKNYAEATSRYHHFHTRLEGSSPSELRQPICQPCSCPYCPRHKKSGLDQQAHESQAQVVQDL

NCBI Accession YP_009508300.1
Location 294-1064
Gene Name V1
Protein Name coat protein
Coding Region ATGCCGAAGCGACCAGCAGATATCATCATTTCCACACCAGGCTCGAAGGTTCGTCGCCGTCTGAACTTCGACAGCCCATATGCCAGCCGTGCAGCTGCCCCTACTGTCCGCGTCACAAGAAGTCAGGCCTGGACCAACAGGCCCATGAATCGCAAGCCCAAGTGGTACAGGATTTATAGAAGCCCAGATGTCCCTAAGGGCTGTGAAGGCCCATGTAAGGTCCAGTCCTTTGAGTCTAGACACGACGTCGTTCATATAGGTAAGGTCATGTGCATCTCAGATGTCACCCGTGGAACAGGGTTCACCCATCGCGTAGGTAAGAGGTTCTGCGTCAAGTCCGTGTACATCCTGGGCAAGATATGGATGGACGAAAACATCAAGACCAAGAACCACACGAACACTGTGATGTTCTTCCTCGTCAGGGATCGTAGGCCCGTGGACAAACCCCAGGATTTTGGTGAGGTGTTCAACATGTTCGATAACGAGCCCAGTACTGCTACGGTTAAAAACATGTACCGTGATCGGTACCAGGTGTTAAGGAAGTGGAGTTCCACTGTCACTGGTGGTCAGTATGCGAGCAAAGAGCAGGCAATAGTTAGGCGTTTTTTTAGGGTTAATAATTATGTTGTGTATAATCAGCAAGAGGCTGGTAAGTACGAAAACCATACGGAGAATGCATTGATGCTGTACATGGCGTGTACTCACGCCTCTAACCCCGTGTATGCTACGCTTAAGATACGGATCTACTTCTACGATTCAGTATCCAATTAA
Protein Sequence MPKRPADIIISTPGSKVRRRLNFDSPYASRAAAPTVRVTRSQAWTNRPMNRKPKWYRIYRSPDVPKGCEGPCKVQSFESRHDVVHIGKVMCISDVTRGTGFTHRVGKRFCVKSVYILGKIWMDENIKTKNHTNTVMFFLVRDRRPVDKPQDFGEVFNMFDNEPSTATVKNMYRDRYQVLRKWSSTVTGGQYASKEQAIVRRFFRVNNYVVYNQQEAGKYENHTENALMLYMACTHASNPVYATLKIRIYFYDSVSN

NCBI Accession YP_009508301.1
Location 1061-1465
Gene Name C3
Protein Name AL3 protein
Coding Region ATGGATTCACGCACAGGGGAACTCATCACTGCAGCTCAGGCGATGAATGGCGTCTATACCTGGGAGGTTCCAAATCCCCTCTATTTCAAGATCATAGACCACAGCAGCCGGCCGTTCCTGATGGAACACGACATAATAACCGTCCAGATACGGTTCAACCACAACCTGAGGAAAGCGTTGGGACTACATCAATGCTGGATGGATTTCAAAATCTGGACGACCTTACGGCCTCAGACCTTGCGTTTCTTGAGGGTTTTTAGGTACCAGGTACTCAGATACCTGGACATGTTAGGGGTCATATGTATAAATACGGTCGTTAGAGCCGTAGAGCATGTATTGTACAGTGTACTCACAGGGACTGAATCAGTTGAGCAGTCAAATTTAATAAAATTTAAAATTTATTAA
Protein Sequence MDSRTGELITAAQAMNGVYTWEVPNPLYFKIIDHSSRPFLMEHDIITVQIRFNHNLRKALGLHQCWMDFKIWTTLRPQTLRFLRVFRYQVLRYLDMLGVICINTVVRAVEHVLYSVLTGTESVEQSNLIKFKIY

NCBI Accession YP_009508302.1
Location 1206-1613
Gene Name C2
Protein Name transcription activator protein
Coding Region ATGCGACCTTCATCTCCCTCGACGGGCCACTCTACTCCAGTGCCGATCAAGGTTCAACACAGGGCAGCTAAGCGTAGGGCCATCCGGCGACGGAGAGTAGACCTCAACTGCGGGTGCTCGTACTACGTGCACATCAACTGCCACAACCATGGATTCACGCACAGGGGAACTCATCACTGCAGCTCAGGCGATGAATGGCGTCTATACCTGGGAGGTTCCAAATCCCCTCTATTTCAAGATCATAGACCACAGCAGCCGGCCGTTCCTGATGGAACACGACATAATAACCGTCCAGATACGGTTCAACCACAACCTGAGGAAAGCGTTGGGACTACATCAATGCTGGATGGATTTCAAAATCTGGACGACCTTACGGCCTCAGACCTTGCGTTTCTTGAGGGTTTTTAG
Protein Sequence MRPSSPSTGHSTPVPIKVQHRAAKRRAIRRRRVDLNCGCSYYVHINCHNHGFTHRGTHHCSSGDEWRLYLGGSKSPLFQDHRPQQPAVPDGTRHNNRPDTVQPQPEESVGTTSMLDGFQNLDDLTASDLAFLEGF

NCBI Accession YP_009508303.1
Location 1543-2601
Gene Name C1
Protein Name replication initiator protein
Coding Region ATGTCTCCACCCAAGCGTTTTATTATAAACGCTAAGAATTATTTCCTCACATATCCTCGGTGCTCTCTCACTAAAGAAGAGGCTCTTTCCCAAATTAGGGGGCTTCAAACGCCCACTAGCCCTAAATTCATCAAAATCTGCCGAGAGATACACGAGAATGGGGAGCCTCATCTGCATGTGCTCATCCAATTCAACGGAAAATACAAATGCCAGAATCAGCGATTCTTCGACCTGGTATCCCCAACCAGGTCAGCACATTTCCATCCGAACATACAGGGAGCTAAATCCAGCTCCGACGTCAAGTCCTACATCGACAAGGACGGAGATACCCTTGAATGGGGCACATTCCAGATCGACGGGCGATCTGCACGGGGGGGTCAACAGACTGCGAACGACGCTTACGCCGCAGCAATTAACAGCGGAAGTAAGTCAGAGGCTCTTAGGATCCTTAGGGAATTAGCACCTAGGGATTATGTCAGGGACTTCCATAACATCAGCTCAAATCTGGACAAGATTTTTACACCTCCCGCCGAGGTGTACGTTTCTCCCTTCTCATCATCTTCATTTGACCAAGTTCCAGATGAACTTGAGCAGTGGGTGTCAGAGAACGTCATGGATGCAGCTGCGCGGCCTTTGAGACCTAATAGTATTGTCATAGAGGGCGATAGTCGGACGGGGAAGACGATGTGGGCTAGGTCATTGGGTCCACATAACTACCTATGTGGCCATCTGGACTTGAGTCCTAGGGTCTACAGAAACGACGCGTGGTACAACGTCATTGATGACGTAGATCCCCACTACCTAAAGCACTTCAAGGAATTCATGGGGGCCCAGAGGGACTGGCAAAGCAACACCAAATACGGAAAGCCGGTTCAAATTAAAGGTGGGATACCCACTATCTTCCTGTGCAATCCTGGGCCCAATTCCAGCTATAAAGAGTTCCTTGACGAGCCGAAGAATACGGCATTGAAGGCTTGGGCAATAAGAAATGCGACCTTCATCTCCCTCGACGGGCCACTCTACTCCAGTGCCGATCAAGGTTCAACACAGGGCAGCTAA
Protein Sequence MSPPKRFIINAKNYFLTYPRCSLTKEEALSQIRGLQTPTSPKFIKICREIHENGEPHLHVLIQFNGKYKCQNQRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYIDKDGDTLEWGTFQIDGRSARGGQQTANDAYAAAINSGSKSEALRILRELAPRDYVRDFHNISSNLDKIFTPPAEVYVSPFSSSSFDQVPDELEQWVSENVMDAAARPLRPNSIVIEGDSRTGKTMWARSLGPHNYLCGHLDLSPRVYRNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLDEPKNTALKAWAIRNATFISLDGPLYSSADQGSTQGS

NCBI Accession YP_009508304.1
Location 2142-2444
Gene Name C4
Protein Name C4 protein
Coding Region ATGGGGAGCCTCATCTGCATGTGCTCATCCAATTCAACGGAAAATACAAATGCCAGAATCAGCGATTCTTCGACCTGGTATCCCCAACCAGGTCAGCACATTTCCATCCGAACATACAGGGAGCTAAATCCAGCTCCGACGTCAAGTCCTACATCGACAAGGACGGAGATACCCTTGAATGGGGCACATTCCAGATCGACGGGCGATCTGCACGGGGGGGTCAACAGACTGCGAACGACGCTTACGCCGCAGCAATTAACAGCGGAAGTAAGTCAGAGGCTCTTAGGATCCTTAGGGAATTAG
Protein Sequence MGSLICMCSSNSTENTNARISDSSTWYPQPGQHISIRTYRELNPAPTSSPTSTRTEIPLNGAHSRSTGDLHGGVNRLRTTLTPQQLTAEVSQRLLGSLGN

References More References in PubMed

1

The Jatropha leaf curl Gujarat virus on infection in Jatropha regulates the sugar and tricarboxylic acid cycle metabolic pathways.

More P, et al.  3 Biotech. 2022 Oct;12(10):275. doi: 10.1007/s13205-022-03306-z. Epub 2022 Sep 12.

PMID: 36110567
2

Mixed infection of a new begomovirus, Jatropha leaf curl Guntur virus and recombinant/chimeric jatropha leaf curl Gujarat virus in Jatropha gossypiifolia.

Gireeshbai S, et al.  Lett Appl Microbiol. 2022 Oct;75(4):1000-1009. doi: 10.1111/lam.13774. Epub 2022 Jul 2.

PMID: 35723883
3

Artificial miRNA mediated resistance in tobacco against Jatropha leaf curl Gujarat virus by targeting RNA silencing suppressors.

More P, et al.  Sci Rep. 2021 Jan 13;11(1):890. doi: 10.1038/s41598-020-79134-z.

PMID: 33441589