Genus | Begomovirus |
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NCBI Assembly | GCF_000859185.1 |
Isolate | United Kingdom:Norfolk |
Release date | 2015/2/13 |
Submitter | Briddon,R.W. |
Host | |
Download | Genome |GFF3 |PEP |CDS |
NCBI Accession | NP_991332.1 |
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Location | 159-509 |
Gene Name | V2 |
Protein Name | V2 protein |
Coding Region | ATGTGGGATCCTTTAGTTAACGATTTCCCTGAAACCGTTCACGGTTTTAGGTGTATGTTAGCGGTTAAGTACCTCCTACTTGTTGAATCTACGTACGCTCCAGATACTGTTGGGTACGATCTTGTACGCGATCTTATTGGAGTTGTTCGAGCTAAGAACTATGTCGAAGCGTCCTGCAGATATAGGAATTTTCACACCCGTCTCCAAGGTACGGCGCCGTCTGAACTTCGACAGCCCGTATGTCAGCCGTGCGAGTGCCCCCATTGCCCTCGTCACAAACAAAAGGAGATCATGGGCTCAGCGGCCCATGTATCGGAAGCCCAGGATGTACAGAATGTACAGAAGTCCTGA |
Protein Sequence | MWDPLVNDFPETVHGFRCMLAVKYLLLVESTYAPDTVGYDLVRDLIGVVRAKNYVEASCRYRNFHTRLQGTAPSELRQPVCQPCECPHCPRHKQKEIMGSAAHVSEAQDVQNVQKS |
NCBI Accession | NP_991333.1 |
---|---|
Location | 319-1092 |
Gene Name | V1 |
Protein Name | coat protein |
Coding Region | ATGTCGAAGCGTCCTGCAGATATAGGAATTTTCACACCCGTCTCCAAGGTACGGCGCCGTCTGAACTTCGACAGCCCGTATGTCAGCCGTGCGAGTGCCCCCATTGCCCTCGTCACAAACAAAAGGAGATCATGGGCTCAGCGGCCCATGTATCGGAAGCCCAGGATGTACAGAATGTACAGAAGTCCTGATGTTCCCAAGGGGTGTGAAGGTCCGTGTAAGGTACAGTCATTTGAGACGAAGAATGATGTTGGGCATTCTGGTACTCTGCTCTGTGTTTCTGATATCACCCGTGGTAATGGACTTACTCATCGTGTTGGGAAGAGATTTTGTATAAAATCTGTTTATATTATTGGTAAAATCTGGATGGATGACAATATTAAGACGAAGAATCACACTAACAACGTGTTATTCTGGTTAGTTAGGGATAGACGTCCTGGTTCAACTCCTTATGGATTCCAAGAGGCATTCAATATGATTCAAAATGAGCCCAGTACAGCCACTATTAAACAGGAGTTGAGAGATCGTTTGCAGGTGTTACATAGGTTCAGTGCGACTGTTACAGGTGGACAATATGTGTCCAAGGAACAAGCTATCATCAAGAGGTTCTGGAAGTTGAATCATCATGTCACTTACAATCATCAGGAGCAAGCTAAATATGAGAACCATACTGAAAATGCTTTGTTATTGTATATGGCGTGTACTCATGCCAGTAATCCAGTGTATGCCACATTAAAAATCAGAGTGTATTTCTACGATTCAGTACAAAATTAA |
Protein Sequence | MSKRPADIGIFTPVSKVRRRLNFDSPYVSRASAPIALVTNKRRSWAQRPMYRKPRMYRMYRSPDVPKGCEGPCKVQSFETKNDVGHSGTLLCVSDITRGNGLTHRVGKRFCIKSVYIIGKIWMDDNIKTKNHTNNVLFWLVRDRRPGSTPYGFQEAFNMIQNEPSTATIKQELRDRLQVLHRFSATVTGGQYVSKEQAIIKRFWKLNHHVTYNHQEQAKYENHTENALLLYMACTHASNPVYATLKIRVYFYDSVQN |
NCBI Accession | NP_991334.1 |
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Location | 1089-1493 |
Gene Name | C3 |
Protein Name | C3 protein |
Coding Region | ATGGATTCACGCACAGGGGACACCATCACTGCAGCTCAGGCAAGGAATGGTGCGTATACCTGGACAGTGCCCAATCCCCTATATTTCAAAATCACGACACACGCGCAACGGCCACTCAACATGGATCAGGATATAATAACTTTACAGATACAATTCAACCACAACCTCAGGAATCAACTGCACATACACAAGTGCTTCCTCTCTTTCAAGATTTGGACTCGCTTACATCCTCAGACTTTGCATTTCTTGAGGGTATTTAGGACACAAGTGTTGAAGTACTTAGATAATTTGGGTGTAATATCAATTAACAATGTAATTAGAGCAGTAGATCATGTATTATATAATGTATTCGAAGGAACTGAATGTGTACAACAATTTACAGATATAAAATTTAAGCTTTATTAA |
Protein Sequence | MDSRTGDTITAAQARNGAYTWTVPNPLYFKITTHAQRPLNMDQDIITLQIQFNHNLRNQLHIHKCFLSFKIWTRLHPQTLHFLRVFRTQVLKYLDNLGVISINNVIRAVDHVLYNVFEGTECVQQFTDIKFKLY |
NCBI Accession | NP_991335.1 |
---|---|
Location | 1234-1641 |
Gene Name | C2 |
Protein Name | C2 protein |
Coding Region | ATGCAGCCTTCGTCACCCTCTACGGCCCACTCTACTCAGGTACCCATCAAGGTGCGACACAGATCAGAGAAGAGGAGAGCACCTCGCCGGAGGAGGATTGATCTGAACTGCGGGTGTTCTATTTACGTCGCATTGGGGTGTGCAAATCATGGATTCACGCACAGGGGACACCATCACTGCAGCTCAGGCAAGGAATGGTGCGTATACCTGGACAGTGCCCAATCCCCTATATTTCAAAATCACGACACACGCGCAACGGCCACTCAACATGGATCAGGATATAATAACTTTACAGATACAATTCAACCACAACCTCAGGAATCAACTGCACATACACAAGTGCTTCCTCTCTTTCAAGATTTGGACTCGCTTACATCCTCAGACTTTGCATTTCTTGAGGGTATTTAG |
Protein Sequence | MQPSSPSTAHSTQVPIKVRHRSEKRRAPRRRRIDLNCGCSIYVALGCANHGFTHRGHHHCSSGKEWCVYLDSAQSPIFQNHDTRATATQHGSGYNNFTDTIQPQPQESTAHTQVLPLFQDLDSLTSSDFAFLEGI |
NCBI Accession | NP_991336.1 |
---|---|
Location | 1541-2719 |
Gene Name | C1 |
Protein Name | replication associated protein |
Coding Region | ATGCCATGCCCCCCAGAATATAAATTGCCCCCCAATGCCCCCCCATTCAGCAGGAGTTTGAAGTGCCCCCCAATTGACCAAGTCAACATGCCTAGAGCTGGGCGTTTCTCTTTAAAAGCCAAAAATTATTTCCTCACATACCCACAATGCTCCATCGACAAAGAAGAAGCCCTAACCCAATTACAAAAATTAAACACACCAACTAACATTAAATTCATAAGGATCTGCAGAGAGCTACATCAAAATGGGAGCCCTCATCTCCACGTCCTCATCCAGTTCGAGGGGAAATACAACTGCACAAATCAACGATTCTTCGACCTAGTATCCCCAAGCAGGTCAGCACATTTCCATCCCAACATTCAGGCGGCTAAAAGCTCGTCAGATGTCAAGACCTATATGGAGAAAGACGGAGACATCGTTGATTTTGGAGTGTTCCAGGTCGATGGAAGATCAGCTAGAGGAGGTTGCCAGTCTGCCACCGACGCGTATGCCGAGGCAATCAACTCAGGATCTAAGTCATCGGCACTCTGTATATTAAGGGAGAAAGCTCCCAAAGATTTTGTTTTACAATTTCATAATTTAAATAGCAATTTAGATAGGATTTTTGCTCCTCCGTTGGAGGAATTTGTTTCTCCTTTTTTATCTTCTTCATTTGATCAAGTTCCAGAGCAACTTGAGGGATGGGCTGCCGAGAACGTCAGGGATTCCGCTGCGCGGCCATGGAGGCCCATTAGCATTGTGATAGAAGGGGATAGCAGGACAGGGAAGACCATGTGGGCCAGGTCTTTGAGTCCACGTCATAACTACCTTTGCGGCCATCTTGACTTAAGCCCCAAGGTTTACAGCAACGAGGCCTGGTACAACGTCATTGATGACGTGGATCCCCACTATCTAAAGCACTTTAAAGAGTTCATGGGGGCCCAAAGGGACTGGCAAAGCAACACCAAGTACGGGAAACCAATTCAAATTAAAGGAGGTATCCCAACAATCTTCCTCTGCAATCCAGGCCCAACGTCATCATACACCGAGTATTTAGACGAGGACAAGAATGCTGCCCTAAAAGCCTGGGCAATTAAAAATGCAGCCTTCGTCACCCTCTACGGCCCACTCTACTCAGGTACCCATCAAGGTGCGACACAGATCAGAGAAGAGGAGAGCACCTCGCCGGAGGAGGATTGA |
Protein Sequence | MPCPPEYKLPPNAPPFSRSLKCPPIDQVNMPRAGRFSLKAKNYFLTYPQCSIDKEEALTQLQKLNTPTNIKFIRICRELHQNGSPHLHVLIQFEGKYNCTNQRFFDLVSPSRSAHFHPNIQAAKSSSDVKTYMEKDGDIVDFGVFQVDGRSARGGCQSATDAYAEAINSGSKSSALCILREKAPKDFVLQFHNLNSNLDRIFAPPLEEFVSPFLSSSFDQVPEQLEGWAAENVRDSAARPWRPISIVIEGDSRTGKTMWARSLSPRHNYLCGHLDLSPKVYSNEAWYNVIDDVDPHYLKHFKEFMGAQRDWQSNTKYGKPIQIKGGIPTIFLCNPGPTSSYTEYLDEDKNAALKAWAIKNAAFVTLYGPLYSGTHQGATQIREEESTSPEED |
NCBI Accession | NP_991337.1 |
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Location | 2182-2337 |
Gene Name | C4 |
Protein Name | C4 protein |
Coding Region | ATGTCAAGACCTATATGGAGAAAGACGGAGACATCGTTGATTTTGGAGTGTTCCAGGTCGATGGAAGATCAGCTAGAGGAGGTTGCCAGTCTGCCACCGACGCGTATGCCGAGGCAATCAACTCAGGATCTAAGTCATCGGCACTCTGTATATTAA |
Protein Sequence | MSRPIWRKTETSLILECSRSMEDQLEEVASLPPTRMPRQSTQDLSHRHSVY |
1 |
Ogawa T, et al. Virus Res. 2008 Nov;137(2):235-44. doi: 10.1016/j.virusres.2008.07.021. Epub 2008 Sep 13. PMID: 18722488 |
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2 |
Lee G, et al. Arch Virol. 2011 May;156(5):785-91. doi: 10.1007/s00705-011-0916-0. Epub 2011 Jan 30. PMID: 21279729 |
3 |
Kitamura K, et al. Arch Virol. 2004 Jun;149(6):1221-9. doi: 10.1007/s00705-003-0276-5. Epub 2004 Feb 16. PMID: 15168208 |
4 |
Saunders K, et al. J Gen Virol. 2008 Dec;89(Pt 12):3165-3172. doi: 10.1099/vir.0.2008/003848-0. PMID: 19008407 |
5 |
Interaction of tomato yellow leaf curl virus with diverse betasatellites enhances symptom severity. Ito T, et al. Arch Virol. 2009;154(8):1233-9. doi: 10.1007/s00705-009-0431-8. Epub 2009 Jul 3. PMID: 19575277 |
6 |
A Novel Geminivirus of Ipomoea indica (Convolvulacae) from Southern Spain. Banks GK, et al. Plant Dis. 1999 May;83(5):486. doi: 10.1094/PDIS.1999.83.5.486B. PMID: 30845545 |
7 |
Park J, et al. Virus Res. 2011 Aug;159(2):124-31. doi: 10.1016/j.virusres.2011.04.017. Epub 2011 Apr 28. PMID: 21549772 |
8 |
Ueda S, et al. Arch Virol. 2008;153(3):417-26. doi: 10.1007/s00705-007-0011-8. Epub 2008 Jan 4. PMID: 18175045 |