Genus | Begomovirus |
---|---|
NCBI Assembly | GCF_013088155.1 |
Isolate | India |
Release date | 2021/6/1 |
Host | |
Download | Genome |GFF3 |PEP |CDS |
NCBI Accession | YP_010086869.1 |
---|---|
Location | 118-465 |
Gene Name | AV2 |
Protein Name | movement protein |
Coding Region | ATGTGGGATCCACTTTTAAACGAGTTCCCTGATACGGTTTACGGTTTTCGGTGTATGCTTTCTGTCAAATACTTGCAGCTATTGTCTGAAGGATACTCTCCGGATACGGTTGGGTACGAGTTAATTCGCGATCTAATTACTATTGTCCGATCCCGGAATTATGTCGAAGCGTCCTGCAGATATCGTAATTTCTACACCCGCGTCGAAAGTACGCCGGCGTCTGAACTTCGACAGCCCTTACGCGACCCGTGCTGGTGTCCCCACTGTCCGCGTCACAAAGTCAAGGCTATGGGCGAACAGGCCCATGAATCGGAAGCCCAGAATGTACAGAATGTACAGAAGCCCTGA |
Protein Sequence | MWDPLLNEFPDTVYGFRCMLSVKYLQLLSEGYSPDTVGYELIRDLITIVRSRNYVEASCRYRNFYTRVESTPASELRQPLRDPCWCPHCPRHKVKAMGEQAHESEAQNVQNVQKP |
NCBI Accession | YP_010086870.1 |
---|---|
Location | 278-1048 |
Gene Name | AV1 |
Protein Name | coat protein |
Coding Region | ATGTCGAAGCGTCCTGCAGATATCGTAATTTCTACACCCGCGTCGAAAGTACGCCGGCGTCTGAACTTCGACAGCCCTTACGCGACCCGTGCTGGTGTCCCCACTGTCCGCGTCACAAAGTCAAGGCTATGGGCGAACAGGCCCATGAATCGGAAGCCCAGAATGTACAGAATGTACAGAAGCCCTGATGTTCCAAGGGGCTGTGAGGGTCCATGTAAGGTACAGTCATTTGAGTCCAGACACGATGTAGTCCATATAGGTAAAGTCATGTGTATTAGTGATGTTACTCGCGGTACTGGGCTGACCCATAGAGTTGGGAAACGGTTTTGTGTGAAGTCAGTCTATGTATTGGGTAAGATCTGGATGGATGAAAATATAAAGTCCAAGAATCATACTAACAATGTGATGTTCTTCCTCGTTCGAGATCGACGTCCCACCGGCACGCCTCAAGATTTTGGAGATGTCTTCAACATGTTTGACAACGAGCCTAGCACTGCTACTGTGAAGAATGTCCATCGGGATCGTTACCAGGTCTTGAGGAAATGGTATGCAACTGTCACTGGTGGACAGTATGGTGCAAAGGAACAGGCTTTAGTTAAGAAGTTTGTTAGGGTTAATAATTATGTTGTTTACAACCAGCAAGAGGCAGGGAAATACGAGAATCATTCTGAGAATGCCCTGATGTTGTATATGGCATGTACTCATGCCTCTAATCCTGTTTACGCGACTCTTAAGATTAGGATCTACTTTTATGACTCTGTAACGAATTGA |
Protein Sequence | MSKRPADIVISTPASKVRRRLNFDSPYATRAGVPTVRVTKSRLWANRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDVVHIGKVMCISDVTRGTGLTHRVGKRFCVKSVYVLGKIWMDENIKSKNHTNNVMFFLVRDRRPTGTPQDFGDVFNMFDNEPSTATVKNVHRDRYQVLRKWYATVTGGQYGAKEQALVKKFVRVNNYVVYNQQEAGKYENHSENALMLYMACTHASNPVYATLKIRIYFYDSVTN |
NCBI Accession | YP_010086871.1 |
---|---|
Location | 1051-1455 |
Gene Name | AC3 |
Protein Name | replication enhancer protein |
Coding Region | ATGGATTCACGCACAGGGGAACCCATCACTGCAGCTCAAGCATGGAATGGCGTGTATATCTGGGACGTACCAAATCCCCTTTATTTCAAGATCCTAAGCCACTACGAGGCTCCATCAACATCGAGAATGACGATAATCACCATCAGGATCCAGTTCAATCACAACCTGAGGAAAGCACTGGGGATGCACAAGGGTTTTCTGACCTACCGAATCTGGACGACCTTACACCCTCCGATTGGTCTTTTCTTAAGAGTATTCCGAACCCAAGTCCTCAAGTATCTCAACAATCTAGGTGTAATTTCACTTAATTTTGTAATTAGGGCAATAAATCATGTATTGTGGAATGTAATTGCTCATACTGTAGAAGTGCAACAACTTTCAGAAATAAAATTCAAATTATATTAA |
Protein Sequence | MDSRTGEPITAAQAWNGVYIWDVPNPLYFKILSHYEAPSTSRMTIITIRIQFNHNLRKALGMHKGFLTYRIWTTLHPPIGLFLRVFRTQVLKYLNNLGVISLNFVIRAINHVLWNVIAHTVEVQQLSEIKFKLY |
NCBI Accession | YP_010086872.1 |
---|---|
Location | 1148-1600 |
Gene Name | AC2 |
Protein Name | transcription activator protein |
Coding Region | ATGCACTCTTCTTCACCCTCGAGGAACCACTATACTCAAGTGCCGATCAAAGTCCAACACAGAGAGGCCAAGAAGAGGATCAGACGGAGGAGAGTGGATCTTGATTGCGGCTGTTCATATTACCTATCCATCAACTGCCACGATCATGGATTCACGCACAGGGGAACCCATCACTGCAGCTCAAGCATGGAATGGCGTGTATATCTGGGACGTACCAAATCCCCTTTATTTCAAGATCCTAAGCCACTACGAGGCTCCATCAACATCGAGAATGACGATAATCACCATCAGGATCCAGTTCAATCACAACCTGAGGAAAGCACTGGGGATGCACAAGGGTTTTCTGACCTACCGAATCTGGACGACCTTACACCCTCCGATTGGTCTTTTCTTAAGAGTATTCCGAACCCAAGTCCTCAAGTATCTCAACAATCTAGGTGTAATTTCACTTAA |
Protein Sequence | MHSSSPSRNHYTQVPIKVQHREAKKRIRRRRVDLDCGCSYYLSINCHDHGFTHRGTHHCSSSMEWRVYLGRTKSPLFQDPKPLRGSINIENDDNHHQDPVQSQPEESTGDAQGFSDLPNLDDLTPSDWSFLKSIPNPSPQVSQQSRCNFT |
NCBI Accession | YP_010086873.1 |
---|---|
Location | 1497-2585 |
Gene Name | AC1 |
Protein Name | replication associated protein |
Coding Region | ATGCCTCCAAAGCGTTTTCTTATTAATTCCAAAAATTATTTCCTCACTTATCCGAAATGCTCTCTTACAAAAGAGGAAGCACTTTCCCAACTTCAAAACCTACAAACCCCAACAAATAAAAAATTCATCAAAATCTGCAAAGAGCTTCACGAGAATGGGGAACCTCATCTTCACGTGCTCATCCAGTTCGAGGGGAAATACAAGTGCCAGAATCAGCGATTCTTCGACCTGGTGTCCCCAAGCAGGTCAATACATTTCCATCCAAACATTCAGGGAGCTAAATCCAGCTCCGACGTCAAGTCCTATATCGACAAGGACGGAGACACCCTCGAATGGGGAGAGTTTCAGATCGATGGAAGATCTGCAAGAGGAGGACAACAGACAGCAAATGATGCTTACGCCCAGGCACTTAACACCGGCAGTAAGCCAGAGGCTCTTAGAGTACTTAGGGAGTTAGCTCCCAAAGATTATGTTTTACAATTTCATAATTTAAATGCCAATTTAGATAGGATTTTTACACCTCCCTTGGAGGTTTATGTTTCTCCTTTTTTATCTTCTTCTTTCAATCAAGTTCCAGAAGAACTTGAGGAATGGGTATCGGAAAACGTCATGGACGCCGCTGCGCGGCCTCTGCGTCCTTTGAGTTTAGTGTTAGAGGGAGACAGTCGTACGGGCAAAACGATGTGGGCACGGTCATTAGGACCACATAATTATCTTTGTGGCCATTTAGATCTGAGCCCTAAAGTCTACAGCAACGACGCGTGGTACAACGTCATTGATGACGTCGATCCGCACTTCCTCAAACACTTTAAAGAGTTCATGGGGGCCCAAAGGGACTGGCAATCAAACACGAAATACGGGAAGCCAGTTCAAATTAAAGGTGGGATCCCAACAATCTTCCTCTGCAATCCTGGGCCAAACTCATCGTATAAAGAGTACCTGGACGAGGAGAAGAACCAAGCCCTAAAAAACTGGGCTATTAAAAATGCACTCTTCTTCACCCTCGAGGAACCACTATACTCAAGTGCCGATCAAAGTCCAACACAGAGAGGCCAAGAAGAGGATCAGACGGAGGAGAGTGGATCTTGA |
Protein Sequence | MPPKRFLINSKNYFLTYPKCSLTKEEALSQLQNLQTPTNKKFIKICKELHENGEPHLHVLIQFEGKYKCQNQRFFDLVSPSRSIHFHPNIQGAKSSSDVKSYIDKDGDTLEWGEFQIDGRSARGGQQTANDAYAQALNTGSKPEALRVLRELAPKDYVLQFHNLNANLDRIFTPPLEVYVSPFLSSSFNQVPEELEEWVSENVMDAAARPLRPLSLVLEGDSRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHFLKHFKEFMGAQRDWQSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEYLDEEKNQALKNWAIKNALFFTLEEPLYSSADQSPTQRGQEEDQTEESGS |
NCBI Accession | YP_010086874.1 |
---|---|
Location | 2129-2431 |
Gene Name | AC4 |
Protein Name | regulatory protein |
Coding Region | ATGGGGAACCTCATCTTCACGTGCTCATCCAGTTCGAGGGGAAATACAAGTGCCAGAATCAGCGATTCTTCGACCTGGTGTCCCCAAGCAGGTCAATACATTTCCATCCAAACATTCAGGGAGCTAAATCCAGCTCCGACGTCAAGTCCTATATCGACAAGGACGGAGACACCCTCGAATGGGGAGAGTTTCAGATCGATGGAAGATCTGCAAGAGGAGGACAACAGACAGCAAATGATGCTTACGCCCAGGCACTTAACACCGGCAGTAAGCCAGAGGCTCTTAGAGTACTTAGGGAGTTAG |
Protein Sequence | MGNLIFTCSSSSRGNTSARISDSSTWCPQAGQYISIQTFRELNPAPTSSPISTRTETPSNGESFRSMEDLQEEDNRQQMMLTPRHLTPAVSQRLLEYLGS |
1 |
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2 |
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3 |
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4 |
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5 |
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6 |
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7 |
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8 |
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9 |
Venkataravanappa V, et al. Acta Virol. 2015 Jun;59(2):125-39. doi: 10.4149/av_2015_02_125. PMID: 26104329 |
10 |
Genetic control of yellow vein mosaic virus disease tolerance in Abelmoschus esculentus (L.) Moench. Senjam P, et al. J Genet. 2018 Mar;97(1):25-33. PMID: 29666322 |