Genus | Begomovirus |
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NCBI Assembly | GCF_002986605.1 |
Isolate | Pakistan:Faisalabad |
Release date | 2018/8/26 |
Submitter | Zia Ur Rehman,M., Haider,M.S., Zia ur Rehman,M. |
Host | |
Download | Genome |GFF3 |PEP |CDS |
NCBI Accession | YP_009508128.1 |
---|---|
Location | 130-477 |
Gene Name | av2 |
Protein Name | pre-coat protein |
Coding Region | ATGTGGGATCCACTTTTAAACGAGTTCCCCGAGACGGTTCACGGGTTTCGTTGCATGCTTGCGATAAAATACCTGCAACTGCTGTCTGAGGAATACTCTCCGGATACGGTAGGTTACGATTTAATTCGCGATTTAATTTCTATTTTACGATCTAGGAATTATGTCGAAGCGTCCTGCCGATATCGTCATTTCTACCCCCGCGTCGAAGGTGCGTCGGCGTCTGAACTTCGACAGCCCCTATGCAACCCGTGCAGTTGTCCCCACTGTCCGCGTCACAAAATCACGCATGTGGGCGAACAGGCCCATGAACCGGAAGCCCAGAATGTACAGAATGTACAGAAGCCCTGA |
Protein Sequence | MWDPLLNEFPETVHGFRCMLAIKYLQLLSEEYSPDTVGYDLIRDLISILRSRNYVEASCRYRHFYPRVEGASASELRQPLCNPCSCPHCPRHKITHVGEQAHEPEAQNVQNVQKP |
NCBI Accession | YP_009508129.1 |
---|---|
Location | 290-1060 |
Gene Name | av1 |
Protein Name | coat protein |
Coding Region | ATGTCGAAGCGTCCTGCCGATATCGTCATTTCTACCCCCGCGTCGAAGGTGCGTCGGCGTCTGAACTTCGACAGCCCCTATGCAACCCGTGCAGTTGTCCCCACTGTCCGCGTCACAAAATCACGCATGTGGGCGAACAGGCCCATGAACCGGAAGCCCAGAATGTACAGAATGTACAGAAGCCCTGATGTTCCAAGAGGCTGTGAGGGTCCATGTAAGGTCCAATCCTTTGAGTCCAGACACGATGTAGTCCATATAGGTAAGGTCATGTGTATTAGTGATGTTACTCGCGGTACTGGGCTGACCCATAGAGTTGGGAAACGTTTCTGTGTTAAATCAGTCTATGTATTGGGTAAGATCTGGATGGATGAAAACATAAAGTCCAAAAACCACACTAACAATGTGATGTTCTTCTTGGTCCGTGATCGACGGCCTGTGGATAAGCCTCAGGATTTTGGAGAGGTCTTCAACATGTTCGACAACGAGCCCAGCACCGCTACTGTCAAGAATGTTCATCGAGATCGCTACCAGGTGTTGAGGAAATGGTATGCAACAGTTACGGGTGGTCAATATGGAGCAAAGGAACAGGCCTTGGTCAAGAAGTTTGTCCGAGTTAACAATTATGTTGTTTACAATCAGCAAGAGGCAGGGAAATATGAGAATCATTCTGAGAATGCCCTGATGTTGTATATGGCATGTACCCATGCCTCTAATCCAGTTTACGCTACTCTTAAGATTAGGATTTACTTCTACGATTCTGTAACCAACTGA |
Protein Sequence | MSKRPADIVISTPASKVRRRLNFDSPYATRAVVPTVRVTKSRMWANRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDVVHIGKVMCISDVTRGTGLTHRVGKRFCVKSVYVLGKIWMDENIKSKNHTNNVMFFLVRDRRPVDKPQDFGEVFNMFDNEPSTATVKNVHRDRYQVLRKWYATVTGGQYGAKEQALVKKFVRVNNYVVYNQQEAGKYENHSENALMLYMACTHASNPVYATLKIRIYFYDSVTN |
NCBI Accession | YP_009508130.1 |
---|---|
Location | 1063-1467 |
Gene Name | ac3 |
Protein Name | replication enhancer protein |
Coding Region | ATGGATTCACGCACAGGGGAACCCATCACTGCAGCTCAAGCATGGAGTGGCGCCTATACCTGGGAGGTTCCAAATCCCCTCTATTTCAAGATCCTCAGCCACGACAACCGGCCATTCACAATGACAACGGACATAATAAAGATCAGAATCCAATTCAACTACAACCTTCGGAGAGCTCTGGGAGTCACAAGTGGTTTTCTGACCTACCGAATCTGGACGACCTTACGCCCTCCGACTGGTCTTTTCTTAAGGGTATTCAAGACACAAATCCTCAAGTATCTCAACAATCTGGGTGTAATCTCAATTAATTCAATTATCAGAGCTGTAAACCATGTATTATGGGAAAAAATAGAACAAACTGTGTACGTAGACATGAATTCAGAAATAAAATTCGATATTTATTAA |
Protein Sequence | MDSRTGEPITAAQAWSGAYTWEVPNPLYFKILSHDNRPFTMTTDIIKIRIQFNYNLRRALGVTSGFLTYRIWTTLRPPTGLFLRVFKTQILKYLNNLGVISINSIIRAVNHVLWEKIEQTVYVDMNSEIKFDIY |
NCBI Accession | YP_009508131.1 |
---|---|
Location | 1160-1612 |
Gene Name | ac2 |
Protein Name | transcriptional activator protein |
Coding Region | ATGCGATTTTCGTCACCCTCGAAGGACCACTGTACTCCGGTTCCAATCAAAGTACAGCACAGGGAAGCCAAGAGGGTACACAGGAGGAGGAGAGTCGATCTTGAATGCGGGTGTTCTTATTTTCTATCTATAAACTGCTTCAACCATGGATTCACGCACAGGGGAACCCATCACTGCAGCTCAAGCATGGAGTGGCGCCTATACCTGGGAGGTTCCAAATCCCCTCTATTTCAAGATCCTCAGCCACGACAACCGGCCATTCACAATGACAACGGACATAATAAAGATCAGAATCCAATTCAACTACAACCTTCGGAGAGCTCTGGGAGTCACAAGTGGTTTTCTGACCTACCGAATCTGGACGACCTTACGCCCTCCGACTGGTCTTTTCTTAAGGGTATTCAAGACACAAATCCTCAAGTATCTCAACAATCTGGGTGTAATCTCAATTAA |
Protein Sequence | MRFSSPSKDHCTPVPIKVQHREAKRVHRRRRVDLECGCSYFLSINCFNHGFTHRGTHHCSSSMEWRLYLGGSKSPLFQDPQPRQPAIHNDNGHNKDQNPIQLQPSESSGSHKWFSDLPNLDDLTPSDWSFLKGIQDTNPQVSQQSGCNLN |
NCBI Accession | YP_009508132.1 |
---|---|
Location | 1509-2600 |
Gene Name | ac1 |
Protein Name | replication associated protein |
Coding Region | ATGGCTCCTCCCAAACAATTTCAGATATATGCCAAAAATTATTTCCTCACTTATCCCACTTGCTCTCTTACTAAAGAGGAAGCACTTTCCCAATTACAAAACCTACAGACACCAGTAAACAAAAAATACATTAGAATCTGCAGAGAGTTTCATGAAAATGGGGAACCTCATCTTCACGTGCTCATCCAGTTCGAGGGCAAATACAAATGCAAAAATAACAGATTCTTCGACCTCGTATCCCCAACCAGGTCAGCACATTTCCATCCAAACATTCAGGGAGCTAAATCCAGCTCCGACGTCAAGTCCTACATCGCTAAGGACGGGGACATTCTCGACTGGGGCGAATTTCAGATCGACGGAAGATCAGCAAGAGGAGGGCAACAAACAGCCAACGACGCTTACGCCGCAGCACTTAACGCGGGAAGTAAGTCAGAGGCTCTTAGAGTCATTAAGGAACTAGCTCCTAAAGATTTTGTACTACAATTTCATAATTTAAATGCAAATCTAGACAGGATCTTTCAGGAGCCTCCAGCTCCTTATGTTTCTCCTTTTTCCTATTCTTCTTTCGATCAAGTTCCAGAAGAACTTGAAGAGTGGGTGTCTGAGAATGTTGTCGACGCCGCTGCGCGGCCCCTGAGACCTCAAAGTATAGTAATTGAGGGAGATAGTCGTACTGGGAAAACAATGTGGGCTAGGTCTCTAGGCCCACATAACTATTTATGTGGGCATTTGGATCTAAGCCCAAAAGTCTATAGTAACGACGCGTGGTACAACGTCATTGATGACGTCGACCCGCACTTCCTCAAGCACTTTAAGGAGTTTATGGGGGCCCAAAGGGACTGGCAGTCCAACACTAAGTACGGGAAGCCAGTTCAAATTAAAGGCGGCATACCGACAATCTTCTTATGCAATCCTGGTCCTAACAGCAGCTATAAAGAATTCCTCGACGAGGACAAGAACACAGCATTAAAGAATTGGGCTCTCAAAAATGCGATTTTCGTCACCCTCGAAGGACCACTGTACTCCGGTTCCAATCAAAGTACAGCACAGGGAAGCCAAGAGGGTACACAGGAGGAGGAGAGTCGATCTTGA |
Protein Sequence | MAPPKQFQIYAKNYFLTYPTCSLTKEEALSQLQNLQTPVNKKYIRICREFHENGEPHLHVLIQFEGKYKCKNNRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYIAKDGDILDWGEFQIDGRSARGGQQTANDAYAAALNAGSKSEALRVIKELAPKDFVLQFHNLNANLDRIFQEPPAPYVSPFSYSSFDQVPEELEEWVSENVVDAAARPLRPQSIVIEGDSRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHFLKHFKEFMGAQRDWQSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLDEDKNTALKNWALKNAIFVTLEGPLYSGSNQSTAQGSQEGTQEEESRS |
NCBI Accession | YP_009508133.1 |
---|---|
Location | 2141-2449 |
Gene Name | ac4 |
Protein Name | AC4 protein |
Coding Region | ATGAAAATGGGGAACCTCATCTTCACGTGCTCATCCAGTTCGAGGGCAAATACAAATGCAAAAATAACAGATTCTTCGACCTCGTATCCCCAACCAGGTCAGCACATTTCCATCCAAACATTCAGGGAGCTAAATCCAGCTCCGACGTCAAGTCCTACATCGCTAAGGACGGGGACATTCTCGACTGGGGCGAATTTCAGATCGACGGAAGATCAGCAAGAGGAGGGCAACAAACAGCCAACGACGCTTACGCCGCAGCACTTAACGCGGGAAGTAAGTCAGAGGCTCTTAGAGTCATTAAGGAACTAG |
Protein Sequence | MKMGNLIFTCSSSSRANTNAKITDSSTSYPQPGQHISIQTFRELNPAPTSSPTSLRTGTFSTGANFRSTEDQQEEGNKQPTTLTPQHLTREVSQRLLESLRN |
1 |
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2 |
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3 |
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4 |
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5 |
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6 |
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7 |
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8 |
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9 |
Infectivity of okra enation leaf curl virus and the role of its V2 protein in pathogenicity. Saeed F, et al. Virus Res. 2018 Aug 15;255:90-94. doi: 10.1016/j.virusres.2018.07.007. Epub 2018 Jul 18. PMID: 30009848 |
10 |
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