French bean leaf curl virus
Basic Information
| Genus | Begomovirus |
|---|---|
| NCBI Assembly | GCF_000899775.1 |
| Isolate | India |
| Release date | 2015/2/22 |
| Submitter | Kamaal,N., Akram,M., Pratap,A., Yadav,P., Naimuddin |
| Host | |
| Vector | |
| Download | Genome |GFF3 |PEP |CDS |
Genomic Organization
JBrowse
Genome
NC_018090
Gene Information
| NCBI Accession | YP_006491261.1 |
|---|---|
| Location | 126-485 |
| Gene Name | AV2 |
| Protein Name | precoat protein |
| Coding Region | ATGTGGGATCCACTTTTGCACGATTTCCCGGAGACTGTATTCGGGTTGAGATGTATGCTTGCGGTGAAGTACCTTCAGCTTGTTGAGCAGTCGTACTCTCCCGACACCCTCGGTTACGATCTTATTCGTGACCTTATATCCGTCGTTCGTGCTCGTAGGTATGCCGAAGCGACAAGCAGATATGCCAATTTCAGTGCCCGGATGGAAAGTACGCCGCCGGCTGAACTTCGACTCCCCCTACGCTGCCCGTGCAGTTGTCCCTATTGTAACCGGCATTTCAAAGTCAAGGGCGTGGGCCAACAGGCCGATGAACAGGAAGCCCAGGATCTATCGAATGTACAGAAGCCCGGATGTTCCTAA |
| Protein Sequence | MWDPLLHDFPETVFGLRCMLAVKYLQLVEQSYSPDTLGYDLIRDLISVVRARRYAEATSRYANFSARMESTPPAELRLPLRCPCSCPYCNRHFKVKGVGQQADEQEAQDLSNVQKPGCS |
| NCBI Accession | YP_006491262.1 |
|---|---|
| Location | 286-1059 |
| Gene Name | AV1 |
| Protein Name | capsid protein |
| Coding Region | ATGCCGAAGCGACAAGCAGATATGCCAATTTCAGTGCCCGGATGGAAAGTACGCCGCCGGCTGAACTTCGACTCCCCCTACGCTGCCCGTGCAGTTGTCCCTATTGTAACCGGCATTTCAAAGTCAAGGGCGTGGGCCAACAGGCCGATGAACAGGAAGCCCAGGATCTATCGAATGTACAGAAGCCCGGATGTTCCTAAGGGGTGTGAAGGTCCGTGTAAGGTCCAGTCATTTGAGTCTAGGCATGATGTCGTTCACATTGGTAAAGTTATGTGCATTAGTGATGTTACTAGGGGTACCGGTTTAACTCATAGGGTCGGTAAGCGTTTTTGTGTTAAGTCTGTTTACGTTCTGGGCAAGATATGGATGGATGAAAACATCAAGACCAAGAACCATACCAACAGCGTCATGTTCTTCCTTGTACGTGATCGTCGTCCAGTGGACAAGCCCCAGGATTTCGGCGAGGTATTCAACATGTTCGATAATGAGCCCAGTACGGCTACGGTTAAGAATATGCATCGTGACCGTTACCAGGTTCTTCGTAAGTGGCATGCCACGGTGACCGGTGGTCAGTACGCGTCCAAGGAGCAAGCTCTTGTCAAGAAATTTGTTAGGGTTAATAATTATGTTGTGTATAACCAGCAAGAAGCTGGCAAGTATGAGAATCATAGTGAGAATGCTTTGATGTTGTATATGGCATGTACTCATGCCTCTAACCCCGTGTATGCTACTCTAAAGATACGGATCTATTTCTACGATTCGGTCACAAATTAA |
| Protein Sequence | MPKRQADMPISVPGWKVRRRLNFDSPYAARAVVPIVTGISKSRAWANRPMNRKPRIYRMYRSPDVPKGCEGPCKVQSFESRHDVVHIGKVMCISDVTRGTGLTHRVGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPVDKPQDFGEVFNMFDNEPSTATVKNMHRDRYQVLRKWHATVTGGQYASKEQALVKKFVRVNNYVVYNQQEAGKYENHSENALMLYMACTHASNPVYATLKIRIYFYDSVTN |
| NCBI Accession | YP_006491263.1 |
|---|---|
| Location | 589-993 |
| Gene Name | AC5 |
| Protein Name | AC5 |
| Coding Region | ATGAGTACATGCCATATACAACATCAAAGCATTCTCACTATGATTCTCATACTTGCCAGCTTCTTGCTGGTTATACACAACATAATTATTAACCCTAACAAATTTCTTGACAAGAGCTTGCTCCTTGGACGCGTACTGACCACCGGTCACCGTGGCATGCCACTTACGAAGAACCTGGTAACGGTCACGATGCATATTCTTAACCGTAGCCGTACTGGGCTCATTATCGAACATGTTGAATACCTCGCCGAAATCCTGGGGCTTGTCCACTGGACGACGATCACGTACAAGGAAGAACATGACGCTGTTGGTATGGTTCTTGGTCTTGATGTTTTCATCCATCCATATCTTGCCCAGAACGTAAACAGACTTAACACAAAAACGCTTACCGACCCTATGAGTTAA |
| Protein Sequence | MSTCHIQHQSILTMILILASFLLVIHNIIINPNKFLDKSLLLGRVLTTGHRGMPLTKNLVTVTMHILNRSRTGLIIEHVEYLAEILGLVHWTTITYKEEHDAVGMVLGLDVFIHPYLAQNVNRLNTKTLTDPMS |
| NCBI Accession | YP_006491264.1 |
|---|---|
| Location | 1056-1460 |
| Gene Name | AC3 |
| Protein Name | replication enhancement protein ReP |
| Coding Region | ATGGATTTACGCACAGGGGAGTTCATCACTGCAGCTCAAGCCGAGAATGGCGCCTTTATCTGGACGGTTCCAAATCCCCTATATTTCAGGATGACAGACCACCACAGCAGGCCTTTCCTGTCGAACCACGACATAATAACGGCACGAATACAGTTCAACTACAACCTGAGGAAAGCATTGGGGATTCACCAATGTTTCCTAACCTTCCGCATCTGGACGAACTCACACCTTCAGATTGGTCGTTTCTTAAGGGTATTTAGAACACAAGTGTTGAAATATCTTGATAGTTTGGGTGTAATTAGTATCAACAATGTAATTAGAGCTGTGAATCATGTTTTATGGAATGTATTGACACAAACAGTTTATGTAGACAATTCAATGATAATAAAATTAAATCTTTATTAA |
| Protein Sequence | MDLRTGEFITAAQAENGAFIWTVPNPLYFRMTDHHSRPFLSNHDIITARIQFNYNLRKALGIHQCFLTFRIWTNSHLQIGRFLRVFRTQVLKYLDSLGVISINNVIRAVNHVLWNVLTQTVYVDNSMIIKLNLY |
| NCBI Accession | YP_006491265.1 |
|---|---|
| Location | 1201-1605 |
| Gene Name | AC2 |
| Protein Name | transcription activation protein TrAp |
| Coding Region | ATGCGATCTTCGTCACCCTCCAACGCCCACTCTACTCAGGTACCCATCAAAGTTCAGCACAGGATAGCGAAGAAGAAGTTCAGACGGAGGAGAGTGGACCTTGAATGCGGCTGCTCCTACTTCGTAGCAATTTCCTGCCACAACCATGGATTTACGCACAGGGGAGTTCATCACTGCAGCTCAAGCCGAGAATGGCGCCTTTATCTGGACGGTTCCAAATCCCCTATATTTCAGGATGACAGACCACCACAGCAGGCCTTTCCTGTCGAACCACGACATAATAACGGCACGAATACAGTTCAACTACAACCTGAGGAAAGCATTGGGGATTCACCAATGTTTCCTAACCTTCCGCATCTGGACGAACTCACACCTTCAGATTGGTCGTTTCTTAAGGGTATTTAG |
| Protein Sequence | MRSSSPSNAHSTQVPIKVQHRIAKKKFRRRRVDLECGCSYFVAISCHNHGFTHRGVHHCSSSREWRLYLDGSKSPIFQDDRPPQQAFPVEPRHNNGTNTVQLQPEESIGDSPMFPNLPHLDELTPSDWSFLKGI |
| NCBI Accession | YP_006491266.1 |
|---|---|
| Location | 1502-2590 |
| Gene Name | AC1 |
| Protein Name | replication associated protein Rep |
| Coding Region | ATGCCTCCCAAGAGATTCCAAATAAATGCGAAGAATTATTTTATAACTTATCCCAAATGCTCCCTCTCCAAAGAAGAAGCACTTTCCCAATTAAAAAACTTAGAAACCCCAACAAATAAAAAATTCATCAAGATCTGCAGAGAGCTTCACGAGAATGGGGAACCTCATCTACACGTGCTCATCCAGTTCGAGGGGAAATACAAGTGCCAGAATCAGCGATTCTTCGACTTGGTATCCCCGACCAGGTCAGCACATTTCCATCCGAACATTCAGGGAGCTAAATCCAGCTCCGACGTCAAGTCCTACATCGACAAGGACGGAGACACACTGGAGTGGGGAGACTTCCAGATCGACGGCAGATCTGCAAGAGGGGGCCAGCAGACAGCAAACGACGCTTACGCAGCAGCACTTAACGCGGGAAGCAAGTCGGAAGCTCTTAAAATACTTAGGGAGCTAGCCCCAAAAGATTATGTATTACAGTTCCATAATTTAAATGCAAATTTAGATAGAATTTTTGAGCCTCCCATGGAGGTTTATATTTCGCCTTTTTCTTCTTCTTCTTTTGATCGAGTCCCAGAAGAACTCGAAGAGTGGGCATGCGAGAACGTCGTTGATGCCGCTGCGCGGCCCTTGAGACCGGTGAGTATAGTAGTTGAAGGTGATAGTCGGACGGGGAAGACAATGTGGGCCAGGTCGTTGGGTCCACATAATTACTTATGTGGCCATTTAGATCTGAGTCCGAAAGTGTACAATAACGAAGCGTGGTACAACGTCATTGATGACGTAGACCCGCACTATCTAAAGCACTTTAAAGAATTCATGGGGGCCCAAAGGGACTGGCAATCAAACACAAAGTACGGAAAGCCAGTTCAAATTAAAGGCGGCATCCCAACAATCTTCCTCTGCAATCCAGGGCCCAATTCAAGTTATAAAGAGTACCTAGAAGAGGAAAAGAACAGCGCACTAAGGACTTGGGCCCAAAGAAATGCGATCTTCGTCACCCTCCAACGCCCACTCTACTCAGGTACCCATCAAAGTTCAGCACAGGATAGCGAAGAAGAAGTTCAGACGGAGGAGAGTGGACCTTGA |
| Protein Sequence | MPPKRFQINAKNYFITYPKCSLSKEEALSQLKNLETPTNKKFIKICRELHENGEPHLHVLIQFEGKYKCQNQRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYIDKDGDTLEWGDFQIDGRSARGGQQTANDAYAAALNAGSKSEALKILRELAPKDYVLQFHNLNANLDRIFEPPMEVYISPFSSSSFDRVPEELEEWACENVVDAAARPLRPVSIVVEGDSRTGKTMWARSLGPHNYLCGHLDLSPKVYNNEAWYNVIDDVDPHYLKHFKEFMGAQRDWQSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEYLEEEKNSALRTWAQRNAIFVTLQRPLYSGTHQSSAQDSEEEVQTEESGP |
| NCBI Accession | YP_006491267.1 |
|---|---|
| Location | 2134-2436 |
| Gene Name | AC4 |
| Protein Name | AC4 protein |
| Coding Region | ATGGGGAACCTCATCTACACGTGCTCATCCAGTTCGAGGGGAAATACAAGTGCCAGAATCAGCGATTCTTCGACTTGGTATCCCCGACCAGGTCAGCACATTTCCATCCGAACATTCAGGGAGCTAAATCCAGCTCCGACGTCAAGTCCTACATCGACAAGGACGGAGACACACTGGAGTGGGGAGACTTCCAGATCGACGGCAGATCTGCAAGAGGGGGCCAGCAGACAGCAAACGACGCTTACGCAGCAGCACTTAACGCGGGAAGCAAGTCGGAAGCTCTTAAAATACTTAGGGAGCTAG |
| Protein Sequence | MGNLIYTCSSSSRGNTSARISDSSTWYPRPGQHISIRTFRELNPAPTSSPTSTRTETHWSGETSRSTADLQEGASRQQTTLTQQHLTREASRKLLKYLGS |
References More References in PubMed
| 1 |
First Report of Tomato yellow leaf curl virus Infecting Common Bean in China. Ji YH, et al. Plant Dis. 2012 Aug;96(8):1229. doi: 10.1094/PDIS-03-12-0258-PDN. PMID: 30727082 |
|---|---|
| 2 |
First Report of Tomato yellow leaf curl virus Infecting Common Bean (Phaseolus vulgaris) in Greece. Papayiannis LC, et al. Plant Dis. 2007 Apr;91(4):465. doi: 10.1094/PDIS-91-4-0465C. PMID: 30781210 |
| 3 |
Díaz-Pendón JA, et al. Mol Plant Pathol. 2010 Jul;11(4):441-50. doi: 10.1111/j.1364-3703.2010.00618.x. PMID: 20618703 |
| 4 |
Senna leaf curl virus: a novel begomovirus identified in Senna occidentalis. Kumar J, et al. Arch Virol. 2016 Sep;161(9):2609-12. doi: 10.1007/s00705-016-2931-7. Epub 2016 Jun 17. PMID: 27314944 |
| 5 |
Seed Transmission of Tomato yellow leaf curl virus in White Soybean (Glycine max). Kil EJ, et al. Plant Pathol J. 2017 Aug;33(4):424-428. doi: 10.5423/PPJ.NT.02.2017.0043. Epub 2017 Aug 1. PMID: 28811759 |
| 6 |
Navas-Castillo J, et al. Plant Dis. 1999 Jan;83(1):29-32. doi: 10.1094/PDIS.1999.83.1.29. PMID: 30845435 |
| 7 |
Kamaal N, et al. Virus Genes. 2013 Feb;46(1):120-7. doi: 10.1007/s11262-012-0832-8. Epub 2012 Oct 10. PMID: 23054434 |
| 8 |
Screening Common Bean (Phaseolus vulgaris) for Resistance to Tomato yellow leaf curl virus. Lapidot M. Plant Dis. 2002 Apr;86(4):429-432. doi: 10.1094/PDIS.2002.86.4.429. PMID: 30818720 |
| 9 |
Interactions between Common Bean Viruses and Their Whitefly Vector. Ferreira AL, et al. Viruses. 2024 Oct 2;16(10):1567. doi: 10.3390/v16101567. PMID: 39459901 |
| 10 |
Identification of Tomato yellow leaf curl virus Naturally Infecting Common Bean in Japan. Shahid MS, et al. Plant Dis. 2014 Oct;98(10):1447. doi: 10.1094/PDIS-03-14-0316-PDN. PMID: 30703986 |