French bean leaf curl virus

Basic Information

Genus Begomovirus
NCBI Assembly GCF_000899775.1
Isolate India
Release date 2015/2/22
Submitter Kamaal,N., Akram,M., Pratap,A., Yadav,P., Naimuddin
Host
Vector
Download Genome |GFF3 |PEP |CDS

Genomic Organization

JBrowse

Genome

NC_018090
ACCGGATGGCCGCGCGATTTTTTTGTGGTCCCCATCCACTTATCAACCAATCACATGTCTCCCTCAAAGTTAAATAACGCTCCCGCCCACTATAAGTACTTAGTCACCAAGTTTTAGTTTGCACCATGTGGGATCCACTTTTGCACGATTTCCCGGAGACTGTATTCGGGTTGAGATGTATGCTTGCGGTGAAGTACCTTCAGCTTGTTGAGCAGTCGTACTCTCCCGACACCCTCGGTTACGATCTTATTCGTGACCTTATATCCGTCGTTCGTGCTCGTAGGTATGCCGAAGCGACAAGCAGATATGCCAATTTCAGTGCCCGGATGGAAAGTACGCCGCCGGCTGAACTTCGACTCCCCCTACGCTGCCCGTGCAGTTGTCCCTATTGTAACCGGCATTTCAAAGTCAAGGGCGTGGGCCAACAGGCCGATGAACAGGAAGCCCAGGATCTATCGAATGTACAGAAGCCCGGATGTTCCTAAGGGGTGTGAAGGTCCGTGTAAGGTCCAGTCATTTGAGTCTAGGCATGATGTCGTTCACATTGGTAAAGTTATGTGCATTAGTGATGTTACTAGGGGTACCGGTTTAACTCATAGGGTCGGTAAGCGTTTTTGTGTTAAGTCTGTTTACGTTCTGGGCAAGATATGGATGGATGAAAACATCAAGACCAAGAACCATACCAACAGCGTCATGTTCTTCCTTGTACGTGATCGTCGTCCAGTGGACAAGCCCCAGGATTTCGGCGAGGTATTCAACATGTTCGATAATGAGCCCAGTACGGCTACGGTTAAGAATATGCATCGTGACCGTTACCAGGTTCTTCGTAAGTGGCATGCCACGGTGACCGGTGGTCAGTACGCGTCCAAGGAGCAAGCTCTTGTCAAGAAATTTGTTAGGGTTAATAATTATGTTGTGTATAACCAGCAAGAAGCTGGCAAGTATGAGAATCATAGTGAGAATGCTTTGATGTTGTATATGGCATGTACTCATGCCTCTAACCCCGTGTATGCTACTCTAAAGATACGGATCTATTTCTACGATTCGGTCACAAATTAATAAAGATTTAATTTTATTATCATTGAATTGTCTACATAAACTGTTTGTGTCAATACATTCCATAAAACATGATTCACAGCTCTAATTACATTGTTGATACTAATTACACCCAAACTATCAAGATATTTCAACACTTGTGTTCTAAATACCCTTAAGAAACGACCAATCTGAAGGTGTGAGTTCGTCCAGATGCGGAAGGTTAGGAAACATTGGTGAATCCCCAATGCTTTCCTCAGGTTGTAGTTGAACTGTATTCGTGCCGTTATTATGTCGTGGTTCGACAGGAAAGGCCTGCTGTGGTGGTCTGTCATCCTGAAATATAGGGGATTTGGAACCGTCCAGATAAAGGCGCCATTCTCGGCTTGAGCTGCAGTGATGAACTCCCCTGTGCGTAAATCCATGGTTGTGGCAGGAAATTGCTACGAAGTAGGAGCAGCCGCATTCAAGGTCCACTCTCCTCCGTCTGAACTTCTTCTTCGCTATCCTGTGCTGAACTTTGATGGGTACCTGAGTAGAGTGGGCGTTGGAGGGTGACGAAGATCGCATTTCTTTGGGCCCAAGTCCTTAGTGCGCTGTTCTTTTCCTCTTCTAGGTACTCTTTATAACTTGAATTGGGCCCTGGATTGCAGAGGAAGATTGTTGGGATGCCGCCTTTAATTTGAACTGGCTTTCCGTACTTTGTGTTTGATTGCCAGTCCCTTTGGGCCCCCATGAATTCTTTAAAGTGCTTTAGATAGTGCGGGTCTACGTCATCAATGACGTTGTACCACGCTTCGTTATTGTACACTTTCGGACTCAGATCTAAATGGCCACATAAGTAATTATGTGGACCCAACGACCTGGCCCACATTGTCTTCCCCGTCCGACTATCACCTTCAACTACTATACTCACCGGTCTCAAGGGCCGCGCAGCGGCATCAACGACGTTCTCGCATGCCCACTCTTCGAGTTCTTCTGGGACTCGATCAAAAGAAGAAGAAGAAAAAGGCGAAATATAAACCTCCATGGGAGGCTCAAAAATTCTATCTAAATTTGCATTTAAATTATGGAACTGTAATACATAATCTTTTGGGGCTAGCTCCCTAAGTATTTTAAGAGCTTCCGACTTGCTTCCCGCGTTAAGTGCTGCTGCGTAAGCGTCGTTTGCTGTCTGCTGGCCCCCTCTTGCAGATCTGCCGTCGATCTGGAAGTCTCCCCACTCCAGTGTGTCTCCGTCCTTGTCGATGTAGGACTTGACGTCGGAGCTGGATTTAGCTCCCTGAATGTTCGGATGGAAATGTGCTGACCTGGTCGGGGATACCAAGTCGAAGAATCGCTGATTCTGGCACTTGTATTTCCCCTCGAACTGGATGAGCACGTGTAGATGAGGTTCCCCATTCTCGTGAAGCTCTCTGCAGATCTTGATGAATTTTTTATTTGTTGGGGTTTCTAAGTTTTTTAATTGGGAAAGTGCTTCTTCTTTGGAGAGGGAGCATTTGGGATAAGTTATAAAATAATTCTTCGCATTTATTTGGAATCTCTTGGGAGGCATGTTGACTAAATTGAGTACCGATTGACCCTCTCTGGCAACTCTCTCTAGTAAATGGGTACTCATTATATAGTGAGTACCAAATGGCACTCTCGTAATTTTTGAGTGAAACTCAAAAATCTCACGCTCCAAAAGCGGCCATCCGTATAATATT

Gene Information

NCBI Accession YP_006491261.1
Location 126-485
Gene Name AV2
Protein Name precoat protein
Coding Region ATGTGGGATCCACTTTTGCACGATTTCCCGGAGACTGTATTCGGGTTGAGATGTATGCTTGCGGTGAAGTACCTTCAGCTTGTTGAGCAGTCGTACTCTCCCGACACCCTCGGTTACGATCTTATTCGTGACCTTATATCCGTCGTTCGTGCTCGTAGGTATGCCGAAGCGACAAGCAGATATGCCAATTTCAGTGCCCGGATGGAAAGTACGCCGCCGGCTGAACTTCGACTCCCCCTACGCTGCCCGTGCAGTTGTCCCTATTGTAACCGGCATTTCAAAGTCAAGGGCGTGGGCCAACAGGCCGATGAACAGGAAGCCCAGGATCTATCGAATGTACAGAAGCCCGGATGTTCCTAA
Protein Sequence MWDPLLHDFPETVFGLRCMLAVKYLQLVEQSYSPDTLGYDLIRDLISVVRARRYAEATSRYANFSARMESTPPAELRLPLRCPCSCPYCNRHFKVKGVGQQADEQEAQDLSNVQKPGCS

NCBI Accession YP_006491262.1
Location 286-1059
Gene Name AV1
Protein Name capsid protein
Coding Region ATGCCGAAGCGACAAGCAGATATGCCAATTTCAGTGCCCGGATGGAAAGTACGCCGCCGGCTGAACTTCGACTCCCCCTACGCTGCCCGTGCAGTTGTCCCTATTGTAACCGGCATTTCAAAGTCAAGGGCGTGGGCCAACAGGCCGATGAACAGGAAGCCCAGGATCTATCGAATGTACAGAAGCCCGGATGTTCCTAAGGGGTGTGAAGGTCCGTGTAAGGTCCAGTCATTTGAGTCTAGGCATGATGTCGTTCACATTGGTAAAGTTATGTGCATTAGTGATGTTACTAGGGGTACCGGTTTAACTCATAGGGTCGGTAAGCGTTTTTGTGTTAAGTCTGTTTACGTTCTGGGCAAGATATGGATGGATGAAAACATCAAGACCAAGAACCATACCAACAGCGTCATGTTCTTCCTTGTACGTGATCGTCGTCCAGTGGACAAGCCCCAGGATTTCGGCGAGGTATTCAACATGTTCGATAATGAGCCCAGTACGGCTACGGTTAAGAATATGCATCGTGACCGTTACCAGGTTCTTCGTAAGTGGCATGCCACGGTGACCGGTGGTCAGTACGCGTCCAAGGAGCAAGCTCTTGTCAAGAAATTTGTTAGGGTTAATAATTATGTTGTGTATAACCAGCAAGAAGCTGGCAAGTATGAGAATCATAGTGAGAATGCTTTGATGTTGTATATGGCATGTACTCATGCCTCTAACCCCGTGTATGCTACTCTAAAGATACGGATCTATTTCTACGATTCGGTCACAAATTAA
Protein Sequence MPKRQADMPISVPGWKVRRRLNFDSPYAARAVVPIVTGISKSRAWANRPMNRKPRIYRMYRSPDVPKGCEGPCKVQSFESRHDVVHIGKVMCISDVTRGTGLTHRVGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPVDKPQDFGEVFNMFDNEPSTATVKNMHRDRYQVLRKWHATVTGGQYASKEQALVKKFVRVNNYVVYNQQEAGKYENHSENALMLYMACTHASNPVYATLKIRIYFYDSVTN

NCBI Accession YP_006491263.1
Location 589-993
Gene Name AC5
Protein Name AC5
Coding Region ATGAGTACATGCCATATACAACATCAAAGCATTCTCACTATGATTCTCATACTTGCCAGCTTCTTGCTGGTTATACACAACATAATTATTAACCCTAACAAATTTCTTGACAAGAGCTTGCTCCTTGGACGCGTACTGACCACCGGTCACCGTGGCATGCCACTTACGAAGAACCTGGTAACGGTCACGATGCATATTCTTAACCGTAGCCGTACTGGGCTCATTATCGAACATGTTGAATACCTCGCCGAAATCCTGGGGCTTGTCCACTGGACGACGATCACGTACAAGGAAGAACATGACGCTGTTGGTATGGTTCTTGGTCTTGATGTTTTCATCCATCCATATCTTGCCCAGAACGTAAACAGACTTAACACAAAAACGCTTACCGACCCTATGAGTTAA
Protein Sequence MSTCHIQHQSILTMILILASFLLVIHNIIINPNKFLDKSLLLGRVLTTGHRGMPLTKNLVTVTMHILNRSRTGLIIEHVEYLAEILGLVHWTTITYKEEHDAVGMVLGLDVFIHPYLAQNVNRLNTKTLTDPMS

NCBI Accession YP_006491264.1
Location 1056-1460
Gene Name AC3
Protein Name replication enhancement protein ReP
Coding Region ATGGATTTACGCACAGGGGAGTTCATCACTGCAGCTCAAGCCGAGAATGGCGCCTTTATCTGGACGGTTCCAAATCCCCTATATTTCAGGATGACAGACCACCACAGCAGGCCTTTCCTGTCGAACCACGACATAATAACGGCACGAATACAGTTCAACTACAACCTGAGGAAAGCATTGGGGATTCACCAATGTTTCCTAACCTTCCGCATCTGGACGAACTCACACCTTCAGATTGGTCGTTTCTTAAGGGTATTTAGAACACAAGTGTTGAAATATCTTGATAGTTTGGGTGTAATTAGTATCAACAATGTAATTAGAGCTGTGAATCATGTTTTATGGAATGTATTGACACAAACAGTTTATGTAGACAATTCAATGATAATAAAATTAAATCTTTATTAA
Protein Sequence MDLRTGEFITAAQAENGAFIWTVPNPLYFRMTDHHSRPFLSNHDIITARIQFNYNLRKALGIHQCFLTFRIWTNSHLQIGRFLRVFRTQVLKYLDSLGVISINNVIRAVNHVLWNVLTQTVYVDNSMIIKLNLY

NCBI Accession YP_006491265.1
Location 1201-1605
Gene Name AC2
Protein Name transcription activation protein TrAp
Coding Region ATGCGATCTTCGTCACCCTCCAACGCCCACTCTACTCAGGTACCCATCAAAGTTCAGCACAGGATAGCGAAGAAGAAGTTCAGACGGAGGAGAGTGGACCTTGAATGCGGCTGCTCCTACTTCGTAGCAATTTCCTGCCACAACCATGGATTTACGCACAGGGGAGTTCATCACTGCAGCTCAAGCCGAGAATGGCGCCTTTATCTGGACGGTTCCAAATCCCCTATATTTCAGGATGACAGACCACCACAGCAGGCCTTTCCTGTCGAACCACGACATAATAACGGCACGAATACAGTTCAACTACAACCTGAGGAAAGCATTGGGGATTCACCAATGTTTCCTAACCTTCCGCATCTGGACGAACTCACACCTTCAGATTGGTCGTTTCTTAAGGGTATTTAG
Protein Sequence MRSSSPSNAHSTQVPIKVQHRIAKKKFRRRRVDLECGCSYFVAISCHNHGFTHRGVHHCSSSREWRLYLDGSKSPIFQDDRPPQQAFPVEPRHNNGTNTVQLQPEESIGDSPMFPNLPHLDELTPSDWSFLKGI

NCBI Accession YP_006491266.1
Location 1502-2590
Gene Name AC1
Protein Name replication associated protein Rep
Coding Region ATGCCTCCCAAGAGATTCCAAATAAATGCGAAGAATTATTTTATAACTTATCCCAAATGCTCCCTCTCCAAAGAAGAAGCACTTTCCCAATTAAAAAACTTAGAAACCCCAACAAATAAAAAATTCATCAAGATCTGCAGAGAGCTTCACGAGAATGGGGAACCTCATCTACACGTGCTCATCCAGTTCGAGGGGAAATACAAGTGCCAGAATCAGCGATTCTTCGACTTGGTATCCCCGACCAGGTCAGCACATTTCCATCCGAACATTCAGGGAGCTAAATCCAGCTCCGACGTCAAGTCCTACATCGACAAGGACGGAGACACACTGGAGTGGGGAGACTTCCAGATCGACGGCAGATCTGCAAGAGGGGGCCAGCAGACAGCAAACGACGCTTACGCAGCAGCACTTAACGCGGGAAGCAAGTCGGAAGCTCTTAAAATACTTAGGGAGCTAGCCCCAAAAGATTATGTATTACAGTTCCATAATTTAAATGCAAATTTAGATAGAATTTTTGAGCCTCCCATGGAGGTTTATATTTCGCCTTTTTCTTCTTCTTCTTTTGATCGAGTCCCAGAAGAACTCGAAGAGTGGGCATGCGAGAACGTCGTTGATGCCGCTGCGCGGCCCTTGAGACCGGTGAGTATAGTAGTTGAAGGTGATAGTCGGACGGGGAAGACAATGTGGGCCAGGTCGTTGGGTCCACATAATTACTTATGTGGCCATTTAGATCTGAGTCCGAAAGTGTACAATAACGAAGCGTGGTACAACGTCATTGATGACGTAGACCCGCACTATCTAAAGCACTTTAAAGAATTCATGGGGGCCCAAAGGGACTGGCAATCAAACACAAAGTACGGAAAGCCAGTTCAAATTAAAGGCGGCATCCCAACAATCTTCCTCTGCAATCCAGGGCCCAATTCAAGTTATAAAGAGTACCTAGAAGAGGAAAAGAACAGCGCACTAAGGACTTGGGCCCAAAGAAATGCGATCTTCGTCACCCTCCAACGCCCACTCTACTCAGGTACCCATCAAAGTTCAGCACAGGATAGCGAAGAAGAAGTTCAGACGGAGGAGAGTGGACCTTGA
Protein Sequence MPPKRFQINAKNYFITYPKCSLSKEEALSQLKNLETPTNKKFIKICRELHENGEPHLHVLIQFEGKYKCQNQRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYIDKDGDTLEWGDFQIDGRSARGGQQTANDAYAAALNAGSKSEALKILRELAPKDYVLQFHNLNANLDRIFEPPMEVYISPFSSSSFDRVPEELEEWACENVVDAAARPLRPVSIVVEGDSRTGKTMWARSLGPHNYLCGHLDLSPKVYNNEAWYNVIDDVDPHYLKHFKEFMGAQRDWQSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEYLEEEKNSALRTWAQRNAIFVTLQRPLYSGTHQSSAQDSEEEVQTEESGP

NCBI Accession YP_006491267.1
Location 2134-2436
Gene Name AC4
Protein Name AC4 protein
Coding Region ATGGGGAACCTCATCTACACGTGCTCATCCAGTTCGAGGGGAAATACAAGTGCCAGAATCAGCGATTCTTCGACTTGGTATCCCCGACCAGGTCAGCACATTTCCATCCGAACATTCAGGGAGCTAAATCCAGCTCCGACGTCAAGTCCTACATCGACAAGGACGGAGACACACTGGAGTGGGGAGACTTCCAGATCGACGGCAGATCTGCAAGAGGGGGCCAGCAGACAGCAAACGACGCTTACGCAGCAGCACTTAACGCGGGAAGCAAGTCGGAAGCTCTTAAAATACTTAGGGAGCTAG
Protein Sequence MGNLIYTCSSSSRGNTSARISDSSTWYPRPGQHISIRTFRELNPAPTSSPTSTRTETHWSGETSRSTADLQEGASRQQTTLTQQHLTREASRKLLKYLGS

References More References in PubMed

1

First Report of Tomato yellow leaf curl virus Infecting Common Bean in China.

Ji YH, et al.  Plant Dis. 2012 Aug;96(8):1229. doi: 10.1094/PDIS-03-12-0258-PDN.

PMID: 30727082
2

First Report of Tomato yellow leaf curl virus Infecting Common Bean (Phaseolus vulgaris) in Greece.

Papayiannis LC, et al.  Plant Dis. 2007 Apr;91(4):465. doi: 10.1094/PDIS-91-4-0465C.

PMID: 30781210
3

Senna leaf curl virus: a novel begomovirus identified in Senna occidentalis.

Kumar J, et al.  Arch Virol. 2016 Sep;161(9):2609-12. doi: 10.1007/s00705-016-2931-7. Epub 2016 Jun 17.

PMID: 27314944
4

Identification of Tomato yellow leaf curl virus Naturally Infecting Common Bean in Japan.

Shahid MS, et al.  Plant Dis. 2014 Oct;98(10):1447. doi: 10.1094/PDIS-03-14-0316-PDN.

PMID: 30703986
5

Characterization of a new begomovirus and a beta satellite associated with the leaf curl disease of French bean in northern India.

Kamaal N, et al.  Virus Genes. 2013 Feb;46(1):120-7. doi: 10.1007/s11262-012-0832-8. Epub 2012 Oct 10.

PMID: 23054434
6

Seed Transmission of Tomato yellow leaf curl virus in White Soybean (Glycine max).

Kil EJ, et al.  Plant Pathol J. 2017 Aug;33(4):424-428. doi: 10.5423/PPJ.NT.02.2017.0043. Epub 2017 Aug 1.

PMID: 28811759
7

Tomato yellow leaf curl viruses: ménage à trois between the virus complex, the plant and the whitefly vector.

Díaz-Pendón JA, et al.  Mol Plant Pathol. 2010 Jul;11(4):441-50. doi: 10.1111/j.1364-3703.2010.00618.x.

PMID: 20618703
8

Tomato Yellow Leaf Curl Virus-Is Causes a Novel Disease of Common Bean and Severe Epidemics in Tomato in Spain.

Navas-Castillo J, et al.  Plant Dis. 1999 Jan;83(1):29-32. doi: 10.1094/PDIS.1999.83.1.29.

PMID: 30845435
9

Identification of Tomato Yellow Leaf Curl Virus-IR and Associated Tomato Leaf Curl Betasatellite Infecting Common Bean (Phaseolus vulgaris) in Oman.

Shahid MS, et al.  Plant Dis. 2018 Sep;102(9):1864. doi: 10.1094/PDIS-02-18-0327-PDN. Epub 2018 Jul 6.

PMID: 30125170
10

Comprehensive Surveys of Bean common mosaic virus and Bean common mosaic necrosis virus and Molecular Evidence for Occurrence of Other Phaseolus vulgaris Viruses in Tanzania.

Mwaipopo B, et al.  Plant Dis. 2018 Nov;102(11):2361-2370. doi: 10.1094/PDIS-01-18-0198-RE. Epub 2018 Sep 19.

PMID: 30252625