Euphorbia yellow leaf curl virus

Basic Information

Genus Begomovirus
NCBI Assembly GCF_003029205.1
Isolate Pakistan
Release date 2018/8/26
Submitter Riaz,H., Ashfaq,M.
Host
Vector
Download Genome |GFF3 |PEP |CDS

Genomic Organization

JBrowse

Genome

NC_038976
ACCGGATGGCCGCGTTTTTTTTTGTGGCCCCCAGAAAGCACTAACTGACAATGACATGTGGACCAATGAGAATCCTTTCTCATAGCCTGATTATTTCATGGTCCCCCCTATAACTTAGTGCGCAAGTATGTGGGATCCATTAGTAAACGAGTTTCCCGAAACCGTTCACGGTTTTCGATGTATGTTGGCAGTGAAATATCTCCAACTAGTTGCGGATACGTATTCCCCAGATACGGTGGGATACGATTTAATACGTGATTTAATTTGTATTCTACGTTCCAGGAATTATGTCGAAGCGCAAAGCAGATATAATCATTTCCACCCCAGGCTCGAAGGTTCGACGGAGGCTGAACTTCGACAGTCCAGGATCGAGCCGTGCTTATGTCCCTACTGTCCGCGTCACCAAATCAAGTCTATGGGCCAACAGACCCATGAACAGAAAGCCCAGGATGTACAGGATGTACAGAAGTCCAGATGTCCCTAGAGGATGTGAAGGCCCATGTAAGGTCCAGTCGTTTGAGTCCAGACATGATATTCAGCATATAGGTAAAGTTATGTGTGTCAGTGATGTTACGCGTGGAACTGGGCTGACCCATCGAGTGGGTAAAAGGTTTTGTGTTAAATCTGTTTATGTATTGGGCAAGATCTGGATGGACGAGAATATTAAGACCAAAAATCACACGAATAGTGTGATGTTTTTTTTAGTTAGGGATCGTAGACCCGTTGACAAGCCTCAAGATTTTGGTGAGGTTTTTAACATGTTTGATAATGAGCCCAGCACCGCGACTGTGAAGAATGTTCATCGTGATAGATACCAGGTATTAAGGAAGTGGCATGCAACTGTGACTGGTGGACAATATGCATCGAAGGAGCAGGCTCTCGTGAAGAAGTTTATTAGGGTTAATAATTATGTTGTGTACAACCAGCAAGAGGCTGGCAAGTATGAGAATCATTCTGAGAATGCGTTGATGTTGTATATGGCGTGTACGCACGCTTCTAATCCTGTGTATGCTACATTAAAGATACGGATCTACTTCTACGATTCAGTATCGAATTAATAAAGATTGAATTTTATTGAAGATGATTGTTCTACATATACAACATGATGTAATACATCCCATAATACATGATCAACTGCTCTAATGACATTGTTAATACTGATAACTCCTAAATTATCTAAATACTTAATAACTTGGGTCTTAAAGACCCTTAAGAAATGACCAGTCGGAGGCTGTGAGGTCGTCCAGATTCGGAAGGCTAGGAAACATTTGTGAATCCCCAGTGCTTTCCTCAGGTTGTGATTGAACTGTATCTGGACGGTGATGATGTCTTGGTTCATGAGAAATGGCCGGTTGTGGTGCTCTAAGATCTTGAAATAGAGGGGATTTTGAATCTTCCAGATATACACGCCATTCACTGCTTGAGCTGCAGTGATGGGTTCCCCGGTGCGTGAATCCATGGTTGTGGCAGTTGATGTGTACGTAGTATGAGCACCCACAGTTTAGATCAACCCTCTTACGCCGGATGGCTCTACGCTTAGCAGCTCTGTGTTGGACCTTGATTGGTACCTGAGTAGAGTGGGCTCTCGAGGGTGATGAATGTCGCATTCTTTAAAGCCCAATTTTTCAGTGCAGAATTCTTCTCTTCGTCCAAGAACTCTTTATAGCTTGAGTTGGGTCCTGGATTGCAGAGGAAGATAGTGGGAATGCCGCCTTTAATTTGAACTGGCTTTCCGTATTTCGTGTTGCTTTGCCAGTCCCTTTGGGCCCCCATGAATTCTTTAAAGTGCTTTAGGTAGTGGGGATCTACGTCATCAATCACGTTGTACCAGGCCTCGTTGCTGTAAACCTTAGGACTAAGGTCTAGATGACCACACAGGTAATTATGTGGACCCAAAGACCTAGCCCACATGGTCTTCCCCGTACGACTATCACCCTCTATGACAATACTTTTGGGTCTCAAAGGCCGCGCAGCGGCACCCATCACATTTTCAGACGCCCATTCCTCTATGGGCTGTGGAACTTGATCGAAGGAAGAAGAAGTAAAAGGAGAAACATAAACCTCCAGAGGAGGTGTGAAAATCCTATCTAAATTGGCATTTAAATTATGAAATTGTAATACATAATCCTTTGGAGCTAACTCCTTAATGACTCTGAGAGCCTCTGACTTACTGCCTGTGTTAAGCGCTGCGGCGTAAGCGTCGTTGGCCGTCTGTTGACCTCCTCTAGCAGATCGTCCGTCGATCTGAAACTCTCCCCATTCGAGGGTATCTCCGTCCTTCTCCAGATAGGACTTGACGTCCGAGCTTGATTTAGCTCCCTGAATGTTCGGATGGAAATGTGCTGACCTGGTTGGGGATACCAGGTCGAAGAATCTGTTATTCGTGCACTGGTACTTCCCTTCGAACTGGATGAGCACGTGAAGATGAGGTTCCCCATTTTCGTGGAGCTCTCTGCAGATCTTTATGTATTTTTTGTTTACTGGGGTTTGTAGGTTTTCTAATTGTGAGAGTGCTTCTTCTTTAGTGAGAGAGCATTTGGGATAAGTGAGGAAATAGTTTTTTGCATTTAACCTAAAAGCACGTGGCATTTTGGCAATCGGTGTACAAGCTAATTCTCTGCCAATCGGTGTATTGGGGTACAATATATAGGTGTACACCAAATGGCATTATTGTAATTTGGGAAAGAAATTCAAAAGATACACGCTCCAAAGCGGCCATCCGTCTAATATT

Gene Information

NCBI Accession YP_009508357.1
Location 128-484
Protein Name movement protein
Coding Region ATGTGGGATCCATTAGTAAACGAGTTTCCCGAAACCGTTCACGGTTTTCGATGTATGTTGGCAGTGAAATATCTCCAACTAGTTGCGGATACGTATTCCCCAGATACGGTGGGATACGATTTAATACGTGATTTAATTTGTATTCTACGTTCCAGGAATTATGTCGAAGCGCAAAGCAGATATAATCATTTCCACCCCAGGCTCGAAGGTTCGACGGAGGCTGAACTTCGACAGTCCAGGATCGAGCCGTGCTTATGTCCCTACTGTCCGCGTCACCAAATCAAGTCTATGGGCCAACAGACCCATGAACAGAAAGCCCAGGATGTACAGGATGTACAGAAGTCCAGATGTCCCTAG
Protein Sequence MWDPLVNEFPETVHGFRCMLAVKYLQLVADTYSPDTVGYDLIRDLICILRSRNYVEAQSRYNHFHPRLEGSTEAELRQSRIEPCLCPYCPRHQIKSMGQQTHEQKAQDVQDVQKSRCP

NCBI Accession YP_009508358.1
Location 288-1058
Protein Name coat protein
Coding Region ATGTCGAAGCGCAAAGCAGATATAATCATTTCCACCCCAGGCTCGAAGGTTCGACGGAGGCTGAACTTCGACAGTCCAGGATCGAGCCGTGCTTATGTCCCTACTGTCCGCGTCACCAAATCAAGTCTATGGGCCAACAGACCCATGAACAGAAAGCCCAGGATGTACAGGATGTACAGAAGTCCAGATGTCCCTAGAGGATGTGAAGGCCCATGTAAGGTCCAGTCGTTTGAGTCCAGACATGATATTCAGCATATAGGTAAAGTTATGTGTGTCAGTGATGTTACGCGTGGAACTGGGCTGACCCATCGAGTGGGTAAAAGGTTTTGTGTTAAATCTGTTTATGTATTGGGCAAGATCTGGATGGACGAGAATATTAAGACCAAAAATCACACGAATAGTGTGATGTTTTTTTTAGTTAGGGATCGTAGACCCGTTGACAAGCCTCAAGATTTTGGTGAGGTTTTTAACATGTTTGATAATGAGCCCAGCACCGCGACTGTGAAGAATGTTCATCGTGATAGATACCAGGTATTAAGGAAGTGGCATGCAACTGTGACTGGTGGACAATATGCATCGAAGGAGCAGGCTCTCGTGAAGAAGTTTATTAGGGTTAATAATTATGTTGTGTACAACCAGCAAGAGGCTGGCAAGTATGAGAATCATTCTGAGAATGCGTTGATGTTGTATATGGCGTGTACGCACGCTTCTAATCCTGTGTATGCTACATTAAAGATACGGATCTACTTCTACGATTCAGTATCGAATTAA
Protein Sequence MSKRKADIIISTPGSKVRRRLNFDSPGSSRAYVPTVRVTKSSLWANRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDIQHIGKVMCVSDVTRGTGLTHRVGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPVDKPQDFGEVFNMFDNEPSTATVKNVHRDRYQVLRKWHATVTGGQYASKEQALVKKFIRVNNYVVYNQQEAGKYENHSENALMLYMACTHASNPVYATLKIRIYFYDSVSN

NCBI Accession YP_009508359.1
Location 1055-1459
Protein Name replication enhancer protein
Coding Region ATGGATTCACGCACCGGGGAACCCATCACTGCAGCTCAAGCAGTGAATGGCGTGTATATCTGGAAGATTCAAAATCCCCTCTATTTCAAGATCTTAGAGCACCACAACCGGCCATTTCTCATGAACCAAGACATCATCACCGTCCAGATACAGTTCAATCACAACCTGAGGAAAGCACTGGGGATTCACAAATGTTTCCTAGCCTTCCGAATCTGGACGACCTCACAGCCTCCGACTGGTCATTTCTTAAGGGTCTTTAAGACCCAAGTTATTAAGTATTTAGATAATTTAGGAGTTATCAGTATTAACAATGTCATTAGAGCAGTTGATCATGTATTATGGGATGTATTACATCATGTTGTATATGTAGAACAATCATCTTCAATAAAATTCAATCTTTATTAA
Protein Sequence MDSRTGEPITAAQAVNGVYIWKIQNPLYFKILEHHNRPFLMNQDIITVQIQFNHNLRKALGIHKCFLAFRIWTTSQPPTGHFLRVFKTQVIKYLDNLGVISINNVIRAVDHVLWDVLHHVVYVEQSSSIKFNLY

NCBI Accession YP_009508360.1
Location 1200-1607
Protein Name transcriptional activator protein
Coding Region ATGCGACATTCATCACCCTCGAGAGCCCACTCTACTCAGGTACCAATCAAGGTCCAACACAGAGCTGCTAAGCGTAGAGCCATCCGGCGTAAGAGGGTTGATCTAAACTGTGGGTGCTCATACTACGTACACATCAACTGCCACAACCATGGATTCACGCACCGGGGAACCCATCACTGCAGCTCAAGCAGTGAATGGCGTGTATATCTGGAAGATTCAAAATCCCCTCTATTTCAAGATCTTAGAGCACCACAACCGGCCATTTCTCATGAACCAAGACATCATCACCGTCCAGATACAGTTCAATCACAACCTGAGGAAAGCACTGGGGATTCACAAATGTTTCCTAGCCTTCCGAATCTGGACGACCTCACAGCCTCCGACTGGTCATTTCTTAAGGGTCTTTAA
Protein Sequence MRHSSPSRAHSTQVPIKVQHRAAKRRAIRRKRVDLNCGCSYYVHINCHNHGFTHRGTHHCSSSSEWRVYLEDSKSPLFQDLRAPQPAISHEPRHHHRPDTVQSQPEESTGDSQMFPSLPNLDDLTASDWSFLKGL

NCBI Accession YP_009508361.1
Location 1537-2589
Protein Name replication initiation protein
Coding Region ATGCCACGTGCTTTTAGGTTAAATGCAAAAAACTATTTCCTCACTTATCCCAAATGCTCTCTCACTAAAGAAGAAGCACTCTCACAATTAGAAAACCTACAAACCCCAGTAAACAAAAAATACATAAAGATCTGCAGAGAGCTCCACGAAAATGGGGAACCTCATCTTCACGTGCTCATCCAGTTCGAAGGGAAGTACCAGTGCACGAATAACAGATTCTTCGACCTGGTATCCCCAACCAGGTCAGCACATTTCCATCCGAACATTCAGGGAGCTAAATCAAGCTCGGACGTCAAGTCCTATCTGGAGAAGGACGGAGATACCCTCGAATGGGGAGAGTTTCAGATCGACGGACGATCTGCTAGAGGAGGTCAACAGACGGCCAACGACGCTTACGCCGCAGCGCTTAACACAGGCAGTAAGTCAGAGGCTCTCAGAGTCATTAAGGAGTTAGCTCCAAAGGATTATGTATTACAATTTCATAATTTAAATGCCAATTTAGATAGGATTTTCACACCTCCTCTGGAGGTTTATGTTTCTCCTTTTACTTCTTCTTCCTTCGATCAAGTTCCACAGCCCATAGAGGAATGGGCGTCTGAAAATGTGATGGGTGCCGCTGCGCGGCCTTTGAGACCCAAAAGTATTGTCATAGAGGGTGATAGTCGTACGGGGAAGACCATGTGGGCTAGGTCTTTGGGTCCACATAATTACCTGTGTGGTCATCTAGACCTTAGTCCTAAGGTTTACAGCAACGAGGCCTGGTACAACGTGATTGATGACGTAGATCCCCACTACCTAAAGCACTTTAAAGAATTCATGGGGGCCCAAAGGGACTGGCAAAGCAACACGAAATACGGAAAGCCAGTTCAAATTAAAGGCGGCATTCCCACTATCTTCCTCTGCAATCCAGGACCCAACTCAAGCTATAAAGAGTTCTTGGACGAAGAGAAGAATTCTGCACTGAAAAATTGGGCTTTAAAGAATGCGACATTCATCACCCTCGAGAGCCCACTCTACTCAGGTACCAATCAAGGTCCAACACAGAGCTGCTAA
Protein Sequence MPRAFRLNAKNYFLTYPKCSLTKEEALSQLENLQTPVNKKYIKICRELHENGEPHLHVLIQFEGKYQCTNNRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYLEKDGDTLEWGEFQIDGRSARGGQQTANDAYAAALNTGSKSEALRVIKELAPKDYVLQFHNLNANLDRIFTPPLEVYVSPFTSSSFDQVPQPIEEWASENVMGAAARPLRPKSIVIEGDSRTGKTMWARSLGPHNYLCGHLDLSPKVYSNEAWYNVIDDVDPHYLKHFKEFMGAQRDWQSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLDEEKNSALKNWALKNATFITLESPLYSGTNQGPTQSC

NCBI Accession YP_009508362.1
Location 2136-2438
Protein Name AC4
Coding Region ATGGGGAACCTCATCTTCACGTGCTCATCCAGTTCGAAGGGAAGTACCAGTGCACGAATAACAGATTCTTCGACCTGGTATCCCCAACCAGGTCAGCACATTTCCATCCGAACATTCAGGGAGCTAAATCAAGCTCGGACGTCAAGTCCTATCTGGAGAAGGACGGAGATACCCTCGAATGGGGAGAGTTTCAGATCGACGGACGATCTGCTAGAGGAGGTCAACAGACGGCCAACGACGCTTACGCCGCAGCGCTTAACACAGGCAGTAAGTCAGAGGCTCTCAGAGTCATTAAGGAGTTAG
Protein Sequence MGNLIFTCSSSSKGSTSARITDSSTWYPQPGQHISIRTFRELNQARTSSPIWRRTEIPSNGESFRSTDDLLEEVNRRPTTLTPQRLTQAVSQRLSESLRS

References More References in PubMed

1

Ten new nortriterpenes from Euphorbia resinifera and their anti-tomato yellow leaf curl virus activities.

Zhao ND, et al.  Fitoterapia. 2021 Sep;153:104989. doi: 10.1016/j.fitote.2021.104989. Epub 2021 Jul 9.

PMID: 34252513
2

Infectivity of Euphorbia leaf curl virus and interaction with Tomato yellow leaf curl China betasatellite.

Wu J, et al.  Arch Virol. 2011 Mar;156(3):517-21. doi: 10.1007/s00705-010-0873-z. Epub 2010 Dec 7.

PMID: 21136128
3

Host range and genetic diversity of croton yellow vein mosaic virus, a weed-infecting monopartite begomovirus causing leaf curl disease in tomato.

Pramesh D, et al.  Arch Virol. 2013 Mar;158(3):531-42. doi: 10.1007/s00705-012-1511-8. Epub 2012 Oct 25.

PMID: 23096697
4

First Report of Tomato Yellow Leaf Curl Virus in Réunion Island.

Peterschmitt M, et al.  Plant Dis. 1999 Mar;83(3):303. doi: 10.1094/PDIS.1999.83.3.303B.

PMID: 30845523
5

Molecular and biological characterization of a new Tomato mild yellow leaf curl Aragua virus strain producing severe symptoms in tomato.

Romay G, et al.  Virus Genes. 2017 Dec;53(6):939-942. doi: 10.1007/s11262-017-1478-3. Epub 2017 Jun 20.

PMID: 28639222
6

Biology and interactions of two distinct monopartite begomoviruses and betasatellites associated with radish leaf curl disease in India.

Singh AK, et al.  Virol J. 2012 Feb 16;9:43. doi: 10.1186/1743-422X-9-43.

PMID: 22339942
7

First Report of Passiflora Latent Virus Infecting Passion Fruit (Passiflora edulis) in South Korea.

Choi MK, et al.  Plant Dis. 2023 May 25. doi: 10.1094/PDIS-01-23-0051-PDN. Online ahead of print.

PMID: 37227438
8

Preliminary identification and coat protein gene phylogenetic relationships of begomoviruses associated with native flora and cultivated plants from the Yucatan Peninsula of Mexico.

Hernández-Zepeda C, et al.  Virus Genes. 2007 Dec;35(3):825-33. doi: 10.1007/s11262-007-0149-1. Epub 2007 Aug 8.

PMID: 17682933
9

Isolation and sequence characterization of DNA-A genome of a new begomovirus strain associated with severe leaf curling symptoms of Jatropha curcas L.

Chauhan S, et al.  Gene. 2018 Jul 20;664:37-43. doi: 10.1016/j.gene.2018.04.062. Epub 2018 Apr 22.

PMID: 29684487
10

Molecular characterization of a new begomovirus that infects Euphorbia heterophylla and Solanum lycopersicum in Venezuela.

Zambrano K, et al.  Arch Virol. 2012 Feb;157(2):379-82. doi: 10.1007/s00705-011-1157-y. Epub 2011 Nov 4.

PMID: 22052541