Genus | Begomovirus |
---|---|
NCBI Assembly | GCF_000869345.1 |
Isolate | Mexico: Yucatan |
Release date | 2015/2/13 |
Submitter | Hernandez-Zepeda,C., Idris,A.M., Carnevali,G., Brown,J.K., Moreno-Valenzuela,O.A. |
Host | |
Vector | |
Download | Genome |GFF3 |PEP |CDS |
NCBI Accession | YP_717927.1 |
---|---|
Location | 203-958 |
Gene Name | AV1 |
Protein Name | coat protein |
Coding Region | ATGGTTAAGAGGGATGCCCCATGGCGACTATCGGCGGGGACCTTTAAGGTTTCCCGCTCTTCTAACTATTCGCCTCGTGGAGGTATGGGCCCTAAATTGGATAAGGCCGCTGCGTGGGTTAATAGGCCCATGTACAGAAAGCCCAGGATCTATCGGACGCTGAGAGGGCCCGACGTTCCCAAAGGCTGTGAAGGGCCCTGCAAGGTTCAGTCTTACGAGCAGCGGCACGACATTTCTCACGTTGGTAAGGTGATTTGCATATCTGACGTGACCCGTGGTAACGGTATAACACATCGTGTAGGCAAACGTTTCTGCGTCAAGTCTGTATATATTTTAGGGAAGATATGGATGGACGAGAATATCAAGTTGAAGAACCACACCAACAGCGTCATGTTTTGGCTGGTTAGAGATCGTAGACCGTATGGAACGCCTATGGATTTTGGTCAAGTGTTCAACATGTTCGATAACGAGCCCAGTACAGCTACGGTCAAGAACGATCTCCGCGATCGCTACCAGGTGATGCACAAGTTTTACGCGAAGGTTACCGGTGGACAATACGCGAGCAACGAGCAGGCGTTGGTGAAGAGATTCTGGAAGGTCAACAACCATGTGGTGTACAACCATCAGGAAGCAGGGAAATATGAGAATCATACGGAGAACGCGTTGTTATTGTATATGGCATGTACTCATGCATCTAACCCCGTGTATGCGACATTGAAAATTCGGATCTATTTTTATGATTCGATAATGAATTAA |
Protein Sequence | MVKRDAPWRLSAGTFKVSRSSNYSPRGGMGPKLDKAAAWVNRPMYRKPRIYRTLRGPDVPKGCEGPCKVQSYEQRHDISHVGKVICISDVTRGNGITHRVGKRFCVKSVYILGKIWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATVKNDLRDRYQVMHKFYAKVTGGQYASNEQALVKRFWKVNNHVVYNHQEAGKYENHTENALLLYMACTHASNPVYATLKIRIYFYDSIMN |
NCBI Accession | YP_717928.1 |
---|---|
Location | 955-1353 |
Gene Name | AC3 |
Protein Name | replication enhancer protein REn |
Coding Region | ATGGATTCACGCACCGGGGAGAACATCACTGCGTCTCAGGCAGAGAATTCCGTTTTTATCTGGGAGGTTCCAAATCCCCTCTATTTCAAGATAATCAGAGTAGAGGATCCAGTTCATACGTGGGTCAGAGTATACCACGTCCAAATCCGGTTCAACTACAACCTCAGGAAGGCGTTGAATCTACACCAAGCCTACCTGAACTTCCAAGTCTGGACGACATCAGTTCGAGCTTCTGGGACGAGCTATTTAAGTCGCTTTAGGCATTTAGTTATGTTGTATTTAGATCGGCTTGGTGTGATTGGAATTAATAATGTCATTAGAGCTGTGCGTTTCGCAACAGACCGTTCATATGTAAATTATGTACTCGAAGATCATGAAATAAAGTTTAATATTTATTAA |
Protein Sequence | MDSRTGENITASQAENSVFIWEVPNPLYFKIIRVEDPVHTWVRVYHVQIRFNYNLRKALNLHQAYLNFQVWTTSVRASGTSYLSRFRHLVMLYLDRLGVIGINNVIRAVRFATDRSYVNYVLEDHEIKFNIY |
NCBI Accession | YP_717929.1 |
---|---|
Location | 1094-1489 |
Gene Name | AC2 |
Protein Name | TrAP transactivator protein |
Coding Region | ATGCTAAATTCATCTTCCTCAACTCCCCCCTCTATCAAACCACAGCACAGGATTGCCAAGAAGAGAGCCATACGTCGACGACGGATTGACTTGAACTGCGGCTGTTCCATATTCCTCCACATCAACTGCGCGGATAATGGATTCACGCACCGGGGAGAACATCACTGCGTCTCAGGCAGAGAATTCCGTTTTTATCTGGGAGGTTCCAAATCCCCTCTATTTCAAGATAATCAGAGTAGAGGATCCAGTTCATACGTGGGTCAGAGTATACCACGTCCAAATCCGGTTCAACTACAACCTCAGGAAGGCGTTGAATCTACACCAAGCCTACCTGAACTTCCAAGTCTGGACGACATCAGTTCGAGCTTCTGGGACGAGCTATTTAAGTCGCTTTAG |
Protein Sequence | MLNSSSSTPPSIKPQHRIAKKRAIRRRRIDLNCGCSIFLHINCADNGFTHRGEHHCVSGREFRFYLGGSKSPLFQDNQSRGSSSYVGQSIPRPNPVQLQPQEGVESTPSLPELPSLDDISSSFWDELFKSL |
NCBI Accession | YP_717930.1 |
---|---|
Location | 1401-2555 |
Gene Name | AC1 |
Protein Name | rep protein |
Coding Region | ATGGGACACCAGGACACCAGCAATAATAGGTTTTATGAGAGAGTCACCCTGGTGTCCTGGCTTATATTTACAAAAATGCCACGGAACCCTAATTCATTTCGTCTTGCTGCCAAAAGCATTTTCTTAACATATCCTCAGTGCGATGTTCCCAAAGATGAAGTTCTTCAGATGCTTCAACATCTGCCTTGGTCAGTCGTCAAACCGACGTACATCCGAGTCGCTAGAGAGGAACATCGCGATGGGTTCCCGCACTTACACTGCCTCATACAATTATCCGGCAAGTCCAACATCAAGGATGCTAGATTTTTCGACCTATCTCACCCCAGACGGTCTGCCCGTTTTCACCCAAATGTGCAAGCAGCCAAGGACGCCAACGCCGTCAAGAATTACATCACCAAAGAAGGTGATTATTGTGAATCCGGGCAATATAGAGTGTCTGGGGGTACAAAGTCCAATAAAGACGACGTATATCACAACGCCGTCAATGCAGCAAGTGCGGGAGAGGCTCTCGACATTATAAAAGCTGGCGATCCTAAAACGTTTATCGTTAGTTATCATAATTTGAAAGCTAACATCGATCGCCTCTTTCGTAAGGCCCCAGAACCGTGGACCCCTCCTTTTAGTCTTTCGTCGTTCGTCAATGTGCCAGAAGAGATGCAAGAGTGGGCGGATGATTATTTTGGGAGGGGTGCCGCTGCGCGGCCAGAGAGACCGATTAGTTTGATAGTCGAAGGGGATTCACGAACGGGCAAGACAATGTGGGCTCGTGCTTTAGGCCCACATAATTATCTGAGCGGTCATCTTGATTTCAATTCTAGGGTATACTCCAATCAAGTGGAGTATAACGTCATAGATGATGTCAATCCGCAATACTTAAAGCTAAAGCACTGGAAGGAATTGATTGGGGCCCAAAAGGACTGGCAGTCCAACTGTAAATATGGAAAGCCGGTTCAAATTAAAGGAGGTATCCCATCAATCGTGCTGTGCAATCCAGGAGAGGGGGGGTCATATAAAGATTTCCTCGAGAAAGAGGAAAATGCACCACTGAGAGCCTGGACATTAAAAAATGCTAAATTCATCTTCCTCAACTCCCCCCTCTATCAAACCACAGCACAGGATTGCCAAGAAGAGAGCCATACGTCGACGACGGATTGA |
Protein Sequence | MGHQDTSNNRFYERVTLVSWLIFTKMPRNPNSFRLAAKSIFLTYPQCDVPKDEVLQMLQHLPWSVVKPTYIRVAREEHRDGFPHLHCLIQLSGKSNIKDARFFDLSHPRRSARFHPNVQAAKDANAVKNYITKEGDYCESGQYRVSGGTKSNKDDVYHNAVNAASAGEALDIIKAGDPKTFIVSYHNLKANIDRLFRKAPEPWTPPFSLSSFVNVPEEMQEWADDYFGRGAAARPERPISLIVEGDSRTGKTMWARALGPHNYLSGHLDFNSRVYSNQVEYNVIDDVNPQYLKLKHWKELIGAQKDWQSNCKYGKPVQIKGGIPSIVLCNPGEGGSYKDFLEKEENAPLRAWTLKNAKFIFLNSPLYQTTAQDCQEESHTSTTD |
NCBI Accession | YP_717931.1 |
---|---|
Location | 532-1302 |
Gene Name | BV1 |
Protein Name | nuclear shuttle protein |
Coding Region | ATGTATTCTACTAAGTATAGACGTGGTGGGTCGACTTCTCATCGTCGATTTAATTCACGTAATACATTGTTTAAGCGTCAGCATCCTAGCAGGCGTGTTGATTATAGACGTCGACCCAGCAGCCCTAACAAGGCCCACGACGACTCGACGATGATTAATCAACGTATTCACGAAGACCAGTTTGGGCCCGAATTTGTATTGGCCCATAATATGGCCTTGTCCTCGTACATTAGCTTCCCCAGTCTCACGAGGACTGAACCCAATAGGTCTAGGTCATACATCAAGTTACGACGACTACGTTATAAGGGCACGCTCAAGATTGAACGTGTTCAGTCCGACATGAACCTTGATGGGTCAAGCCCTAAGATCGAAGGAGTATTCACTATGGTCGTTGTGGTCGATCGTAAACCTCATTTGAACCCAACTGGATGTCTACATACGTTTGACGATTTATTTGGAGCGAGGATCCATAGTCACGGCAATTTGACAATCACTCCTTCGCTGAAAGATCGATTTTATATACGTCATGTGATGAAACGTGTATTGTCTGTCGAGAAGGACTCGTTGATGGTCGATCTTGAAGGATCTACGGCGTTATCTAACAAACGTGTTAACTGCTGGGCAGCATTTAGGGATCTCGATAGAGACTCATGTAACGGCGTATATGCCAATATTAGCAAGAACGCCTTATTAGTTTATTACTGCTGGATGTCCGATGCTATGTCTAAGGCATCAACGTTTGTATCATTTGATTTGGATTATTTCGGATAA |
Protein Sequence | MYSTKYRRGGSTSHRRFNSRNTLFKRQHPSRRVDYRRRPSSPNKAHDDSTMINQRIHEDQFGPEFVLAHNMALSSYISFPSLTRTEPNRSRSYIKLRRLRYKGTLKIERVQSDMNLDGSSPKIEGVFTMVVVVDRKPHLNPTGCLHTFDDLFGARIHSHGNLTITPSLKDRFYIRHVMKRVLSVEKDSLMVDLEGSTALSNKRVNCWAAFRDLDRDSCNGVYANISKNALLVYYCWMSDAMSKASTFVSFDLDYFG |
NCBI Accession | YP_717932.1 |
---|---|
Location | 1390-2109 |
Gene Name | BC2 |
Protein Name | movement protein |
Coding Region | ATGAAGATCGACCACTGCGTGATAGAATATAGACAACAAGTACCTATCAACGCCTCCGGTACGGTGGTAGTGGAGATTCACGACAAGAGAATGACTGACGATGAGTCGTTACAGGCGTCGTGGACTTTCCCGATAAGATGCAACATAGATCTCCACTACTTTTCATCTTCATTCTTCTCTCTCAAAGACCCGGTTCCTTGGAAACTATATTACAAAGTTTGCGATACGAACGTACATCAAATGACACACTTCGCAAAATTCAAGGGTAAACTGAAATTGTCGACTGCTAAACATTCAGTTGATATACCCTTCCGGGCTCCGACGGTCAAGATATTGTCAAAACAGTTTACCGATAAGGATATAGATTTCAGTCATGTGGGATACGGCAAGTGGGAGAGAAGAATGATAAAATCCGCATCCTCCAGATATGGCCTTCCAGGCCCAATTGCTATTAATCCAGGAGAGTCCTGGGCTAGTAGGAGTACTATAGGCCCGGTCCATTCGAATGCGGATTCGGACGAGATTCATCCATACAGAGAGCTAAACCGGTTGAGTACACCAGTCCTGGACCCAGGTGATTCCGCATCTGTCGTCGCAGCCCATAGGGCCCAATCAAATATAACGTTGTCTGTAGCCCAGATTAATGAGATAGTCAGGTCGACGGTCCAGGAGTGTATCAACACAAACTGTCTCCCCTCACATACGAAATCGTTGCAATAA |
Protein Sequence | MKIDHCVIEYRQQVPINASGTVVVEIHDKRMTDDESLQASWTFPIRCNIDLHYFSSSFFSLKDPVPWKLYYKVCDTNVHQMTHFAKFKGKLKLSTAKHSVDIPFRAPTVKILSKQFTDKDIDFSHVGYGKWERRMIKSASSRYGLPGPIAINPGESWASRSTIGPVHSNADSDEIHPYRELNRLSTPVLDPGDSASVVAAHRAQSNITLSVAQINEIVRSTVQECINTNCLPSHTKSLQ |
1 |
Genome Sequence of Euphorbia mosaic virus from Passionfruit and Euphorbia heterophylla in Florida. Polston JE, et al. Genome Announc. 2017 Mar 2;5(9):e01714-16. doi: 10.1128/genomeA.01714-16. PMID: 28254981 |
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2 |
Detection of Poinsettia mosaic virus Infecting Poinsettias (Euphorbia pulcherrima) in Venezuela. Carballo O, et al. Plant Dis. 2001 Nov;85(11):1208. doi: 10.1094/PDIS.2001.85.11.1208D. PMID: 30823179 |
3 |
Mar TB, et al. J Gen Virol. 2017 Jun;98(6):1537-1551. doi: 10.1099/jgv.0.000784. Epub 2017 Jun 13. PMID: 28612702 |
4 |
Mar TB, et al. J Gen Virol. 2017 Jun;98(6):1552-1562. doi: 10.1099/jgv.0.000814. Epub 2017 Jun 8. PMID: 28590236 |
5 |
Detection of Poinsettia mosaic virus by RT-PCR in Euphorbia spp. in New Zealand. Lebas BSM, et al. Plant Dis. 2007 Jan;91(1):110. doi: 10.1094/PD-91-0110A. PMID: 30781078 |
6 |
Fernandes FR, et al. Arch Virol. 2011 Nov;156(11):2063-9. doi: 10.1007/s00705-011-1070-4. Epub 2011 Jul 22. PMID: 21779908 |
7 |
Clarke JL, et al. Plant Cell Rep. 2008 Jun;27(6):1027-38. doi: 10.1007/s00299-008-0526-9. Epub 2008 Mar 8. PMID: 18327592 |
8 |
Villanueva-Alonzo HJ, et al. Biotechnol Lett. 2013 May;35(5):811-23. doi: 10.1007/s10529-013-1146-1. Epub 2013 Apr 2. PMID: 23546940 |
9 |
Two New Hosts for Poinsettia Mosaic Virus. Floeistad E, et al. Plant Dis. 1999 Apr;83(4):399. doi: 10.1094/PDIS.1999.83.4.399D. PMID: 30845606 |
10 |
Collins AM, et al. Arch Virol. 2009;154(11):1859-60. doi: 10.1007/s00705-009-0508-4. Epub 2009 Sep 23. PMID: 19774336 |