Euphorbia mosaic virus
Basic Information
| Genus |
Begomovirus
|
| NCBI Assembly |
GCF_000869345.1 |
| Isolate |
Mexico: Yucatan |
| Release date |
2015/2/13 |
| Submitter |
Hernandez-Zepeda,C., Idris,A.M., Carnevali,G., Brown,J.K., Moreno-Valenzuela,O.A. |
| Host |
|
| Vector |
|
| Download |
Genome
|GFF3
|PEP
|CDS |
Genomic Organization
JBrowse
Genome
ACCGGATGGCCGCGATTTTTTTGGTGTCCTCTTAGCCCGGCCCAGGCCCAACCGCAAAGCTATTCTCGTCCTTTTATGGGACCACTACAATTATTTTTGACCAATCATAGTGCGCCTGACAAGCCTATATAATTATGACTTACCCACCAAGCTGTGGTCCCTATAAATAAAGATGATTAACCCCATACCTCTTTAATTCAAAATGGTTAAGAGGGATGCCCCATGGCGACTATCGGCGGGGACCTTTAAGGTTTCCCGCTCTTCTAACTATTCGCCTCGTGGAGGTATGGGCCCTAAATTGGATAAGGCCGCTGCGTGGGTTAATAGGCCCATGTACAGAAAGCCCAGGATCTATCGGACGCTGAGAGGGCCCGACGTTCCCAAAGGCTGTGAAGGGCCCTGCAAGGTTCAGTCTTACGAGCAGCGGCACGACATTTCTCACGTTGGTAAGGTGATTTGCATATCTGACGTGACCCGTGGTAACGGTATAACACATCGTGTAGGCAAACGTTTCTGCGTCAAGTCTGTATATATTTTAGGGAAGATATGGATGGACGAGAATATCAAGTTGAAGAACCACACCAACAGCGTCATGTTTTGGCTGGTTAGAGATCGTAGACCGTATGGAACGCCTATGGATTTTGGTCAAGTGTTCAACATGTTCGATAACGAGCCCAGTACAGCTACGGTCAAGAACGATCTCCGCGATCGCTACCAGGTGATGCACAAGTTTTACGCGAAGGTTACCGGTGGACAATACGCGAGCAACGAGCAGGCGTTGGTGAAGAGATTCTGGAAGGTCAACAACCATGTGGTGTACAACCATCAGGAAGCAGGGAAATATGAGAATCATACGGAGAACGCGTTGTTATTGTATATGGCATGTACTCATGCATCTAACCCCGTGTATGCGACATTGAAAATTCGGATCTATTTTTATGATTCGATAATGAATTAATAAATATTAAACTTTATTTCATGATCTTCGAGTACATAATTTACATATGAACGGTCTGTTGCGAAACGCACAGCTCTAATGACATTATTAATTCCAATCACACCAAGCCGATCTAAATACAACATAACTAAATGCCTAAAGCGACTTAAATAGCTCGTCCCAGAAGCTCGAACTGATGTCGTCCAGACTTGGAAGTTCAGGTAGGCTTGGTGTAGATTCAACGCCTTCCTGAGGTTGTAGTTGAACCGGATTTGGACGTGGTATACTCTGACCCACGTATGAACTGGATCCTCTACTCTGATTATCTTGAAATAGAGGGGATTTGGAACCTCCCAGATAAAAACGGAATTCTCTGCCTGAGACGCAGTGATGTTCTCCCCGGTGCGTGAATCCATTATCCGCGCAGTTGATGTGGAGGAATATGGAACAGCCGCAGTTCAAGTCAATCCGTCGTCGACGTATGGCTCTCTTCTTGGCAATCCTGTGCTGTGGTTTGATAGAGGGGGGAGTTGAGGAAGATGAATTTAGCATTTTTTAATGTCCAGGCTCTCAGTGGTGCATTTTCCTCTTTCTCGAGGAAATCTTTATATGACCCCCCCTCTCCTGGATTGCACAGCACGATTGATGGGATACCTCCTTTAATTTGAACCGGCTTTCCATATTTACAGTTGGACTGCCAGTCCTTTTGGGCCCCAATCAATTCCTTCCAGTGCTTTAGCTTTAAGTATTGCGGATTGACATCATCTATGACGTTATACTCCACTTGATTGGAGTATACCCTAGAATTGAAATCAAGATGACCGCTCAGATAATTATGTGGGCCTAAAGCACGAGCCCACATTGTCTTGCCCGTTCGTGAATCCCCTTCGACTATCAAACTAATCGGTCTCTCTGGCCGCGCAGCGGCACCCCTCCCAAAATAATCATCCGCCCACTCTTGCATCTCTTCTGGCACATTGACGAACGACGAAAGACTAAAAGGAGGGGTCCACGGTTCTGGGGCCTTACGAAAGAGGCGATCGATGTTAGCTTTCAAATTATGATAACTAACGATAAACGTTTTAGGATCGCCAGCTTTTATAATGTCGAGAGCCTCTCCCGCACTTGCTGCATTGACGGCGTTGTGATATACGTCGTCTTTATTGGACTTTGTACCCCCAGACACTCTATATTGCCCGGATTCACAATAATCACCTTCTTTGGTGATGTAATTCTTGACGGCGTTGGCGTCCTTGGCTGCTTGCACATTTGGGTGAAAACGGGCAGACCGTCTGGGGTGAGATAGGTCGAAAAATCTAGCATCCTTGATGTTGGACTTGCCGGATAATTGTATGAGGCAGTGTAAGTGCGGGAACCCATCGCGATGTTCCTCTCTAGCGACTCGGATGTACGTCGGTTTGACGACTGACCAAGGCAGATGTTGAAGCATCTGAAGAACTTCATCTTTGGGAACATCGCACTGAGGATATGTTAAGAAAATGCTTTTGGCAGCAAGACGAAATGAATTAGGGTTCCGTGGCATTTTTGTAAATATAAGCCAGGACACCAGGGTGACTCTCTCATAAAACCTATTATTGCTGGTGTCCTGGTGTCCCATTTATACTAAAAGTCTCTGGGGGACACTAGGGGCAAAAGCGGCCATCCGCAATAATATT
ACCGGATGGCCGCGATTTTTTTGGTGTCCCCGTTCTCGGCCCAGGCCCAACCGCATTTTACACACTCAAAACGCTCCGTTTTGTCATCTATTTATGCGGGACCACCGAATAGATGTCAGGACCACTTGCAAAATGACAATTATTTTTGACCAATCACGTCTCGCGTGAGTAGCCTACATAATAACGACTTATCCGCCAAGTCGTTGCCCTATTTACTGAAGGGTATCTGGAATTGTCATTTTCTTCTTTAATTCAAATTTGGGAGCGGGAACGGTCATGGTGTTTAACGACGTGATTGCACTAGCGTTGTGGTCCTAGCCACAATCCACAACAACTTAACATATCCTCAGTGCGATGTTCCCAAAGATGAAGTTCTTCAGATGCTGCGATCCAATGAAATTTCAGCTACAAAGTCTAGTTATCGAACATGTTGAGTCCAGATCTGTTTAAATATAGTATTGGTTTCATTGGATCTCACGTCTATACATTCAGTTCCTGGTCATCTTACATCATCTAGCTACAATAGTTGATATGTATTCTACTAAGTATAGACGTGGTGGGTCGACTTCTCATCGTCGATTTAATTCACGTAATACATTGTTTAAGCGTCAGCATCCTAGCAGGCGTGTTGATTATAGACGTCGACCCAGCAGCCCTAACAAGGCCCACGACGACTCGACGATGATTAATCAACGTATTCACGAAGACCAGTTTGGGCCCGAATTTGTATTGGCCCATAATATGGCCTTGTCCTCGTACATTAGCTTCCCCAGTCTCACGAGGACTGAACCCAATAGGTCTAGGTCATACATCAAGTTACGACGACTACGTTATAAGGGCACGCTCAAGATTGAACGTGTTCAGTCCGACATGAACCTTGATGGGTCAAGCCCTAAGATCGAAGGAGTATTCACTATGGTCGTTGTGGTCGATCGTAAACCTCATTTGAACCCAACTGGATGTCTACATACGTTTGACGATTTATTTGGAGCGAGGATCCATAGTCACGGCAATTTGACAATCACTCCTTCGCTGAAAGATCGATTTTATATACGTCATGTGATGAAACGTGTATTGTCTGTCGAGAAGGACTCGTTGATGGTCGATCTTGAAGGATCTACGGCGTTATCTAACAAACGTGTTAACTGCTGGGCAGCATTTAGGGATCTCGATAGAGACTCATGTAACGGCGTATATGCCAATATTAGCAAGAACGCCTTATTAGTTTATTACTGCTGGATGTCCGATGCTATGTCTAAGGCATCAACGTTTGTATCATTTGATTTGGATTATTTCGGATAAATAATAACATATATTTCTGCATAGGTGCTCGGTTTGAGTTCTTACCCAACAATCATATCTCATAACATAAATTATTACATAATTTATTTATTGCAACGATTTCGTATGTGAGGGGAGACAGTTTGTGTTGATACACTCCTGGACCGTCGACCTGACTATCTCATTAATCTGGGCTACAGACAACGTTATATTTGATTGGGCCCTATGGGCTGCGACGACAGATGCGGAATCACCTGGGTCCAGGACTGGTGTACTCAACCGGTTTAGCTCTCTGTATGGATGAATCTCGTCCGAATCCGCATTCGAATGGACCGGGCCTATAGTACTCCTACTAGCCCAGGACTCTCCTGGATTAATAGCAATTGGGCCTGGAAGGCCATATCTGGAGGATGCGGATTTTATCATTCTTCTCTCCCACTTGCCGTATCCCACATGACTGAAATCTATATCCTTATCGGTAAACTGTTTTGACAATATCTTGACCGTCGGAGCCCGGAAGGGTATATCAACTGAATGTTTAGCAGTCGACAATTTCAGTTTACCCTTGAATTTTGCGAAGTGTGTCATTTGATGTACGTTCGTATCGCAAACTTTGTAATATAGTTTCCAAGGAACCGGGTCTTTGAGAGAGAAGAATGAAGATGAAAAGTAGTGGAGATCTATGTTGCATCTTATCGGGAAAGTCCACGACGCCTGTAACGACTCATCGTCAGTCATTCTCTTGTCGTGAATCTCCACTACCACCGTACCGGAGGCGTTGATAGGTACTTGTTGTCTATATTCTATCACGCAGTGGTCGATCTTCATACAGCTGCGACTCAGCCTCGCACTCAGTTGAGACGCCGTAGACGGAAATTGCAATACTATCTCAGTTAGGTCATGAGATAGCTGATACTCATCACGACGAGATTCGATATAATTAAAAACGTTTGGGGGTGTTACTAATTGTGAATCCATGGCCGCGCAGCGGAATTGCTCAACAATTCTGAGAGAGGAAGATAATGACTATCTATGACGGAAGTCGATCGGAGGAAATGCTAAGACTAAGGAAGAGCTAATATTAAGGTTAATGCCCGATTAAAGAAGGGCTATTGGAATAGATGTTGATGACGGAGTCGATAAATAACCTTCCTTATATAGACGTAATGCCTAGTAGTCAGTGGCATTTTTGTAATTATGACCCAGGACACCAGGGAGGCTCTCTCATAAAACCTATTATTGCTGGTGTCCTGGTGTCCCATTTATACTAGAAGTCTCTAGGACACCAAGGGGGCACGTGGCGGCCATCCGCAATAATATT
Gene Information
|
NCBI Accession
|
YP_717927.1
|
|
Location
|
203-958 |
|
Gene Name
|
AV1 |
|
Protein Name
|
coat protein |
|
Coding Region
|
ATGGTTAAGAGGGATGCCCCATGGCGACTATCGGCGGGGACCTTTAAGGTTTCCCGCTCTTCTAACTATTCGCCTCGTGGAGGTATGGGCCCTAAATTGGATAAGGCCGCTGCGTGGGTTAATAGGCCCATGTACAGAAAGCCCAGGATCTATCGGACGCTGAGAGGGCCCGACGTTCCCAAAGGCTGTGAAGGGCCCTGCAAGGTTCAGTCTTACGAGCAGCGGCACGACATTTCTCACGTTGGTAAGGTGATTTGCATATCTGACGTGACCCGTGGTAACGGTATAACACATCGTGTAGGCAAACGTTTCTGCGTCAAGTCTGTATATATTTTAGGGAAGATATGGATGGACGAGAATATCAAGTTGAAGAACCACACCAACAGCGTCATGTTTTGGCTGGTTAGAGATCGTAGACCGTATGGAACGCCTATGGATTTTGGTCAAGTGTTCAACATGTTCGATAACGAGCCCAGTACAGCTACGGTCAAGAACGATCTCCGCGATCGCTACCAGGTGATGCACAAGTTTTACGCGAAGGTTACCGGTGGACAATACGCGAGCAACGAGCAGGCGTTGGTGAAGAGATTCTGGAAGGTCAACAACCATGTGGTGTACAACCATCAGGAAGCAGGGAAATATGAGAATCATACGGAGAACGCGTTGTTATTGTATATGGCATGTACTCATGCATCTAACCCCGTGTATGCGACATTGAAAATTCGGATCTATTTTTATGATTCGATAATGAATTAA |
|
Protein Sequence
|
MVKRDAPWRLSAGTFKVSRSSNYSPRGGMGPKLDKAAAWVNRPMYRKPRIYRTLRGPDVPKGCEGPCKVQSYEQRHDISHVGKVICISDVTRGNGITHRVGKRFCVKSVYILGKIWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATVKNDLRDRYQVMHKFYAKVTGGQYASNEQALVKRFWKVNNHVVYNHQEAGKYENHTENALLLYMACTHASNPVYATLKIRIYFYDSIMN |
|
NCBI Accession
|
YP_717928.1
|
|
Location
|
955-1353 |
|
Gene Name
|
AC3 |
|
Protein Name
|
replication enhancer protein REn |
|
Coding Region
|
ATGGATTCACGCACCGGGGAGAACATCACTGCGTCTCAGGCAGAGAATTCCGTTTTTATCTGGGAGGTTCCAAATCCCCTCTATTTCAAGATAATCAGAGTAGAGGATCCAGTTCATACGTGGGTCAGAGTATACCACGTCCAAATCCGGTTCAACTACAACCTCAGGAAGGCGTTGAATCTACACCAAGCCTACCTGAACTTCCAAGTCTGGACGACATCAGTTCGAGCTTCTGGGACGAGCTATTTAAGTCGCTTTAGGCATTTAGTTATGTTGTATTTAGATCGGCTTGGTGTGATTGGAATTAATAATGTCATTAGAGCTGTGCGTTTCGCAACAGACCGTTCATATGTAAATTATGTACTCGAAGATCATGAAATAAAGTTTAATATTTATTAA |
|
Protein Sequence
|
MDSRTGENITASQAENSVFIWEVPNPLYFKIIRVEDPVHTWVRVYHVQIRFNYNLRKALNLHQAYLNFQVWTTSVRASGTSYLSRFRHLVMLYLDRLGVIGINNVIRAVRFATDRSYVNYVLEDHEIKFNIY |
|
NCBI Accession
|
YP_717929.1
|
|
Location
|
1094-1489 |
|
Gene Name
|
AC2 |
|
Protein Name
|
TrAP transactivator protein |
|
Coding Region
|
ATGCTAAATTCATCTTCCTCAACTCCCCCCTCTATCAAACCACAGCACAGGATTGCCAAGAAGAGAGCCATACGTCGACGACGGATTGACTTGAACTGCGGCTGTTCCATATTCCTCCACATCAACTGCGCGGATAATGGATTCACGCACCGGGGAGAACATCACTGCGTCTCAGGCAGAGAATTCCGTTTTTATCTGGGAGGTTCCAAATCCCCTCTATTTCAAGATAATCAGAGTAGAGGATCCAGTTCATACGTGGGTCAGAGTATACCACGTCCAAATCCGGTTCAACTACAACCTCAGGAAGGCGTTGAATCTACACCAAGCCTACCTGAACTTCCAAGTCTGGACGACATCAGTTCGAGCTTCTGGGACGAGCTATTTAAGTCGCTTTAG |
|
Protein Sequence
|
MLNSSSSTPPSIKPQHRIAKKRAIRRRRIDLNCGCSIFLHINCADNGFTHRGEHHCVSGREFRFYLGGSKSPLFQDNQSRGSSSYVGQSIPRPNPVQLQPQEGVESTPSLPELPSLDDISSSFWDELFKSL |
|
NCBI Accession
|
YP_717930.1
|
|
Location
|
1401-2555 |
|
Gene Name
|
AC1 |
|
Protein Name
|
rep protein |
|
Coding Region
|
ATGGGACACCAGGACACCAGCAATAATAGGTTTTATGAGAGAGTCACCCTGGTGTCCTGGCTTATATTTACAAAAATGCCACGGAACCCTAATTCATTTCGTCTTGCTGCCAAAAGCATTTTCTTAACATATCCTCAGTGCGATGTTCCCAAAGATGAAGTTCTTCAGATGCTTCAACATCTGCCTTGGTCAGTCGTCAAACCGACGTACATCCGAGTCGCTAGAGAGGAACATCGCGATGGGTTCCCGCACTTACACTGCCTCATACAATTATCCGGCAAGTCCAACATCAAGGATGCTAGATTTTTCGACCTATCTCACCCCAGACGGTCTGCCCGTTTTCACCCAAATGTGCAAGCAGCCAAGGACGCCAACGCCGTCAAGAATTACATCACCAAAGAAGGTGATTATTGTGAATCCGGGCAATATAGAGTGTCTGGGGGTACAAAGTCCAATAAAGACGACGTATATCACAACGCCGTCAATGCAGCAAGTGCGGGAGAGGCTCTCGACATTATAAAAGCTGGCGATCCTAAAACGTTTATCGTTAGTTATCATAATTTGAAAGCTAACATCGATCGCCTCTTTCGTAAGGCCCCAGAACCGTGGACCCCTCCTTTTAGTCTTTCGTCGTTCGTCAATGTGCCAGAAGAGATGCAAGAGTGGGCGGATGATTATTTTGGGAGGGGTGCCGCTGCGCGGCCAGAGAGACCGATTAGTTTGATAGTCGAAGGGGATTCACGAACGGGCAAGACAATGTGGGCTCGTGCTTTAGGCCCACATAATTATCTGAGCGGTCATCTTGATTTCAATTCTAGGGTATACTCCAATCAAGTGGAGTATAACGTCATAGATGATGTCAATCCGCAATACTTAAAGCTAAAGCACTGGAAGGAATTGATTGGGGCCCAAAAGGACTGGCAGTCCAACTGTAAATATGGAAAGCCGGTTCAAATTAAAGGAGGTATCCCATCAATCGTGCTGTGCAATCCAGGAGAGGGGGGGTCATATAAAGATTTCCTCGAGAAAGAGGAAAATGCACCACTGAGAGCCTGGACATTAAAAAATGCTAAATTCATCTTCCTCAACTCCCCCCTCTATCAAACCACAGCACAGGATTGCCAAGAAGAGAGCCATACGTCGACGACGGATTGA |
|
Protein Sequence
|
MGHQDTSNNRFYERVTLVSWLIFTKMPRNPNSFRLAAKSIFLTYPQCDVPKDEVLQMLQHLPWSVVKPTYIRVAREEHRDGFPHLHCLIQLSGKSNIKDARFFDLSHPRRSARFHPNVQAAKDANAVKNYITKEGDYCESGQYRVSGGTKSNKDDVYHNAVNAASAGEALDIIKAGDPKTFIVSYHNLKANIDRLFRKAPEPWTPPFSLSSFVNVPEEMQEWADDYFGRGAAARPERPISLIVEGDSRTGKTMWARALGPHNYLSGHLDFNSRVYSNQVEYNVIDDVNPQYLKLKHWKELIGAQKDWQSNCKYGKPVQIKGGIPSIVLCNPGEGGSYKDFLEKEENAPLRAWTLKNAKFIFLNSPLYQTTAQDCQEESHTSTTD |
|
NCBI Accession
|
YP_717931.1
|
|
Location
|
532-1302 |
|
Gene Name
|
BV1 |
|
Protein Name
|
nuclear shuttle protein |
|
Coding Region
|
ATGTATTCTACTAAGTATAGACGTGGTGGGTCGACTTCTCATCGTCGATTTAATTCACGTAATACATTGTTTAAGCGTCAGCATCCTAGCAGGCGTGTTGATTATAGACGTCGACCCAGCAGCCCTAACAAGGCCCACGACGACTCGACGATGATTAATCAACGTATTCACGAAGACCAGTTTGGGCCCGAATTTGTATTGGCCCATAATATGGCCTTGTCCTCGTACATTAGCTTCCCCAGTCTCACGAGGACTGAACCCAATAGGTCTAGGTCATACATCAAGTTACGACGACTACGTTATAAGGGCACGCTCAAGATTGAACGTGTTCAGTCCGACATGAACCTTGATGGGTCAAGCCCTAAGATCGAAGGAGTATTCACTATGGTCGTTGTGGTCGATCGTAAACCTCATTTGAACCCAACTGGATGTCTACATACGTTTGACGATTTATTTGGAGCGAGGATCCATAGTCACGGCAATTTGACAATCACTCCTTCGCTGAAAGATCGATTTTATATACGTCATGTGATGAAACGTGTATTGTCTGTCGAGAAGGACTCGTTGATGGTCGATCTTGAAGGATCTACGGCGTTATCTAACAAACGTGTTAACTGCTGGGCAGCATTTAGGGATCTCGATAGAGACTCATGTAACGGCGTATATGCCAATATTAGCAAGAACGCCTTATTAGTTTATTACTGCTGGATGTCCGATGCTATGTCTAAGGCATCAACGTTTGTATCATTTGATTTGGATTATTTCGGATAA |
|
Protein Sequence
|
MYSTKYRRGGSTSHRRFNSRNTLFKRQHPSRRVDYRRRPSSPNKAHDDSTMINQRIHEDQFGPEFVLAHNMALSSYISFPSLTRTEPNRSRSYIKLRRLRYKGTLKIERVQSDMNLDGSSPKIEGVFTMVVVVDRKPHLNPTGCLHTFDDLFGARIHSHGNLTITPSLKDRFYIRHVMKRVLSVEKDSLMVDLEGSTALSNKRVNCWAAFRDLDRDSCNGVYANISKNALLVYYCWMSDAMSKASTFVSFDLDYFG |
|
NCBI Accession
|
YP_717932.1
|
|
Location
|
1390-2109 |
|
Gene Name
|
BC2 |
|
Protein Name
|
movement protein |
|
Coding Region
|
ATGAAGATCGACCACTGCGTGATAGAATATAGACAACAAGTACCTATCAACGCCTCCGGTACGGTGGTAGTGGAGATTCACGACAAGAGAATGACTGACGATGAGTCGTTACAGGCGTCGTGGACTTTCCCGATAAGATGCAACATAGATCTCCACTACTTTTCATCTTCATTCTTCTCTCTCAAAGACCCGGTTCCTTGGAAACTATATTACAAAGTTTGCGATACGAACGTACATCAAATGACACACTTCGCAAAATTCAAGGGTAAACTGAAATTGTCGACTGCTAAACATTCAGTTGATATACCCTTCCGGGCTCCGACGGTCAAGATATTGTCAAAACAGTTTACCGATAAGGATATAGATTTCAGTCATGTGGGATACGGCAAGTGGGAGAGAAGAATGATAAAATCCGCATCCTCCAGATATGGCCTTCCAGGCCCAATTGCTATTAATCCAGGAGAGTCCTGGGCTAGTAGGAGTACTATAGGCCCGGTCCATTCGAATGCGGATTCGGACGAGATTCATCCATACAGAGAGCTAAACCGGTTGAGTACACCAGTCCTGGACCCAGGTGATTCCGCATCTGTCGTCGCAGCCCATAGGGCCCAATCAAATATAACGTTGTCTGTAGCCCAGATTAATGAGATAGTCAGGTCGACGGTCCAGGAGTGTATCAACACAAACTGTCTCCCCTCACATACGAAATCGTTGCAATAA |
|
Protein Sequence
|
MKIDHCVIEYRQQVPINASGTVVVEIHDKRMTDDESLQASWTFPIRCNIDLHYFSSSFFSLKDPVPWKLYYKVCDTNVHQMTHFAKFKGKLKLSTAKHSVDIPFRAPTVKILSKQFTDKDIDFSHVGYGKWERRMIKSASSRYGLPGPIAINPGESWASRSTIGPVHSNADSDEIHPYRELNRLSTPVLDPGDSASVVAAHRAQSNITLSVAQINEIVRSTVQECINTNCLPSHTKSLQ |