Genus | Begomovirus |
---|---|
NCBI Assembly | GCF_002822325.1 |
Isolate | Japan: Yamaguchi prefecture |
Release date | 2019/6/28 |
Submitter | Kitamura,K., Murayama,A., Ikegami,M. |
Host | |
Vector | |
Download | Genome |GFF3 |PEP |CDS |
NCBI Accession | YP_009664841.1 |
---|---|
Location | 136-486 |
Gene Name | V2 |
Protein Name | hypothetical protein |
Coding Region | ATGTGGGATCCATTGCTTAACGAATTCCCTGAAACCGTTCACGGTTTTAGGTGTATGCTTGCAATTAAATACCTACAAGGTGTCGAGTCTACGTATTCTCCAGATACGATAGGATACGATCTCATACGTGATCTTATTGCAGTCGTTCGTGCCAAGAACTATGTCGAAGCGTCCTGCCGATATAGTGATTTCCACACCCGCCTCCAAGGTACGTCGCCGGCTCAACTTCGACAGCCCGTATGTCAGCCGTGCGAATGCCCCCACTGTCCTCGTCACAAACAGAAGGAGAACATGGGCTCAAAGGCCCATGTATCGGAAGCCCAGGATGTACCGAATGTACAGAAGCCCTGA |
Protein Sequence | MWDPLLNEFPETVHGFRCMLAIKYLQGVESTYSPDTIGYDLIRDLIAVVRAKNYVEASCRYSDFHTRLQGTSPAQLRQPVCQPCECPHCPRHKQKENMGSKAHVSEAQDVPNVQKP |
NCBI Accession | YP_009664842.1 |
---|---|
Location | 269-553 |
Gene Name | C5 |
Protein Name | hypothetical protein |
Coding Region | ATGACCAACATCGTTTTTCTTCTCAAACGACTGGACCTTACACGGGCCTTCACAACCCTTAGGAACATCAGGGCTTCTGTACATTCGGTACATCCTGGGCTTCCGATACATGGGCCTTTGAGCCCATGTTCTCCTTCTGTTTGTGACGAGGACAGTGGGGGCATTCGCACGGCTGACATACGGGCTGTCGAAGTTGAGCCGGCGACGTACCTTGGAGGCGGGTGTGGAAATCACTATATCGGCAGGACGCTTCGACATAGTTCTTGGCACGAACGACTGCAATAA |
Protein Sequence | MTNIVFLLKRLDLTRAFTTLRNIRASVHSVHPGLPIHGPLSPCSPSVCDEDSGGIRTADIRAVEVEPATYLGGGCGNHYIGRTLRHSSWHERLQ |
NCBI Accession | YP_009664843.1 |
---|---|
Location | 296-1069 |
Gene Name | V1 |
Protein Name | coat protein |
Coding Region | ATGTCGAAGCGTCCTGCCGATATAGTGATTTCCACACCCGCCTCCAAGGTACGTCGCCGGCTCAACTTCGACAGCCCGTATGTCAGCCGTGCGAATGCCCCCACTGTCCTCGTCACAAACAGAAGGAGAACATGGGCTCAAAGGCCCATGTATCGGAAGCCCAGGATGTACCGAATGTACAGAAGCCCTGATGTTCCTAAGGGTTGTGAAGGCCCGTGTAAGGTCCAGTCGTTTGAGAAGAAAAACGATGTTGGTCATTCTGGTACATTGTTATGTGTTTCTGATGTTACTCGTGGTAACGGTCTTACTCATCGTTCTGGGAAGAGATTTTGTATAAAATCTTGTTATATTATTGGTAAAATCTGGATGGATGAGAACATCAAGACTAAAAACCACACTAATACTGTCATGTTTTGGTTAGTTAGAGATAGACGTCCTGTTACTACTCCGTATGGATTTCAAGAGGCATTCAACATGTTTGATAATGAACCCAGTACAGCAACTATCAAGCAGGATCTAAGGGATCGTTTGCAGGTTCTACACAAGTTCAGTGCTACTGTCACTGGTGGACAGTATGCGTCTAAGGAACAGGCAATCGTCAAGAAGTTCTGGAAGTTGAATCATCATGTGACATACAACCATCAAGAGAGTGCTAAATATGAGAATCATACTGAGAATGCATTAATATTGTATATGGCTAGTACTCATGCCAGTAATCCCGTGTATGCAACTTTGAAAATCAGGATCTATTTTTATGATTCTGTTCAGAATTAA |
Protein Sequence | MSKRPADIVISTPASKVRRRLNFDSPYVSRANAPTVLVTNRRRTWAQRPMYRKPRMYRMYRSPDVPKGCEGPCKVQSFEKKNDVGHSGTLLCVSDVTRGNGLTHRSGKRFCIKSCYIIGKIWMDENIKTKNHTNTVMFWLVRDRRPVTTPYGFQEAFNMFDNEPSTATIKQDLRDRLQVLHKFSATVTGGQYASKEQAIVKKFWKLNHHVTYNHQESAKYENHTENALILYMASTHASNPVYATLKIRIYFYDSVQN |
NCBI Accession | YP_009664844.1 |
---|---|
Location | 1066-1470 |
Gene Name | C3 |
Protein Name | hypothetical protein |
Coding Region | ATGGATTCACGCACAGGGACCATCATTACTGCAGCTCAGGCGCAGAGTGGCGCGTATATCTGGACAGTACCAAATCCCCTCTATTTCAAAATCACCAGGCACGATCAACAGTCATTCAACAGAGATCAGGACGTGATAACATTACAGATACAGTTCAACCACAACCTGAGATCCCAGCTGGGTTTGCACAAGTGTTTCCTGATTTTCAAGATCTGGAGTCGCTTACATCCTCAGACATGGCGTTTCTTGAGGGTCTTTAGGACACAAGTAATGAACTACTTAGATAGTTTGGGTGTGATTTCAATTAATAATGTAATTAGAGCAGTTGATCATGTTTTGTATAATAGATTGCAAGGAACAATATATGTACAGACATTTCATGATATAAAATTCAAAGTTTATTAA |
Protein Sequence | MDSRTGTIITAAQAQSGAYIWTVPNPLYFKITRHDQQSFNRDQDVITLQIQFNHNLRSQLGLHKCFLIFKIWSRLHPQTWRFLRVFRTQVMNYLDSLGVISINNVIRAVDHVLYNRLQGTIYVQTFHDIKFKVY |
NCBI Accession | YP_009664845.1 |
---|---|
Location | 1211-1618 |
Gene Name | C2 |
Protein Name | hypothetical protein |
Coding Region | ATGCAACCTTCGTCACCCTCTACAGCCCACTCTACTCAGGTGCCCATCAAAGTCCAGCACAGGATAGCCAAGAAGAAGAACCTTCGCAGGCGGAGGATTGACCTAGGCTGCGGGTGTTCTGTCTACGTGAGCTTAGACTGTGCAAATTATGGATTCACGCACAGGGACCATCATTACTGCAGCTCAGGCGCAGAGTGGCGCGTATATCTGGACAGTACCAAATCCCCTCTATTTCAAAATCACCAGGCACGATCAACAGTCATTCAACAGAGATCAGGACGTGATAACATTACAGATACAGTTCAACCACAACCTGAGATCCCAGCTGGGTTTGCACAAGTGTTTCCTGATTTTCAAGATCTGGAGTCGCTTACATCCTCAGACATGGCGTTTCTTGAGGGTCTTTAG |
Protein Sequence | MQPSSPSTAHSTQVPIKVQHRIAKKKNLRRRRIDLGCGCSVYVSLDCANYGFTHRDHHYCSSGAEWRVYLDSTKSPLFQNHQARSTVIQQRSGRDNITDTVQPQPEIPAGFAQVFPDFQDLESLTSSDMAFLEGL |
NCBI Accession | YP_009664846.1 |
---|---|
Location | 1518-2606 |
Gene Name | C1 |
Protein Name | replication-associated protein |
Coding Region | ATGCCTACTCCAAATCGTTTTAAAATAAATGCGAAAAACTTTTTTCTCACATATCCACACTGCTCTCTTACAAAAGAGGAAGCACTCTCGCAGATCAAACAACTCCAAACCCCAACAAATAAATTGTTTATACGAATCTGTCGTGAACTGCACGAAGATGGGAGCCCTCATCTCCACGTCCTCATCCAGTTCGAAGGCAAATACACCTGCAGAAATCAAAGATTCTTCGATCTCGTTTCCCCAAACAGATCAGCACATTTCCATCCGAACATTCAGGCGGCTAAAAGCTCGTCAGATGTCAAGACCTACATGGAGAAAGACGGAGACATCCTTGATTCTGGAGTTTTCCAAGTCGATGGACGATCAGCTAGAGGAGGTTGCCAAAATGCCAACGACGCATATGCCGAGGCAATCAACTCAGGATCTAAGTCATCGGCACTCAATATATTAAGGGAGAAAGCTCCCAAAGATTATGTTTTACAGTTTCATAATTTAAATAGCAATTTAGATAGGATTTTTGCTCCTCCGTTGGAGGTTTTTGTTTGTCCTTTTTCTAGTTCTTCATTTGATCAAGTTCCTGAGGAAATTGAGGAATGGGCTGCAGAAAACGTGAAGTCTTCCGCTGCGCGGCCATGGAGACCGATGAGTATTGTGATAGAGGGTGACAGTAGGACAGGCAAGACAATGTGGGCTAGGTCATTGGGTCCTCATAACTATCTATGTGGTCATCTGGACCTGAGTCCGAAGATCTACAGCAATGGCGCATGGTACAACGTCGTTGATGATGTAGACCCCCACTATCTAAAGCATTTCAAGGAATTCATGGGGGCCCAAAGGGACTGGCAAAGCAACACGAAGTACGGGAGACCAATTCAAATTAAAGGTGGAATCCCAACAATCTTCCTCTGCAATCCAGGACCAACGTCTTCATATACGGAGTTTCTAGACGAAGAAAAGAACTCCGCATTAAAAGCCTGGGCTATAAAAAATGCAACCTTCGTCACCCTCTACAGCCCACTCTACTCAGGTGCCCATCAAAGTCCAGCACAGGATAGCCAAGAAGAAGAACCTTCGCAGGCGGAGGATTGA |
Protein Sequence | MPTPNRFKINAKNFFLTYPHCSLTKEEALSQIKQLQTPTNKLFIRICRELHEDGSPHLHVLIQFEGKYTCRNQRFFDLVSPNRSAHFHPNIQAAKSSSDVKTYMEKDGDILDSGVFQVDGRSARGGCQNANDAYAEAINSGSKSSALNILREKAPKDYVLQFHNLNSNLDRIFAPPLEVFVCPFSSSSFDQVPEEIEEWAAENVKSSAARPWRPMSIVIEGDSRTGKTMWARSLGPHNYLCGHLDLSPKIYSNGAWYNVVDDVDPHYLKHFKEFMGAQRDWQSNTKYGRPIQIKGGIPTIFLCNPGPTSSYTEFLDEEKNSALKAWAIKNATFVTLYSPLYSGAHQSPAQDSQEEEPSQAED |
NCBI Accession | YP_009664847.1 |
---|---|
Location | 2156-2578 |
Gene Name | C4 |
Protein Name | hypothetical protein |
Coding Region | ATGCGAAAAACTTTTTTCTCACATATCCACACTGCTCTCTTACAAAAGAGGAAGCACTCTCGCAGATCAAACAACTCCAAACCCCAACAAATAAATTGTTTATACGAATCTGTCGTGAACTGCACGAAGATGGGAGCCCTCATCTCCACGTCCTCATCCAGTTCGAAGGCAAATACACCTGCAGAAATCAAAGATTCTTCGATCTCGTTTCCCCAAACAGATCAGCACATTTCCATCCGAACATTCAGGCGGCTAAAAGCTCGTCAGATGTCAAGACCTACATGGAGAAAGACGGAGACATCCTTGATTCTGGAGTTTTCCAAGTCGATGGACGATCAGCTAGAGGAGGTTGCCAAAATGCCAACGACGCATATGCCGAGGCAATCAACTCAGGATCTAAGTCATCGGCACTCAATATATTAA |
Protein Sequence | MRKTFFSHIHTALLQKRKHSRRSNNSKPQQINCLYESVVNCTKMGALISTSSSSSKANTPAEIKDSSISFPQTDQHISIRTFRRLKARQMSRPTWRKTETSLILEFSKSMDDQLEEVAKMPTTHMPRQSTQDLSHRHSIY |
1 |
Funayama-Noguchi S, et al. Funct Plant Biol. 2006 Mar;33(2):165-175. doi: 10.1071/FP05172. PMID: 32689223 |
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2 |
Siegesbeckia yellow vein virus is a distinct begomovirus associated with a satellite DNA molecule. Wu JB, et al. Arch Virol. 2007;152(4):791-6. doi: 10.1007/s00705-006-0896-7. Epub 2006 Dec 28. PMID: 17187292 |
3 |
Saunders K, et al. J Gen Virol. 2008 Dec;89(Pt 12):3165-3172. doi: 10.1099/vir.0.2008/003848-0. PMID: 19008407 |
4 |
Kitamura K, et al. Arch Virol. 2004 Jun;149(6):1221-9. doi: 10.1007/s00705-003-0276-5. Epub 2004 Feb 16. PMID: 15168208 |
5 |
Ueda S, et al. Arch Virol. 2008;153(3):417-26. doi: 10.1007/s00705-007-0011-8. Epub 2008 Jan 4. PMID: 18175045 |