Genus | Begomovirus |
---|---|
NCBI Assembly | GCF_000873285.1 |
Isolate | Viet Nam: Hoabinh |
Release date | 2015/2/13 |
Submitter | Ha,C., Coombs,S., Revill,P., Harding,R., Vu,M., Dale,J., Ha,C.V., Revill,P.A., Harding,R.M., Vu,M.T., Dale,J.L. |
Host | |
Vector | |
Download | Genome |GFF3 |PEP |CDS |
NCBI Accession | YP_001285748.1 |
---|---|
Location | 127-477 |
Gene Name | AV2 |
Protein Name | AV2 protein |
Coding Region | ATGTGGGATCCTTTACTAAACGAGTTCCCTGAGACCGTACATGGTTTTAGGTGTATGTTAGCAATTAAATATTTGCAACTAGTAGAAAATACATACTCTCCCGACACATTAGGTTACGACCTAATACGTGATCTCATCTTGGTGATTCGTGCTAGGGATTATGTCGAAGCGTCCCGCAGATATAGTCATTTCCACTCCCGCCTCCAAGGTTCGTCGCCGATTGAACTTCGACAGCCCATATGTCAGCCGTGCTGCTGCCCCTACTGTCCTCGTCACAAACAAAAGGAGGTCATGGGCCAACCGGCCCATGAACAGAAAGCCCAGGATCTACAGGATGTACAAAAGCCCTGA |
Protein Sequence | MWDPLLNEFPETVHGFRCMLAIKYLQLVENTYSPDTLGYDLIRDLILVIRARDYVEASRRYSHFHSRLQGSSPIELRQPICQPCCCPYCPRHKQKEVMGQPAHEQKAQDLQDVQKP |
NCBI Accession | YP_001285749.1 |
---|---|
Location | 287-1060 |
Gene Name | AV1 |
Protein Name | CP protein |
Coding Region | ATGTCGAAGCGTCCCGCAGATATAGTCATTTCCACTCCCGCCTCCAAGGTTCGTCGCCGATTGAACTTCGACAGCCCATATGTCAGCCGTGCTGCTGCCCCTACTGTCCTCGTCACAAACAAAAGGAGGTCATGGGCCAACCGGCCCATGAACAGAAAGCCCAGGATCTACAGGATGTACAAAAGCCCTGATGTTCCTCGGGGCTGTGAAGGCCCATGTAAGGTCCAGTCCTATGAACAACGTCATGATGTAGCCCATGTAGGTAAGGTAATTTGTGTCTCTGATGTCACCCGCGGTAATGGGCTGACACATCGTGTTGGTAAGAGGTTCTGTATTAAGTCTGTGTATGTGTTGGGAAAAATTTGGATGGATGAGAATATTAAGACCAAGAATCATACTAATACTGTCATGTTCTTCTTGGTTCGTGATAGGAGACCATTTGGTACTCCACAGGATTTTGGTCAGGTGTTCAACATGTATGATAATGAGCCCAGTACGGCCACCGTGAAGAACGACAATAGAGATCGATTTCAAGTCATTCGGCGTTTCCAGGCGACCGTGACGGGTGGTCAATATGCAAGCAAGGAACAGGCTATAGTTAGGAAATTCATGAAGGTCAACAACCATGTGACGTATAACCATCAAGAGGCTGCGAAGTATGATAACCACACAGAGAATGCTTTGTTATTGTATATGGCATGTACTCATGCTAGTAATCCAGTGTATGCTACTTTGAAAATCAGGATCTATTTCTATGATTCTGTTCAGAATTAA |
Protein Sequence | MSKRPADIVISTPASKVRRRLNFDSPYVSRAAAPTVLVTNKRRSWANRPMNRKPRIYRMYKSPDVPRGCEGPCKVQSYEQRHDVAHVGKVICVSDVTRGNGLTHRVGKRFCIKSVYVLGKIWMDENIKTKNHTNTVMFFLVRDRRPFGTPQDFGQVFNMYDNEPSTATVKNDNRDRFQVIRRFQATVTGGQYASKEQAIVRKFMKVNNHVTYNHQEAAKYDNHTENALLLYMACTHASNPVYATLKIRIYFYDSVQN |
NCBI Accession | YP_001285750.1 |
---|---|
Location | 1057-1461 |
Gene Name | AC3 |
Protein Name | REn protein |
Coding Region | ATGGATTCACGCACAGGGGAACCCATCACTGCAGCTCAAGGAGAGAATGGCGTATATATCTGGACGGTCAACAATCCCCTGTATTTCAAAATAACACAACACCACGAGAGGCCATTCATGATGAAACACGACGTAATCACAGTGCAGGTCCAGTTCAACTACAACCTGAGGAAAGCGTTGGGGATACACAAATGTTTTCTAATCTGCCAAATCTGGACTCGTTTACGTCCTCAGACCTCGCGTTTCTTAAGAGTATTTAAATATCAATGTATGAAATATTTAGACATGTTAGGAGTAATTAGCATCAACAATGTAATTAGAGCAATTAATCATGTATTGTACAATGTATTGGAAGGCACAATTGATGCACATCTCTCAAATATAATAAAATTCAACATTTATTAA |
Protein Sequence | MDSRTGEPITAAQGENGVYIWTVNNPLYFKITQHHERPFMMKHDVITVQVQFNYNLRKALGIHKCFLICQIWTRLRPQTSRFLRVFKYQCMKYLDMLGVISINNVIRAINHVLYNVLEGTIDAHLSNIIKFNIY |
NCBI Accession | YP_001285751.1 |
---|---|
Location | 1202-1606 |
Gene Name | AC2 |
Protein Name | TrAP protein |
Coding Region | ATGCAATCTTCGTCACCCTCGAGGGCCCACTCTACTCAGGTACCCATCAAAGTGCGACACAGAATCGCCAAGAAGACAACTAGAAGAAGACGAGTTGATCTCCCTTGTGGGTGTTCATTTTTCGTCGCTCTCAAGTGTCATAACCATGGATTCACGCACAGGGGAACCCATCACTGCAGCTCAAGGAGAGAATGGCGTATATATCTGGACGGTCAACAATCCCCTGTATTTCAAAATAACACAACACCACGAGAGGCCATTCATGATGAAACACGACGTAATCACAGTGCAGGTCCAGTTCAACTACAACCTGAGGAAAGCGTTGGGGATACACAAATGTTTTCTAATCTGCCAAATCTGGACTCGTTTACGTCCTCAGACCTCGCGTTTCTTAAGAGTATTTAA |
Protein Sequence | MQSSSPSRAHSTQVPIKVRHRIAKKTTRRRRVDLPCGCSFFVALKCHNHGFTHRGTHHCSSRREWRIYLDGQQSPVFQNNTTPREAIHDETRRNHSAGPVQLQPEESVGDTQMFSNLPNLDSFTSSDLAFLKSI |
NCBI Accession | YP_001285752.1 |
---|---|
Location | 1524-2594 |
Gene Name | AC1 |
Protein Name | rep protein |
Coding Region | ATGCCTCCTCCTAATAAATTCAGAATAAATGCCAAAAACTATTTCCTCACATATCCACGCTGTTCTCTTACCAAAGAGGAGGCACTTTCCCAAATTAAAGCCCTAGAAACACCAATTTCTAAATTATTCATCAGAATCTGCAGGGAACTCCACGAAGATGGAACTCCTCACCTGCATATCCTCATCCAATTCGAAGGGAAATTCCAGTGTAAAAATCAAAGATTCTTCGATCTCATATCCCCAACCAGGTCAGCACATTTCCATCCAAACATTCAGGGAGCTAAAAGCTCATCAGATGTTAAATCATACATGGAAAAAGACGGAGACGTGCTTGATCATGGAATTTTCCAGATCGATGGACGATCGGCTAGAGGAGGTTGCCAATCTGCCAACGACGCATATGCCGAGGCACTCAATTCAGGGGCCAAAGCATCGGCCCTCAATATATTAAGGGAGAAAGCTCCCAAAGATTTTGTTTTACAGTTCCATAATTTAAATAATAATTTAGATAGGATTTTTACTCATCCAATAGAAATTTACATTTCTCCTTTTTGTTCTTCTTCATTCGACCAAGTTCCAGAGGAACTTAATGAATGGGTTTCCGCAAACGTTGTCAATGCCGCTGCGCGGCCATTAAGACCGATAAGTATTGTGGTAGAGGGCGATAGTAGGACAGGGAAGACGATATGGGCCAGGTCTTTGGGACCACATAACTACTTATGCGGACATTTAGATTTAAGTCCAAAAGTGTACAACAACAGTGCCTGGTATAACGTCATTGATGACGTCGATCCCCACTATCTAAAGCACTTTAAAGAGTTCATGGGGGCCCAAAGAGACTGGCAAAGCAACACCAAATACGGGAAGCCAGTTCAAATTAAAGGGGGTATTCCCACTATCTTCCTCTGCAATCCAGGACCACATTCCAGCTATAAAGAGTTCTTGGATGAAGAAAAGAACAGCGCACTTAAAAATTGGGCTGTAAAGAATGCAATCTTCGTCACCCTCGAGGGCCCACTCTACTCAGGTACCCATCAAAGTGCGACACAGAATCGCCAAGAAGACAACTAG |
Protein Sequence | MPPPNKFRINAKNYFLTYPRCSLTKEEALSQIKALETPISKLFIRICRELHEDGTPHLHILIQFEGKFQCKNQRFFDLISPTRSAHFHPNIQGAKSSSDVKSYMEKDGDVLDHGIFQIDGRSARGGCQSANDAYAEALNSGAKASALNILREKAPKDFVLQFHNLNNNLDRIFTHPIEIYISPFCSSSFDQVPEELNEWVSANVVNAAARPLRPISIVVEGDSRTGKTIWARSLGPHNYLCGHLDLSPKVYNNSAWYNVIDDVDPHYLKHFKEFMGAQRDWQSNTKYGKPVQIKGGIPTIFLCNPGPHSSYKEFLDEEKNSALKNWAVKNAIFVTLEGPLYSGTHQSATQNRQEDN |
NCBI Accession | YP_001285753.1 |
---|---|
Location | 2144-2437 |
Gene Name | AC4 |
Protein Name | AC4 protein |
Coding Region | ATGGAACTCCTCACCTGCATATCCTCATCCAATTCGAAGGGAAATTCCAGTGTAAAAATCAAAGATTCTTCGATCTCATATCCCCAACCAGGTCAGCACATTTCCATCCAAACATTCAGGGAGCTAAAAGCTCATCAGATGTTAAATCATACATGGAAAAAGACGGAGACGTGCTTGATCATGGAATTTTCCAGATCGATGGACGATCGGCTAGAGGAGGTTGCCAATCTGCCAACGACGCATATGCCGAGGCACTCAATTCAGGGGCCAAAGCATCGGCCCTCAATATATTAA |
Protein Sequence | MELLTCISSSNSKGNSSVKIKDSSISYPQPGQHISIQTFRELKAHQMLNHTWKKTETCLIMEFSRSMDDRLEEVANLPTTHMPRHSIQGPKHRPSIY |
1 |
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9 |
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10 |
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