Genus | Begomovirus |
---|---|
NCBI Assembly | GCF_000873285.1 |
Isolate | Viet Nam: Hoabinh |
Release date | 2015/2/13 |
Submitter | Ha,C., Coombs,S., Revill,P., Harding,R., Vu,M., Dale,J., Ha,C.V., Revill,P.A., Harding,R.M., Vu,M.T., Dale,J.L. |
Host | |
Vector | |
Download | Genome |GFF3 |PEP |CDS |
NCBI Accession | YP_001285748.1 |
---|---|
Location | 127-477 |
Gene Name | AV2 |
Protein Name | AV2 protein |
Coding Region | ATGTGGGATCCTTTACTAAACGAGTTCCCTGAGACCGTACATGGTTTTAGGTGTATGTTAGCAATTAAATATTTGCAACTAGTAGAAAATACATACTCTCCCGACACATTAGGTTACGACCTAATACGTGATCTCATCTTGGTGATTCGTGCTAGGGATTATGTCGAAGCGTCCCGCAGATATAGTCATTTCCACTCCCGCCTCCAAGGTTCGTCGCCGATTGAACTTCGACAGCCCATATGTCAGCCGTGCTGCTGCCCCTACTGTCCTCGTCACAAACAAAAGGAGGTCATGGGCCAACCGGCCCATGAACAGAAAGCCCAGGATCTACAGGATGTACAAAAGCCCTGA |
Protein Sequence | MWDPLLNEFPETVHGFRCMLAIKYLQLVENTYSPDTLGYDLIRDLILVIRARDYVEASRRYSHFHSRLQGSSPIELRQPICQPCCCPYCPRHKQKEVMGQPAHEQKAQDLQDVQKP |
NCBI Accession | YP_001285749.1 |
---|---|
Location | 287-1060 |
Gene Name | AV1 |
Protein Name | CP protein |
Coding Region | ATGTCGAAGCGTCCCGCAGATATAGTCATTTCCACTCCCGCCTCCAAGGTTCGTCGCCGATTGAACTTCGACAGCCCATATGTCAGCCGTGCTGCTGCCCCTACTGTCCTCGTCACAAACAAAAGGAGGTCATGGGCCAACCGGCCCATGAACAGAAAGCCCAGGATCTACAGGATGTACAAAAGCCCTGATGTTCCTCGGGGCTGTGAAGGCCCATGTAAGGTCCAGTCCTATGAACAACGTCATGATGTAGCCCATGTAGGTAAGGTAATTTGTGTCTCTGATGTCACCCGCGGTAATGGGCTGACACATCGTGTTGGTAAGAGGTTCTGTATTAAGTCTGTGTATGTGTTGGGAAAAATTTGGATGGATGAGAATATTAAGACCAAGAATCATACTAATACTGTCATGTTCTTCTTGGTTCGTGATAGGAGACCATTTGGTACTCCACAGGATTTTGGTCAGGTGTTCAACATGTATGATAATGAGCCCAGTACGGCCACCGTGAAGAACGACAATAGAGATCGATTTCAAGTCATTCGGCGTTTCCAGGCGACCGTGACGGGTGGTCAATATGCAAGCAAGGAACAGGCTATAGTTAGGAAATTCATGAAGGTCAACAACCATGTGACGTATAACCATCAAGAGGCTGCGAAGTATGATAACCACACAGAGAATGCTTTGTTATTGTATATGGCATGTACTCATGCTAGTAATCCAGTGTATGCTACTTTGAAAATCAGGATCTATTTCTATGATTCTGTTCAGAATTAA |
Protein Sequence | MSKRPADIVISTPASKVRRRLNFDSPYVSRAAAPTVLVTNKRRSWANRPMNRKPRIYRMYKSPDVPRGCEGPCKVQSYEQRHDVAHVGKVICVSDVTRGNGLTHRVGKRFCIKSVYVLGKIWMDENIKTKNHTNTVMFFLVRDRRPFGTPQDFGQVFNMYDNEPSTATVKNDNRDRFQVIRRFQATVTGGQYASKEQAIVRKFMKVNNHVTYNHQEAAKYDNHTENALLLYMACTHASNPVYATLKIRIYFYDSVQN |
NCBI Accession | YP_001285750.1 |
---|---|
Location | 1057-1461 |
Gene Name | AC3 |
Protein Name | REn protein |
Coding Region | ATGGATTCACGCACAGGGGAACCCATCACTGCAGCTCAAGGAGAGAATGGCGTATATATCTGGACGGTCAACAATCCCCTGTATTTCAAAATAACACAACACCACGAGAGGCCATTCATGATGAAACACGACGTAATCACAGTGCAGGTCCAGTTCAACTACAACCTGAGGAAAGCGTTGGGGATACACAAATGTTTTCTAATCTGCCAAATCTGGACTCGTTTACGTCCTCAGACCTCGCGTTTCTTAAGAGTATTTAAATATCAATGTATGAAATATTTAGACATGTTAGGAGTAATTAGCATCAACAATGTAATTAGAGCAATTAATCATGTATTGTACAATGTATTGGAAGGCACAATTGATGCACATCTCTCAAATATAATAAAATTCAACATTTATTAA |
Protein Sequence | MDSRTGEPITAAQGENGVYIWTVNNPLYFKITQHHERPFMMKHDVITVQVQFNYNLRKALGIHKCFLICQIWTRLRPQTSRFLRVFKYQCMKYLDMLGVISINNVIRAINHVLYNVLEGTIDAHLSNIIKFNIY |
NCBI Accession | YP_001285751.1 |
---|---|
Location | 1202-1606 |
Gene Name | AC2 |
Protein Name | TrAP protein |
Coding Region | ATGCAATCTTCGTCACCCTCGAGGGCCCACTCTACTCAGGTACCCATCAAAGTGCGACACAGAATCGCCAAGAAGACAACTAGAAGAAGACGAGTTGATCTCCCTTGTGGGTGTTCATTTTTCGTCGCTCTCAAGTGTCATAACCATGGATTCACGCACAGGGGAACCCATCACTGCAGCTCAAGGAGAGAATGGCGTATATATCTGGACGGTCAACAATCCCCTGTATTTCAAAATAACACAACACCACGAGAGGCCATTCATGATGAAACACGACGTAATCACAGTGCAGGTCCAGTTCAACTACAACCTGAGGAAAGCGTTGGGGATACACAAATGTTTTCTAATCTGCCAAATCTGGACTCGTTTACGTCCTCAGACCTCGCGTTTCTTAAGAGTATTTAA |
Protein Sequence | MQSSSPSRAHSTQVPIKVRHRIAKKTTRRRRVDLPCGCSFFVALKCHNHGFTHRGTHHCSSRREWRIYLDGQQSPVFQNNTTPREAIHDETRRNHSAGPVQLQPEESVGDTQMFSNLPNLDSFTSSDLAFLKSI |
NCBI Accession | YP_001285752.1 |
---|---|
Location | 1524-2594 |
Gene Name | AC1 |
Protein Name | rep protein |
Coding Region | ATGCCTCCTCCTAATAAATTCAGAATAAATGCCAAAAACTATTTCCTCACATATCCACGCTGTTCTCTTACCAAAGAGGAGGCACTTTCCCAAATTAAAGCCCTAGAAACACCAATTTCTAAATTATTCATCAGAATCTGCAGGGAACTCCACGAAGATGGAACTCCTCACCTGCATATCCTCATCCAATTCGAAGGGAAATTCCAGTGTAAAAATCAAAGATTCTTCGATCTCATATCCCCAACCAGGTCAGCACATTTCCATCCAAACATTCAGGGAGCTAAAAGCTCATCAGATGTTAAATCATACATGGAAAAAGACGGAGACGTGCTTGATCATGGAATTTTCCAGATCGATGGACGATCGGCTAGAGGAGGTTGCCAATCTGCCAACGACGCATATGCCGAGGCACTCAATTCAGGGGCCAAAGCATCGGCCCTCAATATATTAAGGGAGAAAGCTCCCAAAGATTTTGTTTTACAGTTCCATAATTTAAATAATAATTTAGATAGGATTTTTACTCATCCAATAGAAATTTACATTTCTCCTTTTTGTTCTTCTTCATTCGACCAAGTTCCAGAGGAACTTAATGAATGGGTTTCCGCAAACGTTGTCAATGCCGCTGCGCGGCCATTAAGACCGATAAGTATTGTGGTAGAGGGCGATAGTAGGACAGGGAAGACGATATGGGCCAGGTCTTTGGGACCACATAACTACTTATGCGGACATTTAGATTTAAGTCCAAAAGTGTACAACAACAGTGCCTGGTATAACGTCATTGATGACGTCGATCCCCACTATCTAAAGCACTTTAAAGAGTTCATGGGGGCCCAAAGAGACTGGCAAAGCAACACCAAATACGGGAAGCCAGTTCAAATTAAAGGGGGTATTCCCACTATCTTCCTCTGCAATCCAGGACCACATTCCAGCTATAAAGAGTTCTTGGATGAAGAAAAGAACAGCGCACTTAAAAATTGGGCTGTAAAGAATGCAATCTTCGTCACCCTCGAGGGCCCACTCTACTCAGGTACCCATCAAAGTGCGACACAGAATCGCCAAGAAGACAACTAG |
Protein Sequence | MPPPNKFRINAKNYFLTYPRCSLTKEEALSQIKALETPISKLFIRICRELHEDGTPHLHILIQFEGKFQCKNQRFFDLISPTRSAHFHPNIQGAKSSSDVKSYMEKDGDVLDHGIFQIDGRSARGGCQSANDAYAEALNSGAKASALNILREKAPKDFVLQFHNLNNNLDRIFTHPIEIYISPFCSSSFDQVPEELNEWVSANVVNAAARPLRPISIVVEGDSRTGKTIWARSLGPHNYLCGHLDLSPKVYNNSAWYNVIDDVDPHYLKHFKEFMGAQRDWQSNTKYGKPVQIKGGIPTIFLCNPGPHSSYKEFLDEEKNSALKNWAVKNAIFVTLEGPLYSGTHQSATQNRQEDN |
NCBI Accession | YP_001285753.1 |
---|---|
Location | 2144-2437 |
Gene Name | AC4 |
Protein Name | AC4 protein |
Coding Region | ATGGAACTCCTCACCTGCATATCCTCATCCAATTCGAAGGGAAATTCCAGTGTAAAAATCAAAGATTCTTCGATCTCATATCCCCAACCAGGTCAGCACATTTCCATCCAAACATTCAGGGAGCTAAAAGCTCATCAGATGTTAAATCATACATGGAAAAAGACGGAGACGTGCTTGATCATGGAATTTTCCAGATCGATGGACGATCGGCTAGAGGAGGTTGCCAATCTGCCAACGACGCATATGCCGAGGCACTCAATTCAGGGGCCAAAGCATCGGCCCTCAATATATTAA |
Protein Sequence | MELLTCISSSNSKGNSSVKIKDSSISYPQPGQHISIQTFRELKAHQMLNHTWKKTETCLIMEFSRSMDDRLEEVANLPTTHMPRHSIQGPKHRPSIY |
1 |
Wheat yellow mosaic virus NIb targets TaVTC2 to elicit broad-spectrum pathogen resistance in wheat. Zhang T, et al. Plant Biotechnol J. 2023 May;21(5):1073-1088. doi: 10.1111/pbi.14019. Epub 2023 Feb 14. PMID: 36715229 |
---|---|
2 |
Zechmann B, et al. Protoplasma. 2021 Nov;258(6):1201-1211. doi: 10.1007/s00709-021-01626-0. Epub 2021 Feb 22. PMID: 33619654 |
3 |
Dokka N, et al. Plant Dis. 2023 Oct;107(10):2924-2928. doi: 10.1094/PDIS-06-22-1473-SC. Epub 2023 Oct 11. PMID: 36890129 |
4 |
Australian Cool-Season Pulse Seed-Borne Virus Research: 2. Bean Yellow Mosaic Virus. Jones RAC. Viruses. 2025 May 3;17(5):668. doi: 10.3390/v17050668. PMID: 40431680 |
5 |
Kuruba BL, et al. Acta Virol. 2016;60(3):224-33. doi: 10.4149/av_2016_03_224. PMID: 27640432 |
6 |
Berbati M, et al. J Virol Methods. 2023 Nov;321:114805. doi: 10.1016/j.jviromet.2023.114805. Epub 2023 Sep 4. PMID: 37673287 |
7 |
Structure of turnip yellow mosaic virus. KLUG A, et al. Nature. 1957 Mar 30;179(4561):683-4. doi: 10.1038/179683b0. PMID: 13418768 |
8 |
Kan J, et al. Plant Biotechnol J. 2023 May;21(5):893-895. doi: 10.1111/pbi.14002. Epub 2023 Jan 24. PMID: 36628413 |
9 |
Jin J, et al. J Appl Microbiol. 2017 May;122(5):1299-1309. doi: 10.1111/jam.13422. PMID: 28208239 |
10 |
Chen D, et al. Plant J. 2023 Dec;116(6):1717-1736. doi: 10.1111/tpj.16461. Epub 2023 Sep 26. PMID: 37751381 |