Emilia yellow vein virus


Basic Information

Genus Begomovirus
NCBI Assembly GCF_000879075.1
Isolate China
Release date 2015/2/22
Submitter Yang,C.X., Wu,Z.J.
Host
Vector
Download Genome |GFF3 |PEP |CDS

Genomic Organization


JBrowse


Genome

NC_010307
ACCGGATGGCCGCGATTTTTTTTTGACCCCACCACTTTTTATCCCAGCCGTCCATCAATACTTAATTATTAAGTAATACATTATAAAGATTGGTCCCCACGTTTCCACATCAGAAAATGTGGGATCCGCTACTAAACGAATTTCCCGATACGGTTCATGGTTTTCGTTGTATGCTTGCAAATAAATATTTATTGTGTATAGCGGATACGTATTCTCCAGATACACTTGGATACGATTTAATTAGGGATTTAATATCTGTAATTAGGGCTCGTGATTATGGCGAAGCGACCAGGAGATATAGTCATTTCCACTCCCGTTTCGAAGGTACGTCGACGACTGAACTTCGACAGCCCATATACTCGCCGTGCTGCTGTCCCCACTGTCCGCGTCACCAGAAGACAGATATGGACCAACAGGCCCATGTATCGAAAGCCCAAAATTTACAGAATGACAAGAAGCCCTGATGTGCCTAGGGGCTGTGAAGGCCCATGTAAGGTCCAGTCATTTGAACAACGTCATGATATAGCCCATACAGGGAAAGTTATATGTATATCCGATATTACACGTGGTAATGGTCTGACACATCGTGTTGGAAAGAGATTTTGTATCAAATCAACTTATATTTTGGGTAAAGTTTGGATGGATGAAAATATTAAGACCAAGAATCACACTAATACGGTGATGTTCTATGTTGTTAGAGATAGACGTCCATTTGGAACTCCAATGGATTTTGGACAAGTCTTTAATATGTATGATAATGAGCCTAGTACTGCTACTATCAAAAATGACCTTAGGGATAGATATCAGGTATTACGAAAGTTCTGGGCTACGGTTACAGGTGGACAGTATGCCAGTAAGGAACAAGCCATGGTTGCCAAGTTTATGAAGCTTAATAATTATGTGTGTTATAATCATCAAGAAGCAGCTAAGTATGAGAATCATACTGAAAATGCTTTGTTATTGTATATGGCATGTACTCATGCCTCTAATCCTGTGTATGCTACTTTGAAGATACGGATCTATTCTATGATTCGATATCAAATTAATAAGAATTGAATTTTATTATTTCATATTGTTTTACATACATTGTTCCTTCTAATACATTGTGTAATACATGATCAACTGCTCTAATTACAAAATTTAAAGAAACTATTCCTAAATTATTCAAGTATTTCAATACTTGATTTTTAAATACTCTTAAGAAATGCGATGTCGCTGGTTGTAAGTGAGTCCATATCTGGAATGTCAAGAAACACTTGTGAATTCCCAATGCTTTCCTCAGGTTGTAGTTGAATTGGATCCTTATCTCTATTTCGTCCCTGTTCGTGTTGAATGGTCTGTTGAGGTGTTTTAGGATCTTGAAATATAGGGGATTTGGCACCTCCCAGATATATACGCCATTCGTCGCTTGAGCTGCAGTGATGGGTTCCCCGGTGTGTGAATCCATGATTGTGGCAGTTGATTGATTTGTAAATTGAACACCCACAAGGGAGGTCAATTCTCTTTCTTCTAATTGATTTGGCTTTTGCAGCCTTATGAAGCACTTTGATTGGAATTTGTGAAGAGTGGCTCCCAGAGGGTGACAAAGGTCGCATTTTTATGGGACCACTCCTTTAGGGCTTTGTTTTTTTCCTCGTCTAGATATTCTGTATATGACGAGGTAGGACCTGGGATTGCAGAGGAAGATTGTTGGAATGCCACCTTTAATTTGAATTGGCTTCCCGTACTTGGGTATTGCTTTGGCAGTCCCTTTGGGCCCCCATAAATTCTTTAAAGTGCTTAGGTAGTGCGGGTCTACGTCATCAATGACGTTGTACCAGGCATCGTTGCTGTATACTTTTGGACTGAGGTCTAAATGACCACATAGGTAGTTATGTGGACCTAGTGACCTGGCCCACATTGTTTTTCCAGTCCTGCTGTCACCTTCTATTACGATGCTAATGGGCCTCCATGGCCGCGCAGCGGCGTCCTTTATATTTTCCGACACCCAGGATTTAAGTTCTTCTGGAACTTGATTAAAAGAAGAAGAAGAGAATGGACAATTAAAAACCTCCATAGGAGGTGCAAAAATCCTATCTAAATTACTATTTAAATTATGAAATTGTAAAACAAAATCTTTGGGAGCTTTCTCCCTTAGTATATTGAGGGCCGTAGCTTTTGACCCTGAATTGATTGCCTCGGCATATGCGTCGTTGGCAGATTGGCAGCCTCCTCTAGCCGATCTTCCATCGATCTGGAAAGATCCATGATCAAGTACATCTCCGTCTTTCTCCATGTAGGTTTTGACATCTGTTGAGCTTTTAGCTCCCTGAATGTTCGGATGGAAATGTGCTGACCTATTTGGGGATATGAGATCGAAGAATCTGTTGTTTTGGCATTTGAATTTGCCTTCGAATTGGATGAGAACATGCAGGTGAGGAGTCCCATCTTCATGTAATTCTCTGCAAATTCGAATGAATAATTTATTTGTTGGGGTTGATAATTTAGTTATTTGGGAAAGTGCTTCTTCTTTTGTGAGTGAGCAGTGAGGGTATGTTAGGAAATAATTTTTTGCATTTATTAAAAATCGTTTTGGTGGTGACATGTTGACTTGGTCAATCGGGTCCTCTCAAACTATGGCAAGCAATTGGGGAATGGGTCTCAATATATAGGTGAGGACCTAAATGGCATTATTGTAATTTCTTAAAGAAATTCAAATTCCAAAAGCGGCCATCCGTATAATATT

Gene Information

NCBI Accession YP_001661457.1
Location 117-464
Gene Name AV2
Protein Name AV2
Coding Region ATGTGGGATCCGCTACTAAACGAATTTCCCGATACGGTTCATGGTTTTCGTTGTATGCTTGCAAATAAATATTTATTGTGTATAGCGGATACGTATTCTCCAGATACACTTGGATACGATTTAATTAGGGATTTAATATCTGTAATTAGGGCTCGTGATTATGGCGAAGCGACCAGGAGATATAGTCATTTCCACTCCCGTTTCGAAGGTACGTCGACGACTGAACTTCGACAGCCCATATACTCGCCGTGCTGCTGTCCCCACTGTCCGCGTCACCAGAAGACAGATATGGACCAACAGGCCCATGTATCGAAAGCCCAAAATTTACAGAATGACAAGAAGCCCTGA
Protein Sequence MWDPLLNEFPDTVHGFRCMLANKYLLCIADTYSPDTLGYDLIRDLISVIRARDYGEATRRYSHFHSRFEGTSTTELRQPIYSPCCCPHCPRHQKTDMDQQAHVSKAQNLQNDKKP

NCBI Accession YP_001661458.1
Location 277-1056
Gene Name AV1
Protein Name AV1
Coding Region ATGGCGAAGCGACCAGGAGATATAGTCATTTCCACTCCCGTTTCGAAGGTACGTCGACGACTGAACTTCGACAGCCCATATACTCGCCGTGCTGCTGTCCCCACTGTCCGCGTCACCAGAAGACAGATATGGACCAACAGGCCCATGTATCGAAAGCCCAAAATTTACAGAATGACAAGAAGCCCTGATGTGCCTAGGGGCTGTGAAGGCCCATGTAAGGTCCAGTCATTTGAACAACGTCATGATATAGCCCATACAGGGAAAGTTATATGTATATCCGATATTACACGTGGTAATGGTCTGACACATCGTGTTGGAAAGAGATTTTGTATCAAATCAACTTATATTTTGGGTAAAGTTTGGATGGATGAAAATATTAAGACCAAGAATCACACTAATACGGTGATGTTCTATGTTGTTAGAGATAGACGTCCATTTGGAACTCCAATGGATTTTGGACAAGTCTTTAATATGTATGATAATGAGCCTAGTACTGCTACTATCAAAAATGACCTTAGGGATAGATATCAGGTATTACGAAAGTTCTGGGCTACGGTTACAGGTGGACAGTATGCCAGTAAGGAACAAGCCATGGTTGCCAAGTTTATGAAGCTTAATAATTATGTGTGTTATAATCATCAAGAAGCAGCTAAGTATGAGAATCATACTGAAAATGCTTTGTTATTGTATATGGCATGTACTCATGCCTCTAATCCTGTGTATGCTACTTTGAAGATACGGATCTATTCTATGATTCGATATCAAATTAATAAGAATTGA
Protein Sequence MAKRPGDIVISTPVSKVRRRLNFDSPYTRRAAVPTVRVTRRQIWTNRPMYRKPKIYRMTRSPDVPRGCEGPCKVQSFEQRHDIAHTGKVICISDITRGNGLTHRVGKRFCIKSTYILGKVWMDENIKTKNHTNTVMFYVVRDRRPFGTPMDFGQVFNMYDNEPSTATIKNDLRDRYQVLRKFWATVTGGQYASKEQAMVAKFMKLNNYVCYNHQEAAKYENHTENALLLYMACTHASNPVYATLKIRIYSMIRYQINKN

NCBI Accession YP_001661459.1
Location 1043-1447
Gene Name AC3
Protein Name AC3
Coding Region ATGGATTCACACACCGGGGAACCCATCACTGCAGCTCAAGCGACGAATGGCGTATATATCTGGGAGGTGCCAAATCCCCTATATTTCAAGATCCTAAAACACCTCAACAGACCATTCAACACGAACAGGGACGAAATAGAGATAAGGATCCAATTCAACTACAACCTGAGGAAAGCATTGGGAATTCACAAGTGTTTCTTGACATTCCAGATATGGACTCACTTACAACCAGCGACATCGCATTTCTTAAGAGTATTTAAAAATCAAGTATTGAAATACTTGAATAATTTAGGAATAGTTTCTTTAAATTTTGTAATTAGAGCAGTTGATCATGTATTACACAATGTATTAGAAGGAACAATGTATGTAAAACAATATGAAATAATAAAATTCAATTCTTATTAA
Protein Sequence MDSHTGEPITAAQATNGVYIWEVPNPLYFKILKHLNRPFNTNRDEIEIRIQFNYNLRKALGIHKCFLTFQIWTHLQPATSHFLRVFKNQVLKYLNNLGIVSLNFVIRAVDHVLHNVLEGTMYVKQYEIIKFNSY

NCBI Accession YP_001661460.1
Location 1188-1595
Gene Name AC2
Protein Name AC2
Coding Region ATGCGACCTTTGTCACCCTCTGGGAGCCACTCTTCACAAATTCCAATCAAAGTGCTTCATAAGGCTGCAAAAGCCAAATCAATTAGAAGAAAGAGAATTGACCTCCCTTGTGGGTGTTCAATTTACAAATCAATCAACTGCCACAATCATGGATTCACACACCGGGGAACCCATCACTGCAGCTCAAGCGACGAATGGCGTATATATCTGGGAGGTGCCAAATCCCCTATATTTCAAGATCCTAAAACACCTCAACAGACCATTCAACACGAACAGGGACGAAATAGAGATAAGGATCCAATTCAACTACAACCTGAGGAAAGCATTGGGAATTCACAAGTGTTTCTTGACATTCCAGATATGGACTCACTTACAACCAGCGACATCGCATTTCTTAAGAGTATTTAA
Protein Sequence MRPLSPSGSHSSQIPIKVLHKAAKAKSIRRKRIDLPCGCSIYKSINCHNHGFTHRGTHHCSSSDEWRIYLGGAKSPIFQDPKTPQQTIQHEQGRNRDKDPIQLQPEESIGNSQVFLDIPDMDSLTTSDIAFLKSI

NCBI Accession YP_001661461.1
Location 1598-2584
Gene Name AC1
Protein Name AC1
Coding Region ATGTCACCACCAAAACGATTTTTAATAAATGCAAAAAATTATTTCCTAACATACCCTCACTGCTCACTCACAAAAGAAGAAGCACTTTCCCAAATAACTAAATTATCAACCCCAACAAATAAATTATTCATTCGAATTTGCAGAGAATTACATGAAGATGGGACTCCTCACCTGCATGTTCTCATCCAATTCGAAGGCAAATTCAAATGCCAAAACAACAGATTCTTCGATCTCATATCCCCAAATAGGTCAGCACATTTCCATCCGAACATTCAGGGAGCTAAAAGCTCAACAGATGTCAAAACCTACATGGAGAAAGACGGAGATGTACTTGATCATGGATCTTTCCAGATCGATGGAAGATCGGCTAGAGGAGGCTGCCAATCTGCCAACGACGCATATGCCGAGGCAATCAATTCAGGGTCAAAAGCTACGGCCCTCAATATACTAAGGGAGAAAGCTCCCAAAGATTTTGTTTTACAATTTCATAATTTAAATAGTAATTTAGATAGGATTTTTGCACCTCCTATGGAGGTTTTTAATTGTCCATTCTCTTCTTCTTCTTTTAATCAAGTTCCAGAAGAACTTAAATCCTGGGTGTCGGAAAATATAAAGGACGCCGCTGCGCGGCCATGGAGGCCCATTAGCATCGTAATAGAAGGTGACAGCAGGACTGGAAAAACAATGTGGGCCAGGTCACTAGGTCCACATAACTACCTATGTGGTCATTTAGACCTCAGTCCAAAAGTATACAGCAACGATGCCTGGTACAACGTCATTGATGACGTAGACCCGCACTACCTAAGCACTTTAAAGAATTTATGGGGGCCCAAAGGGACTGCCAAAGCAATACCCAAGTACGGGAAGCCAATTCAAATTAAAGGTGGCATTCCAACAATCTTCCTCTGCAATCCCAGGTCCTACCTCGTCATATACAGAATATCTAGACGAGGAAAAAAACAAAGCCCTAAAGGAGTGGTCCCATAA
Protein Sequence MSPPKRFLINAKNYFLTYPHCSLTKEEALSQITKLSTPTNKLFIRICRELHEDGTPHLHVLIQFEGKFKCQNNRFFDLISPNRSAHFHPNIQGAKSSTDVKTYMEKDGDVLDHGSFQIDGRSARGGCQSANDAYAEAINSGSKATALNILREKAPKDFVLQFHNLNSNLDRIFAPPMEVFNCPFSSSSFNQVPEELKSWVSENIKDAAARPWRPISIVIEGDSRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLSTLKNLWGPKGTAKAIPKYGKPIQIKGGIPTIFLCNPRSYLVIYRISRRGKKQSPKGVVP

NCBI Accession YP_001661462.1
Location 2134-2433
Gene Name AC4
Protein Name AC4
Coding Region ATGAAGATGGGACTCCTCACCTGCATGTTCTCATCCAATTCGAAGGCAAATTCAAATGCCAAAACAACAGATTCTTCGATCTCATATCCCCAAATAGGTCAGCACATTTCCATCCGAACATTCAGGGAGCTAAAAGCTCAACAGATGTCAAAACCTACATGGAGAAAGACGGAGATGTACTTGATCATGGATCTTTCCAGATCGATGGAAGATCGGCTAGAGGAGGCTGCCAATCTGCCAACGACGCATATGCCGAGGCAATCAATTCAGGGTCAAAAGCTACGGCCCTCAATATACTAA
Protein Sequence MKMGLLTCMFSSNSKANSNAKTTDSSISYPQIGQHISIRTFRELKAQQMSKPTWRKTEMYLIMDLSRSMEDRLEEAANLPTTHMPRQSIQGQKLRPSIY

References More References in PubMed

1

Two distinct begomoviruses associated with an alphasatellite coinfecting Emilia sonchifolia in Thailand.

Zhao L, et al.  Arch Virol. 2018 Jun;163(6):1695-1699. doi: 10.1007/s00705-018-3762-5. Epub 2018 Feb 12.

PMID: 29435710

2

First Report of Strawberry vein banding virus on Strawberry in Italy.

Ratti C, et al.  Plant Dis. 2009 Jun;93(6):675. doi: 10.1094/PDIS-93-6-0675A.

PMID: 30764411

3

Molecular characterization of a distinct begomovirus species from Vernonia cinerea and its associated DNA-beta using the bacteriophage Phi 29 DNA polymerase.

Packialakshmi RM, et al.  Virus Genes. 2010 Aug;41(1):135-43. doi: 10.1007/s11262-010-0484-5. Epub 2010 Apr 17.

PMID: 20401528

4

[Molecular identification of geminivirus inducing vein yellowing in Abelmoschus manihot].

Tang MQ, et al.  Zhong Yao Cai. 2011 Feb;34(2):168-71.

PMID: 21823468

5

First Report of Broad Bean Wilt Fabavirus on Polygonum fagopyrum.

Bellardi MG, et al.  Plant Dis. 1997 Aug;81(8):959. doi: 10.1094/PDIS.1997.81.8.959A.

PMID: 30866395